data_4Y49
#
_model_server_result.job_id            ceGLY4bYx85c7NG71dZDKw 
_model_server_result.datetime_utc      '2024-11-18 13:25:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4y49 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":301}' 
#
_entry.id    4Y49 
#
_exptl.entry_id    4Y49 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              825.57 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CARBOXYMETHYL COENZYME *A' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4Y49 
_cell.length_a            111.723 
_cell.length_b            146.486 
_cell.length_c            254.107 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4Y49 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
? tetrameric 4 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,M,N,O 1 1 
E,F,G,H,P,Q,R 2 1 
I,J,K,L,S,T,U 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 N N N 
? 6 Q N N 
? 6 T N N 
#
_chem_comp.formula           'C23 H38 N7 O18 P3 S' 
_chem_comp.formula_weight    825.57 
_chem_comp.id                CMC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CARBOXYMETHYL COENZYME *A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1A C2A CMC sing 161 n y 
N1A C6A CMC doub 162 n y 
C2A N3A CMC doub 163 n y 
C2A H2A CMC sing 164 n n 
N3A C4A CMC sing 165 n y 
C4A C5A CMC doub 166 n y 
C4A N9A CMC sing 167 n y 
C5A C6A CMC sing 168 n y 
C5A N7A CMC sing 169 n y 
C6A N6A CMC sing 170 n n 
N6A H61A CMC sing 171 n n 
N6A H62A CMC sing 172 n n 
N7A C8A CMC doub 173 n y 
C8A N9A CMC sing 174 n y 
C8A H8A CMC sing 175 n n 
N9A C1B CMC sing 176 n n 
C1B C2B CMC sing 177 n n 
C1B O4B CMC sing 178 n n 
C1B H1B CMC sing 179 n n 
C2B O2B CMC sing 180 n n 
C2B C3B CMC sing 181 n n 
C2B H2B CMC sing 182 n n 
O2B HO2A CMC sing 183 n n 
C3B O3B CMC sing 184 n n 
C3B C4B CMC sing 185 n n 
C3B H3B CMC sing 186 n n 
O3B P3B CMC sing 187 n n 
P3B O7A CMC doub 188 n n 
P3B O8A CMC sing 189 n n 
P3B O9A CMC sing 190 n n 
O8A HOA8 CMC sing 191 n n 
O9A HOA9 CMC sing 192 n n 
C4B O4B CMC sing 193 n n 
C4B C5B CMC sing 194 n n 
C4B H4B CMC sing 195 n n 
C5B O5B CMC sing 196 n n 
C5B H51A CMC sing 197 n n 
C5B H52A CMC sing 198 n n 
O5B P1A CMC sing 199 n n 
P1A O1A CMC doub 200 n n 
P1A O2A CMC sing 201 n n 
P1A O3A CMC sing 202 n n 
O2A HOA2 CMC sing 203 n n 
O3A P2A CMC sing 204 n n 
P2A O4A CMC doub 205 n n 
P2A O5A CMC sing 206 n n 
P2A O6A CMC sing 207 n n 
O5A HOA5 CMC sing 208 n n 
O6A CCP CMC sing 209 n n 
CBP CCP CMC sing 210 n n 
CBP CDP CMC sing 211 n n 
CBP CEP CMC sing 212 n n 
CBP CAP CMC sing 213 n n 
CCP H121 CMC sing 214 n n 
CCP H122 CMC sing 215 n n 
CDP H131 CMC sing 216 n n 
CDP H132 CMC sing 217 n n 
CDP H133 CMC sing 218 n n 
CEP H141 CMC sing 219 n n 
CEP H142 CMC sing 220 n n 
CEP H143 CMC sing 221 n n 
CAP OAP CMC sing 222 n n 
CAP C9P CMC sing 223 n n 
CAP H10 CMC sing 224 n n 
OAP HO1 CMC sing 225 n n 
C9P O9P CMC doub 226 n n 
C9P N8P CMC sing 227 n n 
N8P C7P CMC sing 228 n n 
N8P HN8 CMC sing 229 n n 
C7P C6P CMC sing 230 n n 
C7P H71 CMC sing 231 n n 
C7P H72 CMC sing 232 n n 
C6P C5P CMC sing 233 n n 
C6P H61 CMC sing 234 n n 
C6P H62 CMC sing 235 n n 
C5P O5P CMC doub 236 n n 
C5P N4P CMC sing 237 n n 
N4P C3P CMC sing 238 n n 
N4P HN4 CMC sing 239 n n 
C3P C2P CMC sing 240 n n 
C3P H31 CMC sing 241 n n 
C3P H32 CMC sing 242 n n 
C2P S1P CMC sing 243 n n 
C2P H21 CMC sing 244 n n 
C2P H22 CMC sing 245 n n 
S1P C1 CMC sing 246 n n 
C1 C2 CMC sing 247 n n 
C1 H11 CMC sing 248 n n 
C1 H12 CMC sing 249 n n 
C2 O21 CMC doub 250 n n 
C2 O22 CMC sing 251 n n 
O22 HO22 CMC sing 252 n n 
#
_atom_sites.entry_id                     4Y49 
_atom_sites.fract_transf_matrix[1][1]    0.008951 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006827 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003935 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 5 G4P A 1 901 1 G4P G4P . 
N 6 CMC B 1 301 1 CMC ACO . 
O 7 ACO C 1 201 1 ACO BCO . 
P 5 G4P G 1 901 2 G4P G4P . 
Q 6 CMC H 1 301 1 CMC ACO . 
R 7 ACO I 1 201 1 ACO BCO . 
S 5 G4P M 1 901 3 G4P G4P . 
T 6 CMC N 1 301 1 CMC ACO . 
U 7 ACO O 1 201 1 ACO BCO . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1A CMC . . . N 6 -5.609 66.761 553.177 0 20 ? N1A CMC 301 B 1 
HETATM 2 C C2A CMC . . . N 6 -6.093 66.136 554.261 0 20 ? C2A CMC 301 B 1 
HETATM 3 N N3A CMC . . . N 6 -6.957 65.112 554.178 0 20 ? N3A CMC 301 B 1 
HETATM 4 C C4A CMC . . . N 6 -7.391 64.65 552.979 0 20 ? C4A CMC 301 B 1 
HETATM 5 C C5A CMC . . . N 6 -6.936 65.244 551.818 0 20 ? C5A CMC 301 B 1 
HETATM 6 C C6A CMC . . . N 6 -5.981 66.374 551.94 0 20 ? C6A CMC 301 B 1 
HETATM 7 N N6A CMC . . . N 6 -5.498 66.998 550.839 0 20 ? N6A CMC 301 B 1 
HETATM 8 N N7A CMC . . . N 6 -7.51 64.607 550.779 0 20 ? N7A CMC 301 B 1 
HETATM 9 C C8A CMC . . . N 6 -8.305 63.639 551.289 0 20 ? C8A CMC 301 B 1 
HETATM 10 N N9A CMC . . . N 6 -8.228 63.669 552.627 0 20 ? N9A CMC 301 B 1 
HETATM 11 C C1B CMC . . . N 6 -8.949 62.771 553.564 0 20 ? C1B CMC 301 B 1 
HETATM 12 C C2B CMC . . . N 6 -10.446 62.836 553.322 0 20 ? C2B CMC 301 B 1 
HETATM 13 O O2B CMC . . . N 6 -11.055 63.782 554.206 0 20 ? O2B CMC 301 B 1 
HETATM 14 C C3B CMC . . . N 6 -10.941 61.434 553.61 0 20 ? C3B CMC 301 B 1 
HETATM 15 O O3B CMC . . . N 6 -11.553 61.405 554.896 0 20 ? O3B CMC 301 B 1 
HETATM 16 P P3B CMC . . . N 6 -12.66 60.297 555.27 0 20 ? P3B CMC 301 B 1 
HETATM 17 O O7A CMC . . . N 6 -13.876 60.721 554.482 0 20 ? O7A CMC 301 B 1 
HETATM 18 O O8A CMC . . . N 6 -12.047 58.992 554.82 0 20 ? O8A CMC 301 B 1 
HETATM 19 O O9A CMC . . . N 6 -12.815 60.433 556.766 0 20 ? O9A CMC 301 B 1 
HETATM 20 C C4B CMC . . . N 6 -9.697 60.556 553.603 0 20 ? C4B CMC 301 B 1 
HETATM 21 O O4B CMC . . . N 6 -8.578 61.409 553.343 0 20 ? O4B CMC 301 B 1 
HETATM 22 C C5B CMC . . . N 6 -9.767 59.46 552.546 0 20 ? C5B CMC 301 B 1 
HETATM 23 O O5B CMC . . . N 6 -9.701 60.042 551.245 0 20 ? O5B CMC 301 B 1 
HETATM 24 P P1A CMC . . . N 6 -9.856 59.116 549.935 0 20 ? P1A CMC 301 B 1 
HETATM 25 O O1A CMC . . . N 6 -10.849 59.787 549.016 0 20 ? O1A CMC 301 B 1 
HETATM 26 O O2A CMC . . . N 6 -10.087 57.692 550.386 0 20 ? O2A CMC 301 B 1 
HETATM 27 O O3A CMC . . . N 6 -8.398 59.189 549.25 0 20 ? O3A CMC 301 B 1 
HETATM 28 P P2A CMC . . . N 6 -8.051 60.36 548.2 0 20 ? P2A CMC 301 B 1 
HETATM 29 O O4A CMC . . . N 6 -8.127 61.677 548.932 0 20 ? O4A CMC 301 B 1 
HETATM 30 O O5A CMC . . . N 6 -8.883 60.138 546.959 0 20 ? O5A CMC 301 B 1 
HETATM 31 O O6A CMC . . . N 6 -6.51 60.085 547.818 0 20 ? O6A CMC 301 B 1 
HETATM 32 C CBP CMC . . . N 6 -4.128 60.375 548.035 0 20 ? CBP CMC 301 B 1 
HETATM 33 C CCP CMC . . . N 6 -5.465 60.301 548.765 0 20 ? CCP CMC 301 B 1 
HETATM 34 C CDP CMC . . . N 6 -3.015 60.553 549.058 0 20 ? CDP CMC 301 B 1 
HETATM 35 C CEP CMC . . . N 6 -3.915 59.082 547.259 0 20 ? CEP CMC 301 B 1 
HETATM 36 C CAP CMC . . . N 6 -4.157 61.557 547.074 0 20 ? CAP CMC 301 B 1 
HETATM 37 O OAP CMC . . . N 6 -4.298 62.772 547.821 0 20 ? OAP CMC 301 B 1 
HETATM 38 C C9P CMC . . . N 6 -2.89 61.615 546.269 0 20 ? C9P CMC 301 B 1 
HETATM 39 O O9P CMC . . . N 6 -2.839 61.097 545.167 0 20 ? O9P CMC 301 B 1 
HETATM 40 N N8P CMC . . . N 6 -1.912 62.217 546.791 0 20 ? N8P CMC 301 B 1 
HETATM 41 C C7P CMC . . . N 6 -0.588 62.41 546.217 0 20 ? C7P CMC 301 B 1 
HETATM 42 C C6P CMC . . . N 6 0.007 61.011 546.11 0 20 ? C6P CMC 301 B 1 
HETATM 43 C C5P CMC . . . N 6 0.211 60.445 547.494 0 20 ? C5P CMC 301 B 1 
HETATM 44 O O5P CMC . . . N 6 0.543 61.168 548.419 0 20 ? O5P CMC 301 B 1 
HETATM 45 N N4P CMC . . . N 6 0.02 59.207 547.623 0 20 ? N4P CMC 301 B 1 
HETATM 46 C C3P CMC . . . N 6 0.146 58.41 548.835 0 20 ? C3P CMC 301 B 1 
HETATM 47 C C2P CMC . . . N 6 1.646 58.238 549.046 0 20 ? C2P CMC 301 B 1 
HETATM 48 S S1P CMC . . . N 6 1.919 57.132 550.39 0 20 ? S1P CMC 301 B 1 
HETATM 49 C C1 CMC . . . N 6 1.161 55.579 550.044 0 20 ? C1 CMC 301 B 1 
HETATM 50 C C2 CMC . . . N 6 1.878 54.903 548.899 0 20 ? C2 CMC 301 B 1 
HETATM 51 O O21 CMC . . . N 6 1.936 55.432 547.801 0 20 ? O21 CMC 301 B 1 
#
_model_server_stats.io_time_ms              76 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           490 
_model_server_stats.encode_time_ms          18 
_model_server_stats.element_count           51 
#