data_4Y4M # _model_server_result.job_id S9yQ0BXNXD8SQNf7MIjRiA _model_server_result.datetime_utc '2024-11-16 19:41:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4y4m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":302}' # _entry.id 4Y4M # _exptl.entry_id 4Y4M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.29 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4Y4M _cell.length_a 180.76 _cell.length_b 180.76 _cell.length_c 73.328 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Y4M _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 M N N ? 3 Q N N ? 3 S N N ? 3 U N N # _chem_comp.formula 'C8 H17 N O3 S' _chem_comp.formula_weight 207.29 _chem_comp.id NHE _chem_comp.mon_nstd_flag . _chem_comp.name '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-CYCLOHEXYLTAURINE;CHES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3' C2' NHE sing 298 n n C3' C4' NHE sing 299 n n C3' "H3'1" NHE sing 300 n n C3' "H3'2" NHE sing 301 n n C2' C1' NHE sing 302 n n C2' "H2'1" NHE sing 303 n n C2' "H2'2" NHE sing 304 n n C1' C6' NHE sing 305 n n C1' N NHE sing 306 n n C1' "HC'1" NHE sing 307 n n C6' C5' NHE sing 308 n n C6' "H6'1" NHE sing 309 n n C6' "H6'2" NHE sing 310 n n N C1 NHE sing 311 n n N HN NHE sing 312 n n C1 C2 NHE sing 313 n n C1 HC11 NHE sing 314 n n C1 HC12 NHE sing 315 n n C2 S NHE sing 316 n n C2 HC21 NHE sing 317 n n C2 HC22 NHE sing 318 n n S O1 NHE doub 319 n n S O2 NHE doub 320 n n S O3 NHE sing 321 n n O3 HO3 NHE sing 322 n n C5' C4' NHE sing 323 n n C5' "H5'1" NHE sing 324 n n C5' "H5'2" NHE sing 325 n n C4' "H4'1" NHE sing 326 n n C4' "H4'2" NHE sing 327 n n # _atom_sites.entry_id 4Y4M _atom_sites.fract_transf_matrix[1][1] 0.005532 _atom_sites.fract_transf_matrix[1][2] 0.003194 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006388 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013637 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 48F A 1 301 1 48F Apl . J 3 NHE A 1 302 2 NHE NHE . K 2 48F B 1 301 1 48F Apl . L 2 48F C 1 301 1 48F Apl . M 3 NHE C 1 302 2 NHE NHE . N 2 48F D 1 301 1 48F Apl . O 2 48F E 1 301 1 48F Apl . P 2 48F F 1 301 1 48F Apl . Q 3 NHE F 1 302 2 NHE NHE . R 2 48F G 1 301 1 48F Apl . S 3 NHE G 1 302 2 NHE NHE . T 2 48F H 1 301 1 48F Apl . U 3 NHE H 1 302 2 NHE NHE . V 4 HOH B 1 401 5 HOH HOH . V 4 HOH B 2 402 6 HOH HOH . V 4 HOH B 3 403 16 HOH HOH . W 4 HOH C 1 401 10 HOH HOH . W 4 HOH C 2 402 21 HOH HOH . X 4 HOH D 1 401 9 HOH HOH . X 4 HOH D 2 402 17 HOH HOH . Y 4 HOH E 1 401 18 HOH HOH . Z 4 HOH F 1 401 2 HOH HOH . Z 4 HOH F 2 402 3 HOH HOH . Z 4 HOH F 3 403 12 HOH HOH . Z 4 HOH F 4 404 19 HOH HOH . Z 4 HOH F 5 405 20 HOH HOH . AA 4 HOH G 1 401 1 HOH HOH . AA 4 HOH G 2 402 4 HOH HOH . AA 4 HOH G 3 403 7 HOH HOH . AA 4 HOH G 4 404 8 HOH HOH . AA 4 HOH G 5 405 11 HOH HOH . AA 4 HOH G 6 406 13 HOH HOH . AA 4 HOH G 7 407 14 HOH HOH . AA 4 HOH G 8 408 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3' NHE . . . Q 3 32.357 -33.271 -42.837 1 73.05 ? C3' NHE 302 F 1 HETATM 2 C C2' NHE . . . Q 3 32.594 -32.422 -44.078 1 69.98 ? C2' NHE 302 F 1 HETATM 3 C C1' NHE . . . Q 3 34.003 -31.872 -44.072 1 69.95 ? C1' NHE 302 F 1 HETATM 4 C C6' NHE . . . Q 3 35.021 -33.003 -43.928 1 72.67 ? C6' NHE 302 F 1 HETATM 5 N N NHE . . . Q 3 34.195 -31.164 -45.319 1 71.76 ? N NHE 302 F 1 HETATM 6 C C1 NHE . . . Q 3 34.612 -29.78 -45.369 1 73.4 ? C1 NHE 302 F 1 HETATM 7 C C2 NHE . . . Q 3 33.4 -28.864 -45.253 1 78.51 ? C2 NHE 302 F 1 HETATM 8 S S NHE . . . Q 3 33.174 -27.893 -46.582 1 81.11 ? S NHE 302 F 1 HETATM 9 O O1 NHE . . . Q 3 34.181 -28.254 -47.819 1 83.83 ? O1 NHE 302 F 1 HETATM 10 O O2 NHE . . . Q 3 31.803 -28.067 -46.991 1 69.2 ? O2 NHE 302 F 1 HETATM 11 O O3 NHE . . . Q 3 33.478 -26.545 -46.19 1 81.97 ? O3 NHE 302 F 1 HETATM 12 C C5' NHE . . . Q 3 34.715 -34.036 -42.84 1 72.3 ? C5' NHE 302 F 1 HETATM 13 C C4' NHE . . . Q 3 33.267 -34.492 -42.868 1 73.52 ? C4' NHE 302 F 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 13 #