data_4Y94
#
_model_server_result.job_id            VYPBaL4RJtv09XyJH36O2w 
_model_server_result.datetime_utc      '2024-11-18 20:32:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4y94 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":201}' 
#
_entry.id    4Y94 
#
_exptl.entry_id    4Y94 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              660.035 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'INOSITOL HEXAKISPHOSPHATE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         82.08 
_cell.angle_beta          88.79 
_cell.angle_gamma         89.89 
_cell.entry_id            4Y94 
_cell.length_a            37.203 
_cell.length_b            64.012 
_cell.length_c            80.029 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4Y94 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
C,I,J,K,Q 1 1 
A,E,F,O 2 1 
B,G,H,P 3 1 
D,L,M,N,R 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 J N N 
? 2 L N N 
? 2 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 144 B HIS 143 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc2 A SG CYS 155 B CYS 154 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? 
metalc ? metalc3 A SG CYS 156 B CYS 155 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc4 A SG CYS 166 B CYS 165 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc5 B ND1 HIS 144 C HIS 143 1_555 H ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc6 B SG CYS 155 C CYS 154 1_555 H ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc7 B SG CYS 156 C CYS 155 1_555 H ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc8 B SG CYS 166 C CYS 165 1_555 H ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc9 C ND1 HIS 144 A HIS 143 1_555 K ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc10 C SG CYS 155 A CYS 154 1_555 K ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? 
metalc ? metalc11 C SG CYS 156 A CYS 155 1_555 K ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc12 C SG CYS 166 A CYS 165 1_555 K ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc13 D ND1 HIS 144 D HIS 143 1_555 N ZN ZN . D ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc14 D SG CYS 155 D CYS 154 1_555 N ZN ZN . D ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? 
metalc ? metalc15 D SG CYS 156 D CYS 155 1_555 N ZN ZN . D ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? 
metalc ? metalc16 D SG CYS 166 D CYS 165 1_555 N ZN ZN . D ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? 
#
_chem_comp.formula           'C6 H18 O24 P6' 
_chem_comp.formula_weight    660.035 
_chem_comp.id                IHP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'INOSITOL HEXAKISPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 IHP sing 152 n n 
C1 C6 IHP sing 153 n n 
C1 O11 IHP sing 154 n n 
C1 H1 IHP sing 155 n n 
C2 C3 IHP sing 156 n n 
C2 O12 IHP sing 157 n n 
C2 H2 IHP sing 158 n n 
C3 C4 IHP sing 159 n n 
C3 O13 IHP sing 160 n n 
C3 H3 IHP sing 161 n n 
C4 C5 IHP sing 162 n n 
C4 O14 IHP sing 163 n n 
C4 H4 IHP sing 164 n n 
C5 C6 IHP sing 165 n n 
C5 O15 IHP sing 166 n n 
C5 H5 IHP sing 167 n n 
C6 O16 IHP sing 168 n n 
C6 H6 IHP sing 169 n n 
O11 P1 IHP sing 170 n n 
P1 O21 IHP doub 171 n n 
P1 O31 IHP sing 172 n n 
P1 O41 IHP sing 173 n n 
O31 H31 IHP sing 174 n n 
O41 H41 IHP sing 175 n n 
O12 P2 IHP sing 176 n n 
P2 O22 IHP doub 177 n n 
P2 O32 IHP sing 178 n n 
P2 O42 IHP sing 179 n n 
O32 H32 IHP sing 180 n n 
O42 H42 IHP sing 181 n n 
O13 P3 IHP sing 182 n n 
P3 O23 IHP doub 183 n n 
P3 O33 IHP sing 184 n n 
P3 O43 IHP sing 185 n n 
O33 H33 IHP sing 186 n n 
O43 H43 IHP sing 187 n n 
O14 P4 IHP sing 188 n n 
P4 O24 IHP doub 189 n n 
P4 O34 IHP sing 190 n n 
P4 O44 IHP sing 191 n n 
O34 H34 IHP sing 192 n n 
O44 H44 IHP sing 193 n n 
O15 P5 IHP sing 194 n n 
P5 O25 IHP doub 195 n n 
P5 O35 IHP sing 196 n n 
P5 O45 IHP sing 197 n n 
O35 H35 IHP sing 198 n n 
O45 H45 IHP sing 199 n n 
O16 P6 IHP sing 200 n n 
P6 O26 IHP doub 201 n n 
P6 O36 IHP sing 202 n n 
P6 O46 IHP sing 203 n n 
O36 H36 IHP sing 204 n n 
O46 H46 IHP sing 205 n n 
#
_atom_sites.entry_id                     4Y94 
_atom_sites.fract_transf_matrix[1][1]    0.02688 
_atom_sites.fract_transf_matrix[1][2]    -0.000051 
_atom_sites.fract_transf_matrix[1][3]    -0.000566 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015622 
_atom_sites.fract_transf_matrix[2][3]    -0.002172 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012618 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 IHP B 1 201 500 IHP IHP . 
F 3 ZN B 1 202 999 ZN ZN . 
G 2 IHP C 1 201 500 IHP IHP . 
H 3 ZN C 1 202 999 ZN ZN . 
I 2 IHP A 1 501 501 IHP IHP . 
J 2 IHP A 1 502 500 IHP IHP . 
K 3 ZN A 1 503 999 ZN ZN . 
L 2 IHP D 1 201 500 IHP IHP . 
M 2 IHP D 1 202 501 IHP IHP . 
N 3 ZN D 1 203 999 ZN ZN . 
O 4 HOH B 1 301 34 HOH HOH . 
O 4 HOH B 2 302 5 HOH HOH . 
O 4 HOH B 3 303 6 HOH HOH . 
O 4 HOH B 4 304 11 HOH HOH . 
O 4 HOH B 5 305 14 HOH HOH . 
O 4 HOH B 6 306 18 HOH HOH . 
O 4 HOH B 7 307 26 HOH HOH . 
O 4 HOH B 8 308 36 HOH HOH . 
P 4 HOH C 1 301 21 HOH HOH . 
P 4 HOH C 2 302 4 HOH HOH . 
P 4 HOH C 3 303 25 HOH HOH . 
P 4 HOH C 4 304 16 HOH HOH . 
P 4 HOH C 5 305 13 HOH HOH . 
P 4 HOH C 6 306 33 HOH HOH . 
P 4 HOH C 7 307 3 HOH HOH . 
P 4 HOH C 8 308 7 HOH HOH . 
P 4 HOH C 9 309 9 HOH HOH . 
P 4 HOH C 10 310 24 HOH HOH . 
P 4 HOH C 11 311 27 HOH HOH . 
P 4 HOH C 12 312 28 HOH HOH . 
P 4 HOH C 13 313 29 HOH HOH . 
P 4 HOH C 14 314 31 HOH HOH . 
P 4 HOH C 15 315 37 HOH HOH . 
Q 4 HOH A 1 601 48 HOH HOH . 
Q 4 HOH A 2 602 39 HOH HOH . 
Q 4 HOH A 3 603 10 HOH HOH . 
Q 4 HOH A 4 604 35 HOH HOH . 
Q 4 HOH A 5 605 8 HOH HOH . 
Q 4 HOH A 6 606 12 HOH HOH . 
Q 4 HOH A 7 607 32 HOH HOH . 
Q 4 HOH A 8 608 43 HOH HOH . 
Q 4 HOH A 9 609 44 HOH HOH . 
Q 4 HOH A 10 610 45 HOH HOH . 
Q 4 HOH A 11 611 46 HOH HOH . 
R 4 HOH D 1 301 22 HOH HOH . 
R 4 HOH D 2 302 1 HOH HOH . 
R 4 HOH D 3 303 15 HOH HOH . 
R 4 HOH D 4 304 17 HOH HOH . 
R 4 HOH D 5 305 19 HOH HOH . 
R 4 HOH D 6 306 23 HOH HOH . 
R 4 HOH D 7 307 30 HOH HOH . 
R 4 HOH D 8 308 40 HOH HOH . 
R 4 HOH D 9 309 47 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 IHP . . . G 2 2.169 31.322 -68.664 1 84.6 ? C1 IHP 201 C 1 
HETATM 2 C C2 IHP . . . G 2 3.564 30.935 -68.231 1 81.52 ? C2 IHP 201 C 1 
HETATM 3 C C3 IHP . . . G 2 3.763 31.342 -66.81 1 79.48 ? C3 IHP 201 C 1 
HETATM 4 C C4 IHP . . . G 2 2.772 30.617 -65.905 1 82.88 ? C4 IHP 201 C 1 
HETATM 5 C C5 IHP . . . G 2 1.366 31.016 -66.258 1 80.71 ? C5 IHP 201 C 1 
HETATM 6 C C6 IHP . . . G 2 1.088 30.787 -67.733 1 76.35 ? C6 IHP 201 C 1 
HETATM 7 O O11 IHP . . . G 2 1.907 30.705 -69.889 1 82.49 ? O11 IHP 201 C 1 
HETATM 8 P P1 IHP . . . G 2 1.816 31.494 -71.265 1 84.95 ? P1 IHP 201 C 1 
HETATM 9 O O21 IHP . . . G 2 0.692 30.853 -72.028 1 94.12 ? O21 IHP 201 C 1 
HETATM 10 O O31 IHP . . . G 2 1.766 33.089 -70.926 1 77.21 ? O31 IHP 201 C 1 
HETATM 11 O O41 IHP . . . G 2 3.298 31.353 -71.909 1 96.12 ? O41 IHP 201 C 1 
HETATM 12 O O12 IHP . . . G 2 3.616 29.531 -68.231 1 77.35 ? O12 IHP 201 C 1 
HETATM 13 P P2 IHP . . . G 2 4.747 28.64 -69.011 1 103.41 ? P2 IHP 201 C 1 
HETATM 14 O O22 IHP . . . G 2 6.115 28.961 -68.439 1 94.23 ? O22 IHP 201 C 1 
HETATM 15 O O32 IHP . . . G 2 4.235 27.055 -68.942 1 88.45 ? O32 IHP 201 C 1 
HETATM 16 O O42 IHP . . . G 2 4.556 29.062 -70.568 1 82.28 ? O42 IHP 201 C 1 
HETATM 17 O O13 IHP . . . G 2 5.02 30.81 -66.527 1 88.58 ? O13 IHP 201 C 1 
HETATM 18 P P3 IHP . . . G 2 6.267 31.635 -65.903 1 90.43 ? P3 IHP 201 C 1 
HETATM 19 O O23 IHP . . . G 2 6.737 31.036 -64.591 1 100.38 ? O23 IHP 201 C 1 
HETATM 20 O O33 IHP . . . G 2 5.692 33.204 -65.68 1 67.12 ? O33 IHP 201 C 1 
HETATM 21 O O43 IHP . . . G 2 7.319 31.743 -67.247 1 81.15 ? O43 IHP 201 C 1 
HETATM 22 O O14 IHP . . . G 2 2.969 31.067 -64.581 1 88.26 ? O14 IHP 201 C 1 
HETATM 23 P P4 IHP . . . G 2 3.581 30.165 -63.348 1 90.43 ? P4 IHP 201 C 1 
HETATM 24 O O24 IHP . . . G 2 2.525 29.895 -62.327 1 88.16 ? O24 IHP 201 C 1 
HETATM 25 O O34 IHP . . . G 2 4.367 28.893 -63.968 1 75.41 ? O34 IHP 201 C 1 
HETATM 26 O O44 IHP . . . G 2 4.713 31.16 -62.809 1 91.37 ? O44 IHP 201 C 1 
HETATM 27 O O15 IHP . . . G 2 0.417 30.291 -65.455 1 65.54 ? O15 IHP 201 C 1 
HETATM 28 P P5 IHP . . . G 2 -0.541 31.141 -64.435 1 65.22 ? P5 IHP 201 C 1 
HETATM 29 O O25 IHP . . . G 2 -1.139 32.34 -65.099 1 62.14 ? O25 IHP 201 C 1 
HETATM 30 O O35 IHP . . . G 2 0.324 31.432 -63.177 1 55.53 ? O35 IHP 201 C 1 
HETATM 31 O O45 IHP . . . G 2 -1.606 30.061 -64.013 1 69.6 ? O45 IHP 201 C 1 
HETATM 32 O O16 IHP . . . G 2 -0.1 31.438 -68.088 1 77.31 ? O16 IHP 201 C 1 
HETATM 33 P P6 IHP . . . G 2 -1.294 30.548 -68.641 1 84.34 ? P6 IHP 201 C 1 
HETATM 34 O O26 IHP . . . G 2 -1.104 29.086 -68.578 1 83.14 ? O26 IHP 201 C 1 
HETATM 35 O O36 IHP . . . G 2 -1.474 31.055 -70.101 1 82.35 ? O36 IHP 201 C 1 
HETATM 36 O O46 IHP . . . G 2 -2.478 31.165 -67.788 1 79.09 ? O46 IHP 201 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           36 
#