data_4Y9H # _model_server_result.job_id d-M7CMoCqd8ncUyymWXEog _model_server_result.datetime_utc '2024-10-18 20:21:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4y9h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":309}' # _entry.id 4Y9H # _exptl.entry_id 4Y9H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.441 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXADECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Y9H _cell.length_a 45.215 _cell.length_b 102.794 _cell.length_c 128.337 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Y9H _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H34' _chem_comp.formula_weight 226.441 _chem_comp.id R16 _chem_comp.mon_nstd_flag . _chem_comp.name HEXADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C28 R16 sing 365 n n C27 H271 R16 sing 366 n n C27 H272 R16 sing 367 n n C27 H273 R16 sing 368 n n C28 C29 R16 sing 369 n n C28 H281 R16 sing 370 n n C28 H282 R16 sing 371 n n C29 C30 R16 sing 372 n n C29 H291 R16 sing 373 n n C29 H292 R16 sing 374 n n C30 C31 R16 sing 375 n n C30 H301 R16 sing 376 n n C30 H302 R16 sing 377 n n C31 C32 R16 sing 378 n n C31 H311 R16 sing 379 n n C31 H312 R16 sing 380 n n C32 C33 R16 sing 381 n n C32 H321 R16 sing 382 n n C32 H322 R16 sing 383 n n C33 C34 R16 sing 384 n n C33 H331 R16 sing 385 n n C33 H332 R16 sing 386 n n C34 C35 R16 sing 387 n n C34 H341 R16 sing 388 n n C34 H342 R16 sing 389 n n C35 C36 R16 sing 390 n n C35 H351 R16 sing 391 n n C35 H352 R16 sing 392 n n C36 C37 R16 sing 393 n n C36 H361 R16 sing 394 n n C36 H362 R16 sing 395 n n C37 C38 R16 sing 396 n n C37 H371 R16 sing 397 n n C37 H372 R16 sing 398 n n C38 C39 R16 sing 399 n n C38 H381 R16 sing 400 n n C38 H382 R16 sing 401 n n C39 C40 R16 sing 402 n n C39 H391 R16 sing 403 n n C39 H392 R16 sing 404 n n C40 C41 R16 sing 405 n n C40 H401 R16 sing 406 n n C40 H402 R16 sing 407 n n C41 C42 R16 sing 408 n n C41 H411 R16 sing 409 n n C41 H412 R16 sing 410 n n C42 H421 R16 sing 411 n n C42 H422 R16 sing 412 n n C42 H423 R16 sing 413 n n # _atom_sites.entry_id 4Y9H _atom_sites.fract_transf_matrix[1][1] 0.022117 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009728 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007792 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 301 301 RET RET . C 3 PO4 A 1 302 310 PO4 PO4 . D 4 HP6 A 1 303 401 HP6 HP6 . E 5 D12 A 1 304 402 D12 D12 . F 5 D12 A 1 305 403 D12 D12 . G 5 D12 A 1 306 405 D12 D12 . H 6 D10 A 1 307 406 D10 D10 . I 6 D10 A 1 308 409 D10 D10 . J 7 R16 A 1 309 411 R16 R16 . K 6 D10 A 1 310 450 D10 D10 . L 5 D12 A 1 311 451 D12 D12 . M 5 D12 A 1 312 452 D12 D12 . N 8 DD9 A 1 313 453 DD9 DD9 . O 5 D12 A 1 314 454 D12 D12 . P 5 D12 A 1 315 455 D12 D12 . Q 5 D12 A 1 316 456 D12 D12 . R 6 D10 A 1 317 457 D10 D10 . S 9 HOH A 1 401 1425 HOH HOH . S 9 HOH A 2 402 1394 HOH HOH . S 9 HOH A 3 403 1280 HOH HOH . S 9 HOH A 4 404 1260 HOH HOH . S 9 HOH A 5 405 1323 HOH HOH . S 9 HOH A 6 406 1435 HOH HOH . S 9 HOH A 7 407 1286 HOH HOH . S 9 HOH A 8 408 1265 HOH HOH . S 9 HOH A 9 409 1263 HOH HOH . S 9 HOH A 10 410 1266 HOH HOH . S 9 HOH A 11 411 1292 HOH HOH . S 9 HOH A 12 412 1287 HOH HOH . S 9 HOH A 13 413 1262 HOH HOH . S 9 HOH A 14 414 1264 HOH HOH . S 9 HOH A 15 415 1309 HOH HOH . S 9 HOH A 16 416 1270 HOH HOH . S 9 HOH A 17 417 1290 HOH HOH . S 9 HOH A 18 418 1293 HOH HOH . S 9 HOH A 19 419 1299 HOH HOH . S 9 HOH A 20 420 1258 HOH HOH . S 9 HOH A 21 421 1272 HOH HOH . S 9 HOH A 22 422 1307 HOH HOH . S 9 HOH A 23 423 1414 HOH HOH . S 9 HOH A 24 424 1304 HOH HOH . S 9 HOH A 25 425 1418 HOH HOH . S 9 HOH A 26 426 1333 HOH HOH . S 9 HOH A 27 427 1289 HOH HOH . S 9 HOH A 28 428 1303 HOH HOH . S 9 HOH A 29 429 1273 HOH HOH . S 9 HOH A 30 430 1276 HOH HOH . S 9 HOH A 31 431 1321 HOH HOH . S 9 HOH A 32 432 1361 HOH HOH . S 9 HOH A 33 433 1440 HOH HOH . S 9 HOH A 34 434 1296 HOH HOH . S 9 HOH A 35 435 1277 HOH HOH . S 9 HOH A 36 436 1261 HOH HOH . S 9 HOH A 37 437 1426 HOH HOH . S 9 HOH A 38 438 1297 HOH HOH . S 9 HOH A 39 439 1338 HOH HOH . S 9 HOH A 40 440 1268 HOH HOH . S 9 HOH A 41 441 1283 HOH HOH . S 9 HOH A 42 442 1291 HOH HOH . S 9 HOH A 43 443 1349 HOH HOH . S 9 HOH A 44 444 1271 HOH HOH . S 9 HOH A 45 445 1430 HOH HOH . S 9 HOH A 46 446 1324 HOH HOH . S 9 HOH A 47 447 1441 HOH HOH . S 9 HOH A 48 448 1314 HOH HOH . S 9 HOH A 49 449 1381 HOH HOH . S 9 HOH A 50 450 1279 HOH HOH . S 9 HOH A 51 451 1285 HOH HOH . S 9 HOH A 52 452 1306 HOH HOH . S 9 HOH A 53 453 1313 HOH HOH . S 9 HOH A 54 454 1288 HOH HOH . S 9 HOH A 55 455 1259 HOH HOH . S 9 HOH A 56 456 1416 HOH HOH . S 9 HOH A 57 457 1346 HOH HOH . S 9 HOH A 58 458 1284 HOH HOH . S 9 HOH A 59 459 1274 HOH HOH . S 9 HOH A 60 460 1424 HOH HOH . S 9 HOH A 61 461 1344 HOH HOH . S 9 HOH A 62 462 1275 HOH HOH . S 9 HOH A 63 463 1325 HOH HOH . S 9 HOH A 64 464 1320 HOH HOH . S 9 HOH A 65 465 1331 HOH HOH . S 9 HOH A 66 466 1362 HOH HOH . S 9 HOH A 67 467 1308 HOH HOH . S 9 HOH A 68 468 1352 HOH HOH . S 9 HOH A 69 469 1300 HOH HOH . S 9 HOH A 70 470 1322 HOH HOH . S 9 HOH A 71 471 1373 HOH HOH . S 9 HOH A 72 472 1334 HOH HOH . S 9 HOH A 73 473 1433 HOH HOH . S 9 HOH A 74 474 1421 HOH HOH . S 9 HOH A 75 475 1438 HOH HOH . S 9 HOH A 76 476 1360 HOH HOH . S 9 HOH A 77 477 1311 HOH HOH . S 9 HOH A 78 478 1342 HOH HOH . S 9 HOH A 79 479 1327 HOH HOH . S 9 HOH A 80 480 1332 HOH HOH . S 9 HOH A 81 481 1413 HOH HOH . S 9 HOH A 82 482 1431 HOH HOH . S 9 HOH A 83 483 1427 HOH HOH . S 9 HOH A 84 484 1336 HOH HOH . S 9 HOH A 85 485 1407 HOH HOH . S 9 HOH A 86 486 1429 HOH HOH . S 9 HOH A 87 487 1422 HOH HOH . S 9 HOH A 88 488 1335 HOH HOH . S 9 HOH A 89 489 1388 HOH HOH . S 9 HOH A 90 490 1432 HOH HOH . S 9 HOH A 91 491 1423 HOH HOH . S 9 HOH A 92 492 1404 HOH HOH . S 9 HOH A 93 493 1439 HOH HOH . S 9 HOH A 94 494 1399 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 R16 . . . J 7 40.22 -0.094 15.273 1 63.88 ? C27 R16 309 A 1 HETATM 2 C C28 R16 . . . J 7 38.893 -0.442 14.632 1 54.47 ? C28 R16 309 A 1 HETATM 3 C C29 R16 . . . J 7 38.784 0.14 13.234 1 50.24 ? C29 R16 309 A 1 HETATM 4 C C30 R16 . . . J 7 37.443 -0.317 12.63 1 46.66 ? C30 R16 309 A 1 HETATM 5 C C31 R16 . . . J 7 37.489 -0.427 11.136 1 39.54 ? C31 R16 309 A 1 HETATM 6 C C32 R16 . . . J 7 36.118 -0.45 10.477 1 36.71 ? C32 R16 309 A 1 HETATM 7 C C33 R16 . . . J 7 36.295 -0.435 8.958 1 35.47 ? C33 R16 309 A 1 HETATM 8 C C34 R16 . . . J 7 35.068 -0.654 8.09 1 29.94 ? C34 R16 309 A 1 HETATM 9 C C35 R16 . . . J 7 33.975 0.273 8.512 1 28.06 ? C35 R16 309 A 1 HETATM 10 C C36 R16 . . . J 7 32.76 0.219 7.664 1 25.42 ? C36 R16 309 A 1 HETATM 11 C C37 R16 . . . J 7 31.747 1.159 8.25 1 24.21 ? C37 R16 309 A 1 HETATM 12 C C38 R16 . . . J 7 30.713 0.654 9.11 1 26.33 ? C38 R16 309 A 1 HETATM 13 C C39 R16 . . . J 7 29.756 1.661 9.582 1 24.62 ? C39 R16 309 A 1 HETATM 14 C C40 R16 . . . J 7 29.063 1.313 10.825 1 27.32 ? C40 R16 309 A 1 HETATM 15 C C41 R16 . . . J 7 27.795 2.126 10.941 1 29.38 ? C41 R16 309 A 1 HETATM 16 C C42 R16 . . . J 7 26.597 1.533 11.492 1 30.97 ? C42 R16 309 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #