data_4Y9I # _model_server_result.job_id 6vG-t5TIwvgXBj80UjMmpA _model_server_result.datetime_utc '2024-11-24 15:10:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4y9i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4Y9I # _exptl.entry_id 4Y9I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.59 _cell.angle_gamma 90 _cell.entry_id 4Y9I _cell.length_a 37.49 _cell.length_b 36.85 _cell.length_c 77.591 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Y9I _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 247 n n P O2 PO4 sing 248 n n P O3 PO4 sing 249 n n P O4 PO4 sing 250 n n # _atom_sites.entry_id 4Y9I _atom_sites.fract_transf_matrix[1][1] 0.026674 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00308 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027137 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012974 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 201 1 PO4 PO4 . C 3 HOH A 1 301 142 HOH HOH . C 3 HOH A 2 302 185 HOH HOH . C 3 HOH A 3 303 210 HOH HOH . C 3 HOH A 4 304 138 HOH HOH . C 3 HOH A 5 305 155 HOH HOH . C 3 HOH A 6 306 101 HOH HOH . C 3 HOH A 7 307 106 HOH HOH . C 3 HOH A 8 308 107 HOH HOH . C 3 HOH A 9 309 179 HOH HOH . C 3 HOH A 10 310 25 HOH HOH . C 3 HOH A 11 311 64 HOH HOH . C 3 HOH A 12 312 71 HOH HOH . C 3 HOH A 13 313 112 HOH HOH . C 3 HOH A 14 314 127 HOH HOH . C 3 HOH A 15 315 89 HOH HOH . C 3 HOH A 16 316 135 HOH HOH . C 3 HOH A 17 317 57 HOH HOH . C 3 HOH A 18 318 59 HOH HOH . C 3 HOH A 19 319 108 HOH HOH . C 3 HOH A 20 320 48 HOH HOH . C 3 HOH A 21 321 105 HOH HOH . C 3 HOH A 22 322 17 HOH HOH . C 3 HOH A 23 323 34 HOH HOH . C 3 HOH A 24 324 16 HOH HOH . C 3 HOH A 25 325 53 HOH HOH . C 3 HOH A 26 326 134 HOH HOH . C 3 HOH A 27 327 62 HOH HOH . C 3 HOH A 28 328 22 HOH HOH . C 3 HOH A 29 329 9 HOH HOH . C 3 HOH A 30 330 7 HOH HOH . C 3 HOH A 31 331 88 HOH HOH . C 3 HOH A 32 332 153 HOH HOH . C 3 HOH A 33 333 149 HOH HOH . C 3 HOH A 34 334 85 HOH HOH . C 3 HOH A 35 335 146 HOH HOH . C 3 HOH A 36 336 72 HOH HOH . C 3 HOH A 37 337 47 HOH HOH . C 3 HOH A 38 338 115 HOH HOH . C 3 HOH A 39 339 100 HOH HOH . C 3 HOH A 40 340 12 HOH HOH . C 3 HOH A 41 341 26 HOH HOH . C 3 HOH A 42 342 84 HOH HOH . C 3 HOH A 43 343 150 HOH HOH . C 3 HOH A 44 344 136 HOH HOH . C 3 HOH A 45 345 152 HOH HOH . C 3 HOH A 46 346 21 HOH HOH . C 3 HOH A 47 347 14 HOH HOH . C 3 HOH A 48 348 15 HOH HOH . C 3 HOH A 49 349 39 HOH HOH . C 3 HOH A 50 350 35 HOH HOH . C 3 HOH A 51 351 61 HOH HOH . C 3 HOH A 52 352 177 HOH HOH . C 3 HOH A 53 353 28 HOH HOH . C 3 HOH A 54 354 123 HOH HOH . C 3 HOH A 55 355 54 HOH HOH . C 3 HOH A 56 356 6 HOH HOH . C 3 HOH A 57 357 167 HOH HOH . C 3 HOH A 58 358 31 HOH HOH . C 3 HOH A 59 359 43 HOH HOH . C 3 HOH A 60 360 186 HOH HOH . C 3 HOH A 61 361 143 HOH HOH . C 3 HOH A 62 362 33 HOH HOH . C 3 HOH A 63 363 125 HOH HOH . C 3 HOH A 64 364 63 HOH HOH . C 3 HOH A 65 365 2 HOH HOH . C 3 HOH A 66 366 74 HOH HOH . C 3 HOH A 67 367 126 HOH HOH . C 3 HOH A 68 368 46 HOH HOH . C 3 HOH A 69 369 73 HOH HOH . C 3 HOH A 70 370 27 HOH HOH . C 3 HOH A 71 371 114 HOH HOH . C 3 HOH A 72 372 78 HOH HOH . C 3 HOH A 73 373 79 HOH HOH . C 3 HOH A 74 374 49 HOH HOH . C 3 HOH A 75 375 44 HOH HOH . C 3 HOH A 76 376 151 HOH HOH . C 3 HOH A 77 377 32 HOH HOH . C 3 HOH A 78 378 206 HOH HOH . C 3 HOH A 79 379 13 HOH HOH . C 3 HOH A 80 380 199 HOH HOH . C 3 HOH A 81 381 168 HOH HOH . C 3 HOH A 82 382 130 HOH HOH . C 3 HOH A 83 383 81 HOH HOH . C 3 HOH A 84 384 96 HOH HOH . C 3 HOH A 85 385 110 HOH HOH . C 3 HOH A 86 386 56 HOH HOH . C 3 HOH A 87 387 133 HOH HOH . C 3 HOH A 88 388 192 HOH HOH . C 3 HOH A 89 389 103 HOH HOH . C 3 HOH A 90 390 169 HOH HOH . C 3 HOH A 91 391 36 HOH HOH . C 3 HOH A 92 392 37 HOH HOH . C 3 HOH A 93 393 191 HOH HOH . C 3 HOH A 94 394 82 HOH HOH . C 3 HOH A 95 395 140 HOH HOH . C 3 HOH A 96 396 173 HOH HOH . C 3 HOH A 97 397 178 HOH HOH . C 3 HOH A 98 398 190 HOH HOH . C 3 HOH A 99 399 19 HOH HOH . C 3 HOH A 100 400 188 HOH HOH . C 3 HOH A 101 401 194 HOH HOH . C 3 HOH A 102 402 176 HOH HOH . C 3 HOH A 103 403 137 HOH HOH . C 3 HOH A 104 404 121 HOH HOH . C 3 HOH A 105 405 58 HOH HOH . C 3 HOH A 106 406 65 HOH HOH . C 3 HOH A 107 407 211 HOH HOH . C 3 HOH A 108 408 91 HOH HOH . C 3 HOH A 109 409 86 HOH HOH . C 3 HOH A 110 410 93 HOH HOH . C 3 HOH A 111 411 180 HOH HOH . C 3 HOH A 112 412 102 HOH HOH . C 3 HOH A 113 413 124 HOH HOH . C 3 HOH A 114 414 80 HOH HOH . C 3 HOH A 115 415 118 HOH HOH . C 3 HOH A 116 416 76 HOH HOH . C 3 HOH A 117 417 77 HOH HOH . C 3 HOH A 118 418 41 HOH HOH . C 3 HOH A 119 419 90 HOH HOH . C 3 HOH A 120 420 119 HOH HOH . C 3 HOH A 121 421 92 HOH HOH . C 3 HOH A 122 422 99 HOH HOH . C 3 HOH A 123 423 87 HOH HOH . C 3 HOH A 124 424 95 HOH HOH . C 3 HOH A 125 425 98 HOH HOH . C 3 HOH A 126 426 1 HOH HOH . C 3 HOH A 127 427 3 HOH HOH . C 3 HOH A 128 428 4 HOH HOH . C 3 HOH A 129 429 5 HOH HOH . C 3 HOH A 130 430 8 HOH HOH . C 3 HOH A 131 431 10 HOH HOH . C 3 HOH A 132 432 11 HOH HOH . C 3 HOH A 133 433 18 HOH HOH . C 3 HOH A 134 434 23 HOH HOH . C 3 HOH A 135 435 24 HOH HOH . C 3 HOH A 136 436 29 HOH HOH . C 3 HOH A 137 437 30 HOH HOH . C 3 HOH A 138 438 38 HOH HOH . C 3 HOH A 139 439 40 HOH HOH . C 3 HOH A 140 440 42 HOH HOH . C 3 HOH A 141 441 45 HOH HOH . C 3 HOH A 142 442 50 HOH HOH . C 3 HOH A 143 443 51 HOH HOH . C 3 HOH A 144 444 52 HOH HOH . C 3 HOH A 145 445 55 HOH HOH . C 3 HOH A 146 446 60 HOH HOH . C 3 HOH A 147 447 66 HOH HOH . C 3 HOH A 148 448 67 HOH HOH . C 3 HOH A 149 449 68 HOH HOH . C 3 HOH A 150 450 69 HOH HOH . C 3 HOH A 151 451 75 HOH HOH . C 3 HOH A 152 452 83 HOH HOH . C 3 HOH A 153 453 94 HOH HOH . C 3 HOH A 154 454 104 HOH HOH . C 3 HOH A 155 455 111 HOH HOH . C 3 HOH A 156 456 113 HOH HOH . C 3 HOH A 157 457 120 HOH HOH . C 3 HOH A 158 458 122 HOH HOH . C 3 HOH A 159 459 128 HOH HOH . C 3 HOH A 160 460 129 HOH HOH . C 3 HOH A 161 461 131 HOH HOH . C 3 HOH A 162 462 132 HOH HOH . C 3 HOH A 163 463 139 HOH HOH . C 3 HOH A 164 464 141 HOH HOH . C 3 HOH A 165 465 144 HOH HOH . C 3 HOH A 166 466 145 HOH HOH . C 3 HOH A 167 467 147 HOH HOH . C 3 HOH A 168 468 148 HOH HOH . C 3 HOH A 169 469 154 HOH HOH . C 3 HOH A 170 470 156 HOH HOH . C 3 HOH A 171 471 158 HOH HOH . C 3 HOH A 172 472 159 HOH HOH . C 3 HOH A 173 473 160 HOH HOH . C 3 HOH A 174 474 161 HOH HOH . C 3 HOH A 175 475 164 HOH HOH . C 3 HOH A 176 476 166 HOH HOH . C 3 HOH A 177 477 171 HOH HOH . C 3 HOH A 178 478 175 HOH HOH . C 3 HOH A 179 479 182 HOH HOH . C 3 HOH A 180 480 183 HOH HOH . C 3 HOH A 181 481 189 HOH HOH . C 3 HOH A 182 482 193 HOH HOH . C 3 HOH A 183 483 196 HOH HOH . C 3 HOH A 184 484 197 HOH HOH . C 3 HOH A 185 485 202 HOH HOH . C 3 HOH A 186 486 203 HOH HOH . C 3 HOH A 187 487 204 HOH HOH . C 3 HOH A 188 488 208 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 -1.387 -16.828 88.31 0.64 12.14 ? P PO4 201 A 1 HETATM 2 O O1 PO4 . . . B 2 -1.076 -17.495 86.955 0.64 14.56 ? O1 PO4 201 A 1 HETATM 3 O O2 PO4 . . . B 2 -1.1 -15.278 88.283 0.64 13.18 ? O2 PO4 201 A 1 HETATM 4 O O3 PO4 . . . B 2 -2.935 -17.021 88.562 0.64 15.65 ? O3 PO4 201 A 1 HETATM 5 O O4 PO4 . . . B 2 -0.662 -17.474 89.421 0.64 9.46 ? O4 PO4 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #