data_4YEA # _model_server_result.job_id lhA3VSx7lY77uBUdKosBtQ _model_server_result.datetime_utc '2024-11-16 05:34:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yea # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":400}' # _entry.id 4YEA # _exptl.entry_id 4YEA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4YEA _cell.length_a 78.289 _cell.length_b 78.289 _cell.length_c 54.335 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YEA _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 11 A CYS 12 1_555 C CU CU . A CU 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc2 A SG CYS 14 A CYS 15 1_555 C CU CU . A CU 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc3 C CU CU . A CU 400 1_555 B SG CYS 11 B CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc4 C CU CU . A CU 400 1_555 B SG CYS 14 B CYS 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4YEA _atom_sites.fract_transf_matrix[1][1] 0.012773 _atom_sites.fract_transf_matrix[1][2] 0.007375 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014749 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CU A 1 400 400 CU CU . D 3 SO4 A 1 401 401 SO4 SO4 . E 3 SO4 B 1 101 402 SO4 SO4 . F 3 SO4 B 1 102 71 SO4 SO4 . G 4 HOH A 1 501 106 HOH HOH . G 4 HOH A 2 502 116 HOH HOH . G 4 HOH A 3 503 141 HOH HOH . G 4 HOH A 4 504 88 HOH HOH . G 4 HOH A 5 505 73 HOH HOH . G 4 HOH A 6 506 112 HOH HOH . G 4 HOH A 7 507 114 HOH HOH . G 4 HOH A 8 508 129 HOH HOH . G 4 HOH A 9 509 111 HOH HOH . G 4 HOH A 10 510 104 HOH HOH . G 4 HOH A 11 511 113 HOH HOH . G 4 HOH A 12 512 89 HOH HOH . G 4 HOH A 13 513 125 HOH HOH . G 4 HOH A 14 514 97 HOH HOH . G 4 HOH A 15 515 140 HOH HOH . G 4 HOH A 16 516 72 HOH HOH . G 4 HOH A 17 517 74 HOH HOH . G 4 HOH A 18 518 76 HOH HOH . G 4 HOH A 19 519 78 HOH HOH . G 4 HOH A 20 520 79 HOH HOH . G 4 HOH A 21 521 80 HOH HOH . G 4 HOH A 22 522 83 HOH HOH . G 4 HOH A 23 523 84 HOH HOH . G 4 HOH A 24 524 85 HOH HOH . G 4 HOH A 25 525 86 HOH HOH . G 4 HOH A 26 526 91 HOH HOH . G 4 HOH A 27 527 92 HOH HOH . G 4 HOH A 28 528 94 HOH HOH . G 4 HOH A 29 529 95 HOH HOH . G 4 HOH A 30 530 96 HOH HOH . G 4 HOH A 31 531 100 HOH HOH . G 4 HOH A 32 532 101 HOH HOH . G 4 HOH A 33 533 103 HOH HOH . G 4 HOH A 34 534 105 HOH HOH . G 4 HOH A 35 535 107 HOH HOH . G 4 HOH A 36 536 108 HOH HOH . G 4 HOH A 37 537 115 HOH HOH . G 4 HOH A 38 538 117 HOH HOH . G 4 HOH A 39 539 132 HOH HOH . G 4 HOH A 40 540 133 HOH HOH . G 4 HOH A 41 541 138 HOH HOH . G 4 HOH A 42 542 139 HOH HOH . G 4 HOH A 43 543 125 HOH HOH . H 4 HOH B 1 201 73 HOH HOH . H 4 HOH B 2 202 124 HOH HOH . H 4 HOH B 3 203 88 HOH HOH . H 4 HOH B 4 204 92 HOH HOH . H 4 HOH B 5 205 93 HOH HOH . H 4 HOH B 6 206 106 HOH HOH . H 4 HOH B 7 207 83 HOH HOH . H 4 HOH B 8 208 84 HOH HOH . H 4 HOH B 9 209 124 HOH HOH . H 4 HOH B 10 210 128 HOH HOH . H 4 HOH B 11 211 101 HOH HOH . H 4 HOH B 12 212 75 HOH HOH . H 4 HOH B 13 213 98 HOH HOH . H 4 HOH B 14 214 131 HOH HOH . H 4 HOH B 15 215 118 HOH HOH . H 4 HOH B 16 216 129 HOH HOH . H 4 HOH B 17 217 100 HOH HOH . H 4 HOH B 18 218 127 HOH HOH . H 4 HOH B 19 219 102 HOH HOH . H 4 HOH B 20 220 77 HOH HOH . H 4 HOH B 21 221 75 HOH HOH . H 4 HOH B 22 222 82 HOH HOH . H 4 HOH B 23 223 119 HOH HOH . H 4 HOH B 24 224 120 HOH HOH . H 4 HOH B 25 225 121 HOH HOH . H 4 HOH B 26 226 122 HOH HOH . H 4 HOH B 27 227 123 HOH HOH . H 4 HOH B 28 228 126 HOH HOH . H 4 HOH B 29 229 130 HOH HOH . H 4 HOH B 30 230 134 HOH HOH . H 4 HOH B 31 231 135 HOH HOH . H 4 HOH B 32 232 136 HOH HOH . H 4 HOH B 33 233 137 HOH HOH . H 4 HOH B 34 234 72 HOH HOH . H 4 HOH B 35 235 74 HOH HOH . H 4 HOH B 36 236 76 HOH HOH . H 4 HOH B 37 237 78 HOH HOH . H 4 HOH B 38 238 80 HOH HOH . H 4 HOH B 39 239 81 HOH HOH . H 4 HOH B 40 240 82 HOH HOH . H 4 HOH B 41 241 85 HOH HOH . H 4 HOH B 42 242 86 HOH HOH . H 4 HOH B 43 243 89 HOH HOH . H 4 HOH B 44 244 90 HOH HOH . H 4 HOH B 45 245 94 HOH HOH . H 4 HOH B 46 246 97 HOH HOH . H 4 HOH B 47 247 99 HOH HOH . H 4 HOH B 48 248 102 HOH HOH . H 4 HOH B 49 249 103 HOH HOH . H 4 HOH B 50 250 105 HOH HOH . H 4 HOH B 51 251 107 HOH HOH . H 4 HOH B 52 252 108 HOH HOH . H 4 HOH B 53 253 109 HOH HOH . H 4 HOH B 54 254 110 HOH HOH . H 4 HOH B 55 255 111 HOH HOH . H 4 HOH B 56 256 113 HOH HOH . H 4 HOH B 57 257 114 HOH HOH . H 4 HOH B 58 258 115 HOH HOH . H 4 HOH B 59 259 116 HOH HOH . H 4 HOH B 60 260 119 HOH HOH . H 4 HOH B 61 261 122 HOH HOH . H 4 HOH B 62 262 123 HOH HOH . H 4 HOH B 63 263 126 HOH HOH . H 4 HOH B 64 264 127 HOH HOH . H 4 HOH B 65 265 130 HOH HOH . H 4 HOH B 66 266 131 HOH HOH . H 4 HOH B 67 267 132 HOH HOH . H 4 HOH B 68 268 133 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 24.264 _atom_site.Cartn_y -16.364 _atom_site.Cartn_z 1.145 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.24 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 400 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #