data_4YH1
#
_model_server_result.job_id            3qcZIzg_STXIMubPxdSMbg 
_model_server_result.datetime_utc      '2024-11-14 17:02:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4yh1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":301}' 
#
_entry.id    4YH1 
#
_exptl.entry_id    4YH1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.54 
_cell.angle_gamma         90 
_cell.entry_id            4YH1 
_cell.length_a            125.115 
_cell.length_b            78.804 
_cell.length_c            62.853 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4YH1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,G,I 1 1 
B,D,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C THR 7 C THR 4 1_555 C N 4CG 8 C 4CG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? 
covale ? covale2 D C THR 7 D THR 4 1_555 D N 4CG 8 D 4CG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.36 ? 
metalc ? metalc1 A OD1 ASN 24 A ASN 96 1_555 E MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc2 A O ASP 26 A ASP 98 1_555 E MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc3 A OD1 ASN 135 A ASN 207 1_555 E MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? 
metalc ? metalc4 E MG MG . A MG 301 1_555 G O HOH . A HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc5 E MG MG . A MG 301 1_555 G O HOH . A HOH 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc6 E MG MG . A MG 301 1_555 C O06 4CG 8 C 4CG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? 
metalc ? metalc7 E MG MG . A MG 301 1_555 I O HOH . C HOH 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? 
metalc ? metalc8 B O ASP 26 B ASP 98 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? 
metalc ? metalc9 B OD1 ASN 135 B ASN 207 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.818 ? 
metalc ? metalc10 F MG MG . B MG 301 1_555 H O HOH . B HOH 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? 
metalc ? metalc11 F MG MG . B MG 301 1_555 H O HOH . B HOH 466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
metalc ? metalc12 F MG MG . B MG 301 1_555 D O07 4CG 8 D 4CG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4YH1 
_atom_sites.fract_transf_matrix[1][1]    0.007993 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003317 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01269 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017226 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MG A 1 301 257 MG MG . 
F 3 MG B 1 301 257 MG MG . 
G 4 HOH A 1 401 13 HOH HOH . 
G 4 HOH A 2 402 1 HOH HOH . 
G 4 HOH A 3 403 35 HOH HOH . 
G 4 HOH A 4 404 94 HOH HOH . 
G 4 HOH A 5 405 71 HOH HOH . 
G 4 HOH A 6 406 5 HOH HOH . 
G 4 HOH A 7 407 48 HOH HOH . 
G 4 HOH A 8 408 49 HOH HOH . 
G 4 HOH A 9 409 34 HOH HOH . 
G 4 HOH A 10 410 125 HOH HOH . 
G 4 HOH A 11 411 30 HOH HOH . 
G 4 HOH A 12 412 117 HOH HOH . 
G 4 HOH A 13 413 32 HOH HOH . 
G 4 HOH A 14 414 56 HOH HOH . 
G 4 HOH A 15 415 121 HOH HOH . 
G 4 HOH A 16 416 117 HOH HOH . 
G 4 HOH A 17 417 107 HOH HOH . 
G 4 HOH A 18 418 117 HOH HOH . 
G 4 HOH A 19 419 116 HOH HOH . 
G 4 HOH A 20 420 1 HOH HOH . 
G 4 HOH A 21 421 2 HOH HOH . 
G 4 HOH A 22 422 3 HOH HOH . 
G 4 HOH A 23 423 11 HOH HOH . 
G 4 HOH A 24 424 17 HOH HOH . 
G 4 HOH A 25 425 22 HOH HOH . 
G 4 HOH A 26 426 23 HOH HOH . 
G 4 HOH A 27 427 24 HOH HOH . 
G 4 HOH A 28 428 29 HOH HOH . 
G 4 HOH A 29 429 37 HOH HOH . 
G 4 HOH A 30 430 42 HOH HOH . 
G 4 HOH A 31 431 49 HOH HOH . 
G 4 HOH A 32 432 58 HOH HOH . 
G 4 HOH A 33 433 60 HOH HOH . 
G 4 HOH A 34 434 67 HOH HOH . 
G 4 HOH A 35 435 72 HOH HOH . 
G 4 HOH A 36 436 74 HOH HOH . 
G 4 HOH A 37 437 90 HOH HOH . 
G 4 HOH A 38 438 92 HOH HOH . 
G 4 HOH A 39 439 93 HOH HOH . 
G 4 HOH A 40 440 96 HOH HOH . 
G 4 HOH A 41 441 98 HOH HOH . 
G 4 HOH A 42 442 101 HOH HOH . 
G 4 HOH A 43 443 110 HOH HOH . 
G 4 HOH A 44 444 123 HOH HOH . 
G 4 HOH A 45 445 150 HOH HOH . 
G 4 HOH A 46 446 156 HOH HOH . 
G 4 HOH A 47 447 185 HOH HOH . 
G 4 HOH A 48 448 186 HOH HOH . 
G 4 HOH A 49 449 192 HOH HOH . 
G 4 HOH A 50 450 3 HOH HOH . 
G 4 HOH A 51 451 7 HOH HOH . 
G 4 HOH A 52 452 17 HOH HOH . 
G 4 HOH A 53 453 76 HOH HOH . 
G 4 HOH A 54 454 2 HOH HOH . 
G 4 HOH A 55 455 3 HOH HOH . 
G 4 HOH A 56 456 20 HOH HOH . 
G 4 HOH A 57 457 35 HOH HOH . 
G 4 HOH A 58 458 64 HOH HOH . 
G 4 HOH A 59 459 1 HOH HOH . 
G 4 HOH A 60 460 85 HOH HOH . 
G 4 HOH A 61 461 103 HOH HOH . 
G 4 HOH A 62 462 101 HOH HOH . 
G 4 HOH A 63 463 15 HOH HOH . 
G 4 HOH A 64 464 41 HOH HOH . 
G 4 HOH A 65 465 75 HOH HOH . 
G 4 HOH A 66 466 10 HOH HOH . 
G 4 HOH A 67 467 56 HOH HOH . 
G 4 HOH A 68 468 125 HOH HOH . 
H 4 HOH B 1 401 114 HOH HOH . 
H 4 HOH B 2 402 39 HOH HOH . 
H 4 HOH B 3 403 23 HOH HOH . 
H 4 HOH B 4 404 116 HOH HOH . 
H 4 HOH B 5 405 95 HOH HOH . 
H 4 HOH B 6 406 133 HOH HOH . 
H 4 HOH B 7 407 6 HOH HOH . 
H 4 HOH B 8 408 36 HOH HOH . 
H 4 HOH B 9 409 91 HOH HOH . 
H 4 HOH B 10 410 41 HOH HOH . 
H 4 HOH B 11 411 65 HOH HOH . 
H 4 HOH B 12 412 83 HOH HOH . 
H 4 HOH B 13 413 24 HOH HOH . 
H 4 HOH B 14 414 136 HOH HOH . 
H 4 HOH B 15 415 178 HOH HOH . 
H 4 HOH B 16 416 119 HOH HOH . 
H 4 HOH B 17 417 111 HOH HOH . 
H 4 HOH B 18 418 190 HOH HOH . 
H 4 HOH B 19 419 73 HOH HOH . 
H 4 HOH B 20 420 4 HOH HOH . 
H 4 HOH B 21 421 7 HOH HOH . 
H 4 HOH B 22 422 8 HOH HOH . 
H 4 HOH B 23 423 9 HOH HOH . 
H 4 HOH B 24 424 10 HOH HOH . 
H 4 HOH B 25 425 12 HOH HOH . 
H 4 HOH B 26 426 16 HOH HOH . 
H 4 HOH B 27 427 18 HOH HOH . 
H 4 HOH B 28 428 20 HOH HOH . 
H 4 HOH B 29 429 21 HOH HOH . 
H 4 HOH B 30 430 25 HOH HOH . 
H 4 HOH B 31 431 27 HOH HOH . 
H 4 HOH B 32 432 30 HOH HOH . 
H 4 HOH B 33 433 31 HOH HOH . 
H 4 HOH B 34 434 33 HOH HOH . 
H 4 HOH B 35 435 45 HOH HOH . 
H 4 HOH B 36 436 46 HOH HOH . 
H 4 HOH B 37 437 47 HOH HOH . 
H 4 HOH B 38 438 51 HOH HOH . 
H 4 HOH B 39 439 53 HOH HOH . 
H 4 HOH B 40 440 55 HOH HOH . 
H 4 HOH B 41 441 57 HOH HOH . 
H 4 HOH B 42 442 61 HOH HOH . 
H 4 HOH B 43 443 63 HOH HOH . 
H 4 HOH B 44 444 64 HOH HOH . 
H 4 HOH B 45 445 75 HOH HOH . 
H 4 HOH B 46 446 77 HOH HOH . 
H 4 HOH B 47 447 83 HOH HOH . 
H 4 HOH B 48 448 86 HOH HOH . 
H 4 HOH B 49 449 87 HOH HOH . 
H 4 HOH B 50 450 89 HOH HOH . 
H 4 HOH B 51 451 108 HOH HOH . 
H 4 HOH B 52 452 118 HOH HOH . 
H 4 HOH B 53 453 126 HOH HOH . 
H 4 HOH B 54 454 130 HOH HOH . 
H 4 HOH B 55 455 168 HOH HOH . 
H 4 HOH B 56 456 169 HOH HOH . 
H 4 HOH B 57 457 189 HOH HOH . 
H 4 HOH B 58 458 193 HOH HOH . 
H 4 HOH B 59 459 5 HOH HOH . 
H 4 HOH B 60 460 9 HOH HOH . 
H 4 HOH B 61 461 11 HOH HOH . 
H 4 HOH B 62 462 47 HOH HOH . 
H 4 HOH B 63 463 70 HOH HOH . 
H 4 HOH B 64 464 91 HOH HOH . 
H 4 HOH B 65 465 118 HOH HOH . 
H 4 HOH B 66 466 9 HOH HOH . 
H 4 HOH B 67 467 9 HOH HOH . 
H 4 HOH B 68 468 19 HOH HOH . 
H 4 HOH B 69 469 46 HOH HOH . 
I 4 HOH C 1 101 79 HOH HOH . 
I 4 HOH C 2 102 81 HOH HOH . 
I 4 HOH C 3 103 102 HOH HOH . 
I 4 HOH C 4 104 2 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               178.589 
_atom_site.Cartn_y               11.15 
_atom_site.Cartn_z               5.89 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        54.78 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           30 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           359 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#