data_4YHZ # _model_server_result.job_id hJG9XK6In8Iuw16TUEueSg _model_server_result.datetime_utc '2024-12-26 13:29:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yhz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":303}' # _entry.id 4YHZ # _exptl.entry_id 4YHZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4YHZ _cell.length_a 130.375 _cell.length_b 130.375 _cell.length_c 96.365 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YHZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 64.243333 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf2 A SG CYS 148 H CYS 148 1_555 A SG CYS 204 H CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 B SG CYS 22 L CYS 22 1_555 B SG CYS 87 L CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf4 B SG CYS 135 L CYS 135 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? covale ? covale1 C C THR 3 P THR 3 1_555 C N M3L 4 P M3L 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 C C M3L 4 P M3L 4 1_555 C N GLN 5 P GLN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 336 n n S O2 SO4 doub 337 n n S O3 SO4 sing 338 n n S O4 SO4 sing 339 n n # _atom_sites.entry_id 4YHZ _atom_sites.fract_transf_matrix[1][1] 0.00767 _atom_sites.fract_transf_matrix[1][2] 0.004428 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008857 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010377 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GOL H 1 301 1 GOL GOL . E 4 GOL H 1 302 2 GOL GOL . F 4 GOL H 1 303 5 GOL GOL . G 4 GOL H 1 304 6 GOL GOL . H 4 GOL H 1 305 8 GOL GOL . I 4 GOL L 1 301 3 GOL GOL . J 4 GOL L 1 302 7 GOL GOL . K 5 SO4 L 1 303 1 SO4 SO4 . L 6 HOH H 1 401 159 HOH HOH . L 6 HOH H 2 402 134 HOH HOH . L 6 HOH H 3 403 13 HOH HOH . L 6 HOH H 4 404 14 HOH HOH . L 6 HOH H 5 405 96 HOH HOH . L 6 HOH H 6 406 53 HOH HOH . L 6 HOH H 7 407 2 HOH HOH . L 6 HOH H 8 408 11 HOH HOH . L 6 HOH H 9 409 58 HOH HOH . L 6 HOH H 10 410 101 HOH HOH . L 6 HOH H 11 411 32 HOH HOH . L 6 HOH H 12 412 4 HOH HOH . L 6 HOH H 13 413 65 HOH HOH . L 6 HOH H 14 414 151 HOH HOH . L 6 HOH H 15 415 7 HOH HOH . L 6 HOH H 16 416 26 HOH HOH . L 6 HOH H 17 417 124 HOH HOH . L 6 HOH H 18 418 10 HOH HOH . L 6 HOH H 19 419 36 HOH HOH . L 6 HOH H 20 420 64 HOH HOH . L 6 HOH H 21 421 41 HOH HOH . L 6 HOH H 22 422 110 HOH HOH . L 6 HOH H 23 423 98 HOH HOH . L 6 HOH H 24 424 31 HOH HOH . L 6 HOH H 25 425 5 HOH HOH . L 6 HOH H 26 426 149 HOH HOH . L 6 HOH H 27 427 6 HOH HOH . L 6 HOH H 28 428 28 HOH HOH . L 6 HOH H 29 429 105 HOH HOH . L 6 HOH H 30 430 68 HOH HOH . L 6 HOH H 31 431 62 HOH HOH . L 6 HOH H 32 432 152 HOH HOH . L 6 HOH H 33 433 171 HOH HOH . L 6 HOH H 34 434 99 HOH HOH . L 6 HOH H 35 435 106 HOH HOH . L 6 HOH H 36 436 109 HOH HOH . L 6 HOH H 37 437 44 HOH HOH . L 6 HOH H 38 438 78 HOH HOH . L 6 HOH H 39 439 114 HOH HOH . L 6 HOH H 40 440 8 HOH HOH . L 6 HOH H 41 441 61 HOH HOH . L 6 HOH H 42 442 56 HOH HOH . L 6 HOH H 43 443 1 HOH HOH . L 6 HOH H 44 444 119 HOH HOH . L 6 HOH H 45 445 25 HOH HOH . L 6 HOH H 46 446 42 HOH HOH . L 6 HOH H 47 447 138 HOH HOH . L 6 HOH H 48 448 54 HOH HOH . L 6 HOH H 49 449 77 HOH HOH . L 6 HOH H 50 450 67 HOH HOH . L 6 HOH H 51 451 15 HOH HOH . L 6 HOH H 52 452 165 HOH HOH . L 6 HOH H 53 453 82 HOH HOH . L 6 HOH H 54 454 17 HOH HOH . L 6 HOH H 55 455 164 HOH HOH . L 6 HOH H 56 456 158 HOH HOH . L 6 HOH H 57 457 104 HOH HOH . L 6 HOH H 58 458 112 HOH HOH . L 6 HOH H 59 459 83 HOH HOH . L 6 HOH H 60 460 81 HOH HOH . L 6 HOH H 61 461 39 HOH HOH . L 6 HOH H 62 462 100 HOH HOH . L 6 HOH H 63 463 91 HOH HOH . L 6 HOH H 64 464 168 HOH HOH . L 6 HOH H 65 465 127 HOH HOH . L 6 HOH H 66 466 50 HOH HOH . L 6 HOH H 67 467 48 HOH HOH . L 6 HOH H 68 468 167 HOH HOH . L 6 HOH H 69 469 131 HOH HOH . L 6 HOH H 70 470 123 HOH HOH . L 6 HOH H 71 471 111 HOH HOH . L 6 HOH H 72 472 174 HOH HOH . L 6 HOH H 73 473 79 HOH HOH . L 6 HOH H 74 474 30 HOH HOH . L 6 HOH H 75 475 150 HOH HOH . L 6 HOH H 76 476 142 HOH HOH . L 6 HOH H 77 477 60 HOH HOH . L 6 HOH H 78 478 40 HOH HOH . L 6 HOH H 79 479 140 HOH HOH . L 6 HOH H 80 480 172 HOH HOH . L 6 HOH H 81 481 103 HOH HOH . L 6 HOH H 82 482 125 HOH HOH . L 6 HOH H 83 483 153 HOH HOH . L 6 HOH H 84 484 92 HOH HOH . L 6 HOH H 85 485 163 HOH HOH . L 6 HOH H 86 486 115 HOH HOH . L 6 HOH H 87 487 72 HOH HOH . L 6 HOH H 88 488 137 HOH HOH . L 6 HOH H 89 489 93 HOH HOH . L 6 HOH H 90 490 166 HOH HOH . L 6 HOH H 91 491 84 HOH HOH . M 6 HOH L 1 401 145 HOH HOH . M 6 HOH L 2 402 128 HOH HOH . M 6 HOH L 3 403 29 HOH HOH . M 6 HOH L 4 404 34 HOH HOH . M 6 HOH L 5 405 9 HOH HOH . M 6 HOH L 6 406 35 HOH HOH . M 6 HOH L 7 407 66 HOH HOH . M 6 HOH L 8 408 12 HOH HOH . M 6 HOH L 9 409 19 HOH HOH . M 6 HOH L 10 410 59 HOH HOH . M 6 HOH L 11 411 108 HOH HOH . M 6 HOH L 12 412 116 HOH HOH . M 6 HOH L 13 413 51 HOH HOH . M 6 HOH L 14 414 24 HOH HOH . M 6 HOH L 15 415 146 HOH HOH . M 6 HOH L 16 416 69 HOH HOH . M 6 HOH L 17 417 155 HOH HOH . M 6 HOH L 18 418 113 HOH HOH . M 6 HOH L 19 419 143 HOH HOH . M 6 HOH L 20 420 16 HOH HOH . M 6 HOH L 21 421 161 HOH HOH . M 6 HOH L 22 422 136 HOH HOH . M 6 HOH L 23 423 89 HOH HOH . M 6 HOH L 24 424 3 HOH HOH . M 6 HOH L 25 425 33 HOH HOH . M 6 HOH L 26 426 47 HOH HOH . M 6 HOH L 27 427 126 HOH HOH . M 6 HOH L 28 428 45 HOH HOH . M 6 HOH L 29 429 129 HOH HOH . M 6 HOH L 30 430 43 HOH HOH . M 6 HOH L 31 431 122 HOH HOH . M 6 HOH L 32 432 74 HOH HOH . M 6 HOH L 33 433 133 HOH HOH . M 6 HOH L 34 434 130 HOH HOH . M 6 HOH L 35 435 18 HOH HOH . M 6 HOH L 36 436 117 HOH HOH . M 6 HOH L 37 437 23 HOH HOH . M 6 HOH L 38 438 21 HOH HOH . M 6 HOH L 39 439 38 HOH HOH . M 6 HOH L 40 440 144 HOH HOH . M 6 HOH L 41 441 169 HOH HOH . M 6 HOH L 42 442 76 HOH HOH . M 6 HOH L 43 443 139 HOH HOH . M 6 HOH L 44 444 70 HOH HOH . M 6 HOH L 45 445 22 HOH HOH . M 6 HOH L 46 446 75 HOH HOH . M 6 HOH L 47 447 94 HOH HOH . M 6 HOH L 48 448 73 HOH HOH . M 6 HOH L 49 449 95 HOH HOH . M 6 HOH L 50 450 154 HOH HOH . M 6 HOH L 51 451 49 HOH HOH . M 6 HOH L 52 452 55 HOH HOH . M 6 HOH L 53 453 102 HOH HOH . M 6 HOH L 54 454 157 HOH HOH . M 6 HOH L 55 455 90 HOH HOH . M 6 HOH L 56 456 118 HOH HOH . M 6 HOH L 57 457 121 HOH HOH . M 6 HOH L 58 458 86 HOH HOH . M 6 HOH L 59 459 52 HOH HOH . M 6 HOH L 60 460 46 HOH HOH . M 6 HOH L 61 461 141 HOH HOH . M 6 HOH L 62 462 107 HOH HOH . M 6 HOH L 63 463 173 HOH HOH . M 6 HOH L 64 464 57 HOH HOH . M 6 HOH L 65 465 147 HOH HOH . M 6 HOH L 66 466 120 HOH HOH . M 6 HOH L 67 467 63 HOH HOH . M 6 HOH L 68 468 87 HOH HOH . M 6 HOH L 69 469 135 HOH HOH . M 6 HOH L 70 470 97 HOH HOH . M 6 HOH L 71 471 160 HOH HOH . M 6 HOH L 72 472 148 HOH HOH . M 6 HOH L 73 473 156 HOH HOH . M 6 HOH L 74 474 132 HOH HOH . M 6 HOH L 75 475 80 HOH HOH . M 6 HOH L 76 476 71 HOH HOH . N 6 HOH P 1 101 20 HOH HOH . N 6 HOH P 2 102 37 HOH HOH . N 6 HOH P 3 103 27 HOH HOH . N 6 HOH P 4 104 88 HOH HOH . N 6 HOH P 5 105 170 HOH HOH . N 6 HOH P 6 106 85 HOH HOH . N 6 HOH P 7 107 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . K 5 -79.995 20.608 35.699 1 84.83 ? S SO4 303 L 1 HETATM 2 O O1 SO4 . . . K 5 -81.216 20.579 34.792 1 76.59 ? O1 SO4 303 L 1 HETATM 3 O O2 SO4 . . . K 5 -78.779 20.765 34.826 1 74.43 ? O2 SO4 303 L 1 HETATM 4 O O3 SO4 . . . K 5 -80.039 21.786 36.644 1 85.42 ? O3 SO4 303 L 1 HETATM 5 O O4 SO4 . . . K 5 -79.89 19.332 36.508 1 66.05 ? O4 SO4 303 L 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #