data_4YIY
#
_model_server_result.job_id            4i9u2KEC-f67FOifK8Vkyg 
_model_server_result.datetime_utc      '2024-10-20 12:39:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4yiy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":702}' 
#
_entry.id    4YIY 
#
_exptl.entry_id    4YIY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          120.03 
_cell.angle_gamma         90 
_cell.entry_id            4YIY 
_cell.length_a            103.181 
_cell.length_b            71.522 
_cell.length_c            103.543 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4YIY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 G N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A CA GLY 75 B GLY 63 1_555 B NH1 ARG 592 A ARG 580 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.585 ? 
covale ? covale2 A C GLY 75 B GLY 63 1_555 B CZ ARG 592 A ARG 580 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.275 ? 
covale ? covale3 A N ARG 76 B ARG 64 1_555 B NH2 ARG 592 A ARG 580 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.189 ? 
covale ? covale4 A N ARG 76 B ARG 64 1_555 B NH1 ARG 592 A ARG 580 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale5 A CA ARG 76 B ARG 64 1_555 B NH2 ARG 592 A ARG 580 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.22 ? 
covale ? covale6 A CA ARG 76 B ARG 64 1_555 B CZ ARG 592 A ARG 580 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.245 ? 
covale ? covale7 A CA ARG 76 B ARG 64 1_555 B NE ARG 592 A ARG 580 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.398 ? 
covale ? covale8 A CA LEU 81 B LEU 69 1_555 B NH2 ARG 644 A ARG 632 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale9 A C LEU 81 B LEU 69 1_555 B CZ ARG 644 A ARG 632 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.384 ? 
covale ? covale10 A N ARG 82 B ARG 70 1_555 B NE ARG 644 A ARG 632 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.392 ? 
covale ? covale11 A CA ARG 82 B ARG 70 1_555 B CZ ARG 644 A ARG 632 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.505 ? 
covale ? covale12 A CA ARG 82 B ARG 70 1_555 B CD ARG 644 A ARG 632 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.619 ? 
covale ? covale13 A C ARG 82 B ARG 70 1_555 B NE ARG 644 A ARG 632 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.265 ? 
covale ? covale14 A N SER 83 B SER 71 1_555 B NH1 ARG 644 A ARG 632 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.267 ? 
covale ? covale15 A CB GLU 596 B GLU 584 1_555 B NH2 ARG 76 A ARG 64 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
covale ? covale16 A CB GLU 596 B GLU 584 1_555 B CZ ARG 76 A ARG 64 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.582 ? 
covale ? covale17 A CB GLU 596 B GLU 584 1_555 B NH1 ARG 76 A ARG 64 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.475 ? 
covale ? covale18 A CG GLU 596 B GLU 584 1_555 B CZ ARG 76 A ARG 64 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.078 ? 
covale ? covale19 A OE1 GLU 596 B GLU 584 1_555 B CD ARG 76 A ARG 64 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.285 ? 
covale ? covale20 A OE1 GLU 596 B GLU 584 1_555 B CZ ARG 76 A ARG 64 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.371 ? 
metalc ? metalc1 A OG SER 332 B SER 320 1_555 D MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc2 A OG SER 332 B SER 320 1_555 E MG MG . B MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.836 ? 
metalc ? metalc3 C O3G ANP . B ANP 701 1_555 D MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? 
metalc ? metalc4 C O1A ANP . B ANP 701 1_555 E MG MG . B MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? 
metalc ? metalc5 B OG SER 332 A SER 320 1_555 H MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc6 F O2G ANP . A ANP 701 1_555 G MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.731 ? 
metalc ? metalc7 F O1B ANP . A ANP 701 1_555 G MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? 
metalc ? metalc8 F O2G ANP . A ANP 701 1_555 H MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc9 F O1B ANP . A ANP 701 1_555 H MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc10 F O1A ANP . A ANP 701 1_555 H MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.949 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4YIY 
_atom_sites.fract_transf_matrix[1][1]    0.009692 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005603 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013982 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011156 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ANP B 1 701 3 ANP ANP . 
D 3 MG B 1 702 4 MG MG . 
E 3 MG B 1 703 5 MG MG . 
F 2 ANP A 1 701 2 ANP ANP . 
G 3 MG A 1 702 1 MG MG . 
H 3 MG A 1 703 2 MG MG . 
I 4 HOH B 1 801 9 HOH HOH . 
I 4 HOH B 2 802 12 HOH HOH . 
I 4 HOH B 3 803 8 HOH HOH . 
I 4 HOH B 4 804 14 HOH HOH . 
I 4 HOH B 5 805 4 HOH HOH . 
I 4 HOH B 6 806 13 HOH HOH . 
I 4 HOH B 7 807 7 HOH HOH . 
I 4 HOH B 8 808 5 HOH HOH . 
I 4 HOH B 9 809 17 HOH HOH . 
I 4 HOH B 10 810 11 HOH HOH . 
I 4 HOH B 11 811 3 HOH HOH . 
I 4 HOH B 12 812 10 HOH HOH . 
J 4 HOH A 1 801 22 HOH HOH . 
J 4 HOH A 2 802 19 HOH HOH . 
J 4 HOH A 3 803 6 HOH HOH . 
J 4 HOH A 4 804 21 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -85.804 
_atom_site.Cartn_y               17.384 
_atom_site.Cartn_z               29.519 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        45.63 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           702 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#