data_4YJF # _model_server_result.job_id 3zpG4PFO5O5-d0UsGagtVw _model_server_result.datetime_utc '2024-11-30 07:18:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yjf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 4YJF # _exptl.entry_id 4YJF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4YJF _cell.length_a 68.844 _cell.length_b 91.973 _cell.length_c 110.178 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YJF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 H N N ? 4 I N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 401 n n S O2 SO4 doub 402 n n S O3 SO4 sing 403 n n S O4 SO4 sing 404 n n # _atom_sites.entry_id 4YJF _atom_sites.fract_transf_matrix[1][1] 0.014526 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010873 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009076 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FAD A 1 401 2 FAD FAD . D 4 SO4 A 1 402 7 SO4 SO4 . E 4 SO4 A 1 403 8 SO4 SO4 . F 5 98B A 1 404 2 98B 98B . G 3 FAD B 1 401 1 FAD FAD . H 4 SO4 B 1 402 5 SO4 SO4 . I 4 SO4 B 1 403 6 SO4 SO4 . J 5 98B B 1 404 1 98B 98B . K 6 HOH A 1 501 21 HOH HOH . K 6 HOH A 2 502 49 HOH HOH . K 6 HOH A 3 503 6 HOH HOH . K 6 HOH A 4 504 11 HOH HOH . K 6 HOH A 5 505 14 HOH HOH . K 6 HOH A 6 506 16 HOH HOH . K 6 HOH A 7 507 18 HOH HOH . K 6 HOH A 8 508 22 HOH HOH . K 6 HOH A 9 509 23 HOH HOH . K 6 HOH A 10 510 29 HOH HOH . K 6 HOH A 11 511 30 HOH HOH . K 6 HOH A 12 512 31 HOH HOH . K 6 HOH A 13 513 36 HOH HOH . K 6 HOH A 14 514 37 HOH HOH . K 6 HOH A 15 515 38 HOH HOH . K 6 HOH A 16 516 40 HOH HOH . K 6 HOH A 17 517 43 HOH HOH . K 6 HOH A 18 518 47 HOH HOH . K 6 HOH A 19 519 51 HOH HOH . K 6 HOH A 20 520 57 HOH HOH . K 6 HOH A 21 521 60 HOH HOH . K 6 HOH A 22 522 62 HOH HOH . K 6 HOH A 23 523 2 HOH HOH . K 6 HOH A 24 524 4 HOH HOH . K 6 HOH A 25 525 9 HOH HOH . L 6 HOH B 1 501 8 HOH HOH . L 6 HOH B 2 502 5 HOH HOH . L 6 HOH B 3 503 55 HOH HOH . L 6 HOH B 4 504 46 HOH HOH . L 6 HOH B 5 505 10 HOH HOH . L 6 HOH B 6 506 12 HOH HOH . L 6 HOH B 7 507 13 HOH HOH . L 6 HOH B 8 508 15 HOH HOH . L 6 HOH B 9 509 17 HOH HOH . L 6 HOH B 10 510 19 HOH HOH . L 6 HOH B 11 511 20 HOH HOH . L 6 HOH B 12 512 24 HOH HOH . L 6 HOH B 13 513 25 HOH HOH . L 6 HOH B 14 514 26 HOH HOH . L 6 HOH B 15 515 27 HOH HOH . L 6 HOH B 16 516 32 HOH HOH . L 6 HOH B 17 517 34 HOH HOH . L 6 HOH B 18 518 35 HOH HOH . L 6 HOH B 19 519 39 HOH HOH . L 6 HOH B 20 520 41 HOH HOH . L 6 HOH B 21 521 42 HOH HOH . L 6 HOH B 22 522 44 HOH HOH . L 6 HOH B 23 523 45 HOH HOH . L 6 HOH B 24 524 52 HOH HOH . L 6 HOH B 25 525 54 HOH HOH . L 6 HOH B 26 526 61 HOH HOH . L 6 HOH B 27 527 1 HOH HOH . L 6 HOH B 28 528 3 HOH HOH . L 6 HOH B 29 529 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 4 9.625 -3.236 11.315 1 35.56 ? S SO4 402 A 1 HETATM 2 O O1 SO4 . . . D 4 9.083 -3.765 10.032 1 48.62 ? O1 SO4 402 A 1 HETATM 3 O O2 SO4 . . . D 4 10.105 -1.85 11.106 1 34.17 ? O2 SO4 402 A 1 HETATM 4 O O3 SO4 . . . D 4 8.518 -3.239 12.301 1 48.6 ? O3 SO4 402 A 1 HETATM 5 O O4 SO4 . . . D 4 10.708 -4.138 11.776 1 34.76 ? O4 SO4 402 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 5 #