data_4YJH
#
_model_server_result.job_id            KDvbWJ06xUTtPf02sJ9fSQ 
_model_server_result.datetime_utc      '2024-11-12 21:40:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4yjh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    4YJH 
#
_exptl.entry_id    4YJH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              147.217 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2R)-2-phenylpyrrolidine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4YJH 
_cell.length_a            68.281 
_cell.length_b            91.202 
_cell.length_c            110.007 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4YJH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 F N N 
#
_chem_comp.formula           'C10 H13 N' 
_chem_comp.formula_weight    147.217 
_chem_comp.id                96B 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2R)-2-phenylpyrrolidine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C3 96B sing 1 n n 
C C1 96B sing 2 n n 
C3 N 96B sing 3 n n 
C1 C2 96B sing 4 n n 
N C2 96B sing 5 n n 
C2 C4 96B sing 6 n n 
C4 C5 96B doub 7 n y 
C4 C9 96B sing 8 n y 
C5 C6 96B sing 9 n y 
C9 C8 96B doub 10 n y 
C6 C7 96B doub 11 n y 
C8 C7 96B sing 12 n y 
N H1 96B sing 13 n n 
C3 H3 96B sing 14 n n 
C3 H4 96B sing 15 n n 
C H5 96B sing 16 n n 
C H6 96B sing 17 n n 
C1 H7 96B sing 18 n n 
C1 H8 96B sing 19 n n 
C2 H9 96B sing 20 n n 
C9 H10 96B sing 21 n n 
C5 H11 96B sing 22 n n 
C6 H12 96B sing 23 n n 
C7 H13 96B sing 24 n n 
C8 H14 96B sing 25 n n 
#
_atom_sites.entry_id                     4YJH 
_atom_sites.fract_transf_matrix[1][1]    0.014645 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010965 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00909 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 96B A 1 401 1 96B 96B . 
D 4 FAD A 1 402 2 FAD FAD . 
E 5 SO4 A 1 403 6 SO4 SO4 . 
F 3 96B B 1 401 2 96B 96B . 
G 4 FAD B 1 402 1 FAD FAD . 
H 5 SO4 B 1 403 3 SO4 SO4 . 
I 5 SO4 B 1 404 4 SO4 SO4 . 
J 6 HOH A 1 501 1 HOH HOH . 
J 6 HOH A 2 502 4 HOH HOH . 
J 6 HOH A 3 503 5 HOH HOH . 
J 6 HOH A 4 504 8 HOH HOH . 
J 6 HOH A 5 505 11 HOH HOH . 
J 6 HOH A 6 506 12 HOH HOH . 
J 6 HOH A 7 507 15 HOH HOH . 
K 6 HOH B 1 501 14 HOH HOH . 
K 6 HOH B 2 502 2 HOH HOH . 
K 6 HOH B 3 503 3 HOH HOH . 
K 6 HOH B 4 504 6 HOH HOH . 
K 6 HOH B 5 505 7 HOH HOH . 
K 6 HOH B 6 506 9 HOH HOH . 
K 6 HOH B 7 507 10 HOH HOH . 
K 6 HOH B 8 508 13 HOH HOH . 
K 6 HOH B 9 509 16 HOH HOH . 
K 6 HOH B 10 510 17 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N 96B . . . C 3 -22.727 -14.635 10.821 1 67.77 ? N 96B 401 A 1 
HETATM 2 C C3 96B . . . C 3 -22.299 -15.955 10.302 1 66.82 ? C3 96B 401 A 1 
HETATM 3 C C 96B . . . C 3 -23.562 -16.803 10.126 1 69.73 ? C 96B 401 A 1 
HETATM 4 C C1 96B . . . C 3 -24.743 -15.904 10.5 1 68.22 ? C1 96B 401 A 1 
HETATM 5 C C2 96B . . . C 3 -24.096 -14.832 11.352 1 58.5 ? C2 96B 401 A 1 
HETATM 6 C C4 96B . . . C 3 -24.885 -13.6 11.584 1 53.94 ? C4 96B 401 A 1 
HETATM 7 C C9 96B . . . C 3 -24.245 -12.377 11.796 1 57.12 ? C9 96B 401 A 1 
HETATM 8 C C5 96B . . . C 3 -26.266 -13.68 11.733 1 53.55 ? C5 96B 401 A 1 
HETATM 9 C C6 96B . . . C 3 -27.007 -12.539 12.025 1 50.91 ? C6 96B 401 A 1 
HETATM 10 C C7 96B . . . C 3 -26.369 -11.318 12.203 1 51.7 ? C7 96B 401 A 1 
HETATM 11 C C8 96B . . . C 3 -24.985 -11.234 12.088 1 55.15 ? C8 96B 401 A 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           11 
#