data_4YJS # _model_server_result.job_id 7EnooMVieArMokh6K1gchg _model_server_result.datetime_utc '2025-06-26 10:31:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yjs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 4YJS # _exptl.entry_id 4YJS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 451.502 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[{2-[(1,1-dioxido-2,3-dihydro-1,2-benzothiazol-6-yl)amino]pyrimidin-4-yl}(1H-indazol-4-yl)amino]propan-1-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.38 _cell.angle_gamma 90 _cell.entry_id 4YJS _cell.length_a 38.407 _cell.length_b 84.617 _cell.length_c 39.756 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YJS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H21 N7 O3 S' _chem_comp.formula_weight 451.502 _chem_comp.id 4DN _chem_comp.mon_nstd_flag . _chem_comp.name 3-[{2-[(1,1-dioxido-2,3-dihydro-1,2-benzothiazol-6-yl)amino]pyrimidin-4-yl}(1H-indazol-4-yl)amino]propan-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 C29 4DN doub 1 n y C28 C27 4DN sing 2 n y C29 C30 4DN sing 3 n y C27 N26 4DN sing 4 n y C27 C23 4DN doub 5 n y N26 N25 4DN sing 6 n y C30 C22 4DN doub 7 n y C23 C22 4DN sing 8 n y C23 C24 4DN sing 9 n y N25 C24 4DN doub 10 n y C22 N19 4DN sing 11 n n C16 C15 4DN doub 12 n y C16 C18 4DN sing 13 n y C15 N14 4DN sing 14 n y N19 C18 4DN sing 15 n n N19 C20 4DN sing 16 n n C18 N17 4DN doub 17 n y C20 C21 4DN sing 18 n n N14 C13 4DN doub 19 n y N17 C13 4DN sing 20 n y C21 C32 4DN sing 21 n n O31 C32 4DN sing 22 n n C13 N12 4DN sing 23 n n N12 C11 4DN sing 24 n n C11 C10 4DN doub 25 n y C11 C9 4DN sing 26 n y C10 C6 4DN sing 27 n y O3 S2 4DN doub 28 n n C9 C8 4DN doub 29 n y C6 S2 4DN sing 30 n n C6 C7 4DN doub 31 n y S2 O1 4DN doub 32 n n S2 N4 4DN sing 33 n n C8 C7 4DN sing 34 n y C7 C5 4DN sing 35 n n N4 C5 4DN sing 36 n n C10 H1 4DN sing 37 n n C9 H2 4DN sing 38 n n C8 H3 4DN sing 39 n n C5 H4 4DN sing 40 n n C5 H5 4DN sing 41 n n N4 H6 4DN sing 42 n n N12 H7 4DN sing 43 n n C16 H8 4DN sing 44 n n C15 H9 4DN sing 45 n n C20 H10 4DN sing 46 n n C20 H11 4DN sing 47 n n C21 H12 4DN sing 48 n n C21 H13 4DN sing 49 n n C32 H14 4DN sing 50 n n C32 H15 4DN sing 51 n n O31 H16 4DN sing 52 n n C30 H17 4DN sing 53 n n C29 H18 4DN sing 54 n n C28 H19 4DN sing 55 n n N26 H20 4DN sing 56 n n C24 H21 4DN sing 57 n n # _atom_sites.entry_id 4YJS _atom_sites.fract_transf_matrix[1][1] 0.026037 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004767 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011818 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025572 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4DN A 1 701 1 4DN UNL . C 3 HOH A 1 801 5 HOH HOH . C 3 HOH A 2 802 96 HOH HOH . C 3 HOH A 3 803 44 HOH HOH . C 3 HOH A 4 804 103 HOH HOH . C 3 HOH A 5 805 2 HOH HOH . C 3 HOH A 6 806 37 HOH HOH . C 3 HOH A 7 807 56 HOH HOH . C 3 HOH A 8 808 110 HOH HOH . C 3 HOH A 9 809 87 HOH HOH . C 3 HOH A 10 810 67 HOH HOH . C 3 HOH A 11 811 89 HOH HOH . C 3 HOH A 12 812 113 HOH HOH . C 3 HOH A 13 813 27 HOH HOH . C 3 HOH A 14 814 49 HOH HOH . C 3 HOH A 15 815 115 HOH HOH . C 3 HOH A 16 816 55 HOH HOH . C 3 HOH A 17 817 12 HOH HOH . C 3 HOH A 18 818 69 HOH HOH . C 3 HOH A 19 819 93 HOH HOH . C 3 HOH A 20 820 114 HOH HOH . C 3 HOH A 21 821 41 HOH HOH . C 3 HOH A 22 822 28 HOH HOH . C 3 HOH A 23 823 10 HOH HOH . C 3 HOH A 24 824 88 HOH HOH . C 3 HOH A 25 825 68 HOH HOH . C 3 HOH A 26 826 4 HOH HOH . C 3 HOH A 27 827 20 HOH HOH . C 3 HOH A 28 828 60 HOH HOH . C 3 HOH A 29 829 82 HOH HOH . C 3 HOH A 30 830 107 HOH HOH . C 3 HOH A 31 831 80 HOH HOH . C 3 HOH A 32 832 83 HOH HOH . C 3 HOH A 33 833 51 HOH HOH . C 3 HOH A 34 834 38 HOH HOH . C 3 HOH A 35 835 108 HOH HOH . C 3 HOH A 36 836 31 HOH HOH . C 3 HOH A 37 837 62 HOH HOH . C 3 HOH A 38 838 106 HOH HOH . C 3 HOH A 39 839 53 HOH HOH . C 3 HOH A 40 840 79 HOH HOH . C 3 HOH A 41 841 6 HOH HOH . C 3 HOH A 42 842 118 HOH HOH . C 3 HOH A 43 843 84 HOH HOH . C 3 HOH A 44 844 63 HOH HOH . C 3 HOH A 45 845 72 HOH HOH . C 3 HOH A 46 846 76 HOH HOH . C 3 HOH A 47 847 75 HOH HOH . C 3 HOH A 48 848 81 HOH HOH . C 3 HOH A 49 849 100 HOH HOH . C 3 HOH A 50 850 47 HOH HOH . C 3 HOH A 51 851 85 HOH HOH . C 3 HOH A 52 852 101 HOH HOH . C 3 HOH A 53 853 86 HOH HOH . C 3 HOH A 54 854 1 HOH HOH . C 3 HOH A 55 855 3 HOH HOH . C 3 HOH A 56 856 7 HOH HOH . C 3 HOH A 57 857 8 HOH HOH . C 3 HOH A 58 858 9 HOH HOH . C 3 HOH A 59 859 11 HOH HOH . C 3 HOH A 60 860 13 HOH HOH . C 3 HOH A 61 861 14 HOH HOH . C 3 HOH A 62 862 15 HOH HOH . C 3 HOH A 63 863 16 HOH HOH . C 3 HOH A 64 864 17 HOH HOH . C 3 HOH A 65 865 18 HOH HOH . C 3 HOH A 66 866 19 HOH HOH . C 3 HOH A 67 867 21 HOH HOH . C 3 HOH A 68 868 22 HOH HOH . C 3 HOH A 69 869 23 HOH HOH . C 3 HOH A 70 870 24 HOH HOH . C 3 HOH A 71 871 25 HOH HOH . C 3 HOH A 72 872 26 HOH HOH . C 3 HOH A 73 873 29 HOH HOH . C 3 HOH A 74 874 30 HOH HOH . C 3 HOH A 75 875 32 HOH HOH . C 3 HOH A 76 876 33 HOH HOH . C 3 HOH A 77 877 34 HOH HOH . C 3 HOH A 78 878 35 HOH HOH . C 3 HOH A 79 879 36 HOH HOH . C 3 HOH A 80 880 39 HOH HOH . C 3 HOH A 81 881 40 HOH HOH . C 3 HOH A 82 882 42 HOH HOH . C 3 HOH A 83 883 43 HOH HOH . C 3 HOH A 84 884 45 HOH HOH . C 3 HOH A 85 885 46 HOH HOH . C 3 HOH A 86 886 48 HOH HOH . C 3 HOH A 87 887 50 HOH HOH . C 3 HOH A 88 888 52 HOH HOH . C 3 HOH A 89 889 54 HOH HOH . C 3 HOH A 90 890 57 HOH HOH . C 3 HOH A 91 891 58 HOH HOH . C 3 HOH A 92 892 59 HOH HOH . C 3 HOH A 93 893 61 HOH HOH . C 3 HOH A 94 894 64 HOH HOH . C 3 HOH A 95 895 65 HOH HOH . C 3 HOH A 96 896 66 HOH HOH . C 3 HOH A 97 897 70 HOH HOH . C 3 HOH A 98 898 71 HOH HOH . C 3 HOH A 99 899 73 HOH HOH . C 3 HOH A 100 900 74 HOH HOH . C 3 HOH A 101 901 77 HOH HOH . C 3 HOH A 102 902 78 HOH HOH . C 3 HOH A 103 903 90 HOH HOH . C 3 HOH A 104 904 91 HOH HOH . C 3 HOH A 105 905 92 HOH HOH . C 3 HOH A 106 906 94 HOH HOH . C 3 HOH A 107 907 95 HOH HOH . C 3 HOH A 108 908 97 HOH HOH . C 3 HOH A 109 909 98 HOH HOH . C 3 HOH A 110 910 99 HOH HOH . C 3 HOH A 111 911 102 HOH HOH . C 3 HOH A 112 912 104 HOH HOH . C 3 HOH A 113 913 105 HOH HOH . C 3 HOH A 114 914 109 HOH HOH . C 3 HOH A 115 915 111 HOH HOH . C 3 HOH A 116 916 112 HOH HOH . C 3 HOH A 117 917 116 HOH HOH . C 3 HOH A 118 918 117 HOH HOH . C 3 HOH A 119 919 119 HOH HOH . C 3 HOH A 120 920 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 4DN . . . B 2 20.14 -41.237 37.078 1 44.89 ? O3 4DN 701 A 1 HETATM 2 S S2 4DN . . . B 2 21.08 -41.15 38.149 1 42.87 ? S2 4DN 701 A 1 HETATM 3 O O1 4DN . . . B 2 21.379 -39.834 38.638 1 46.86 ? O1 4DN 701 A 1 HETATM 4 C C6 4DN . . . B 2 22.533 -42.034 37.83 1 39.47 ? C6 4DN 701 A 1 HETATM 5 C C10 4DN . . . B 2 23.31 -41.886 36.703 1 42.02 ? C10 4DN 701 A 1 HETATM 6 C C11 4DN . . . B 2 24.468 -42.661 36.578 1 37.91 ? C11 4DN 701 A 1 HETATM 7 C C9 4DN . . . B 2 24.764 -43.563 37.611 1 38.87 ? C9 4DN 701 A 1 HETATM 8 C C8 4DN . . . B 2 23.945 -43.694 38.735 1 37.85 ? C8 4DN 701 A 1 HETATM 9 C C7 4DN . . . B 2 22.811 -42.907 38.843 1 38.47 ? C7 4DN 701 A 1 HETATM 10 C C5 4DN . . . B 2 21.777 -42.865 39.966 1 41.93 ? C5 4DN 701 A 1 HETATM 11 N N4 4DN . . . B 2 20.63 -42.178 39.363 1 42.71 ? N4 4DN 701 A 1 HETATM 12 N N12 4DN . . . B 2 25.332 -42.587 35.497 1 34.28 ? N12 4DN 701 A 1 HETATM 13 C C13 4DN . . . B 2 25.097 -42.026 34.261 1 35.35 ? C13 4DN 701 A 1 HETATM 14 N N17 4DN . . . B 2 23.947 -41.427 33.949 1 33.77 ? N17 4DN 701 A 1 HETATM 15 C C18 4DN . . . B 2 23.795 -40.907 32.72 1 32.36 ? C18 4DN 701 A 1 HETATM 16 C C16 4DN . . . B 2 24.837 -40.972 31.805 1 28.99 ? C16 4DN 701 A 1 HETATM 17 C C15 4DN . . . B 2 25.989 -41.591 32.217 1 33.79 ? C15 4DN 701 A 1 HETATM 18 N N14 4DN . . . B 2 26.137 -42.118 33.436 1 30.39 ? N14 4DN 701 A 1 HETATM 19 N N19 4DN . . . B 2 22.559 -40.342 32.364 1 35.36 ? N19 4DN 701 A 1 HETATM 20 C C20 4DN . . . B 2 21.433 -40.282 33.294 1 39.38 ? C20 4DN 701 A 1 HETATM 21 C C21 4DN . . . B 2 21.547 -38.98 34.107 1 44.67 ? C21 4DN 701 A 1 HETATM 22 C C32 4DN . . . B 2 20.235 -38.553 34.746 1 49.63 ? C32 4DN 701 A 1 HETATM 23 O O31 4DN . . . B 2 19.873 -37.301 34.187 1 63.48 ? O31 4DN 701 A 1 HETATM 24 C C22 4DN . . . B 2 22.344 -39.72 31.075 1 37.32 ? C22 4DN 701 A 1 HETATM 25 C C30 4DN . . . B 2 21.61 -40.344 30.056 1 38.2 ? C30 4DN 701 A 1 HETATM 26 C C29 4DN . . . B 2 21.417 -39.711 28.816 1 39.59 ? C29 4DN 701 A 1 HETATM 27 C C28 4DN . . . B 2 21.976 -38.454 28.567 1 37.79 ? C28 4DN 701 A 1 HETATM 28 C C27 4DN . . . B 2 22.7 -37.862 29.574 1 38.89 ? C27 4DN 701 A 1 HETATM 29 C C23 4DN . . . B 2 22.904 -38.458 30.81 1 39.79 ? C23 4DN 701 A 1 HETATM 30 N N26 4DN . . . B 2 23.364 -36.671 29.628 1 38.98 ? N26 4DN 701 A 1 HETATM 31 N N25 4DN . . . B 2 23.966 -36.46 30.83 1 38.28 ? N25 4DN 701 A 1 HETATM 32 C C24 4DN . . . B 2 23.704 -37.533 31.551 1 38.07 ? C24 4DN 701 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 363 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #