data_4YMK
#
_model_server_result.job_id            cNe6TQhSyBqzh-CF2zAq-A 
_model_server_result.datetime_utc      '2024-11-12 21:22:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ymk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":401}' 
#
_entry.id    4YMK 
#
_exptl.entry_id    4YMK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4YMK 
_cell.length_a            77.061 
_cell.length_b            113.766 
_cell.length_c            141.698 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4YMK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,K 1 1 
B,G,H,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 94 A HIS 116 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? 
metalc ? metalc2 A NE2 HIS 99 A HIS 121 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc3 A NE2 HIS 131 A HIS 153 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc4 A NE2 HIS 134 A HIS 156 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc5 A NE2 HIS 135 A HIS 157 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? 
metalc ? metalc6 A NE2 HIS 243 A HIS 265 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
metalc ? metalc7 A NE2 HIS 272 A HIS 294 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? 
metalc ? metalc8 A NE2 HIS 275 A HIS 297 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? 
metalc ? metalc9 A NE2 HIS 276 A HIS 298 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc10 D ZN ZN . A ZN 402 1_555 K O HOH . A HOH 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc11 B NE2 HIS 94 D HIS 116 1_555 G ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc12 B NE2 HIS 99 D HIS 121 1_555 G ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
metalc ? metalc13 B NE2 HIS 131 D HIS 153 1_555 G ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc14 B NE2 HIS 134 D HIS 156 1_555 H ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? 
metalc ? metalc15 B NE2 HIS 135 D HIS 157 1_555 G ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc16 B NE2 HIS 243 D HIS 265 1_555 H ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc17 B NE2 HIS 272 D HIS 294 1_555 H ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
metalc ? metalc18 B NE2 HIS 275 D HIS 297 1_555 G ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
metalc ? metalc19 B NE2 HIS 276 D HIS 298 1_555 H ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? 
metalc ? metalc20 H ZN ZN . D ZN 402 1_555 L O HOH . D HOH 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4YMK 
_atom_sites.fract_transf_matrix[1][1]    0.012977 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00879 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007057 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 401 1 ZN ZN . 
D 2 ZN A 1 402 2 ZN ZN . 
E 3 ST9 A 1 403 901 ST9 ST9 . 
F 4 MPG A 1 404 1 MPG MPG . 
G 2 ZN D 1 401 1 ZN ZN . 
H 2 ZN D 1 402 2 ZN ZN . 
I 3 ST9 D 1 403 901 ST9 ST9 . 
J 4 MPG D 1 404 1 MPG MPG . 
K 5 HOH A 1 501 21 HOH HOH . 
K 5 HOH A 2 502 1 HOH HOH . 
K 5 HOH A 3 503 20 HOH HOH . 
K 5 HOH A 4 504 67 HOH HOH . 
K 5 HOH A 5 505 69 HOH HOH . 
K 5 HOH A 6 506 57 HOH HOH . 
K 5 HOH A 7 507 2 HOH HOH . 
K 5 HOH A 8 508 3 HOH HOH . 
K 5 HOH A 9 509 4 HOH HOH . 
K 5 HOH A 10 510 5 HOH HOH . 
K 5 HOH A 11 511 6 HOH HOH . 
K 5 HOH A 12 512 7 HOH HOH . 
K 5 HOH A 13 513 8 HOH HOH . 
K 5 HOH A 14 514 9 HOH HOH . 
K 5 HOH A 15 515 10 HOH HOH . 
K 5 HOH A 16 516 11 HOH HOH . 
K 5 HOH A 17 517 19 HOH HOH . 
K 5 HOH A 18 518 22 HOH HOH . 
K 5 HOH A 19 519 23 HOH HOH . 
K 5 HOH A 20 520 24 HOH HOH . 
K 5 HOH A 21 521 25 HOH HOH . 
K 5 HOH A 22 522 26 HOH HOH . 
K 5 HOH A 23 523 27 HOH HOH . 
K 5 HOH A 24 524 28 HOH HOH . 
K 5 HOH A 25 525 37 HOH HOH . 
K 5 HOH A 26 526 38 HOH HOH . 
K 5 HOH A 27 527 39 HOH HOH . 
K 5 HOH A 28 528 40 HOH HOH . 
K 5 HOH A 29 529 41 HOH HOH . 
K 5 HOH A 30 530 42 HOH HOH . 
K 5 HOH A 31 531 43 HOH HOH . 
K 5 HOH A 32 532 44 HOH HOH . 
K 5 HOH A 33 533 45 HOH HOH . 
K 5 HOH A 34 534 46 HOH HOH . 
K 5 HOH A 35 535 47 HOH HOH . 
K 5 HOH A 36 536 58 HOH HOH . 
K 5 HOH A 37 537 65 HOH HOH . 
K 5 HOH A 38 538 66 HOH HOH . 
K 5 HOH A 39 539 68 HOH HOH . 
K 5 HOH A 40 540 70 HOH HOH . 
K 5 HOH A 41 541 73 HOH HOH . 
K 5 HOH A 42 542 75 HOH HOH . 
K 5 HOH A 43 543 77 HOH HOH . 
K 5 HOH A 44 544 78 HOH HOH . 
K 5 HOH A 45 545 79 HOH HOH . 
K 5 HOH A 46 546 92 HOH HOH . 
K 5 HOH A 47 547 93 HOH HOH . 
L 5 HOH D 1 501 62 HOH HOH . 
L 5 HOH D 2 502 49 HOH HOH . 
L 5 HOH D 3 503 12 HOH HOH . 
L 5 HOH D 4 504 13 HOH HOH . 
L 5 HOH D 5 505 14 HOH HOH . 
L 5 HOH D 6 506 15 HOH HOH . 
L 5 HOH D 7 507 16 HOH HOH . 
L 5 HOH D 8 508 17 HOH HOH . 
L 5 HOH D 9 509 18 HOH HOH . 
L 5 HOH D 10 510 30 HOH HOH . 
L 5 HOH D 11 511 31 HOH HOH . 
L 5 HOH D 12 512 32 HOH HOH . 
L 5 HOH D 13 513 34 HOH HOH . 
L 5 HOH D 14 514 36 HOH HOH . 
L 5 HOH D 15 515 48 HOH HOH . 
L 5 HOH D 16 516 50 HOH HOH . 
L 5 HOH D 17 517 51 HOH HOH . 
L 5 HOH D 18 518 52 HOH HOH . 
L 5 HOH D 19 519 53 HOH HOH . 
L 5 HOH D 20 520 54 HOH HOH . 
L 5 HOH D 21 521 55 HOH HOH . 
L 5 HOH D 22 522 59 HOH HOH . 
L 5 HOH D 23 523 60 HOH HOH . 
L 5 HOH D 24 524 61 HOH HOH . 
L 5 HOH D 25 525 63 HOH HOH . 
L 5 HOH D 26 526 64 HOH HOH . 
L 5 HOH D 27 527 71 HOH HOH . 
L 5 HOH D 28 528 72 HOH HOH . 
L 5 HOH D 29 529 74 HOH HOH . 
L 5 HOH D 30 530 76 HOH HOH . 
L 5 HOH D 31 531 80 HOH HOH . 
L 5 HOH D 32 532 81 HOH HOH . 
L 5 HOH D 33 533 82 HOH HOH . 
L 5 HOH D 34 534 87 HOH HOH . 
L 5 HOH D 35 535 88 HOH HOH . 
L 5 HOH D 36 536 89 HOH HOH . 
L 5 HOH D 37 537 90 HOH HOH . 
L 5 HOH D 38 538 91 HOH HOH . 
L 5 HOH D 39 539 94 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               4.443 
_atom_site.Cartn_y               17.852 
_atom_site.Cartn_z               4.383 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        38.37 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          D 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#