data_4YNE # _model_server_result.job_id w-pCm-XJm76XbfEWGKvnbA _model_server_result.datetime_utc '2024-11-28 09:48:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yne # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 4YNE # _exptl.entry_id 4YNE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 359.4 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[(2R)-2-(3-fluorophenyl)pyrrolidin-1-yl]-3-(pyridin-2-yl)imidazo[1,2-b]pyridazine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4YNE _cell.length_a 105.747 _cell.length_b 105.747 _cell.length_c 204.684 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YNE _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H18 F N5' _chem_comp.formula_weight 359.4 _chem_comp.id 4EK _chem_comp.mon_nstd_flag . _chem_comp.name 6-[(2R)-2-(3-fluorophenyl)pyrrolidin-1-yl]-3-(pyridin-2-yl)imidazo[1,2-b]pyridazine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C11 4EK sing 1 n n C10 C9 4EK sing 2 n n C11 N12 4EK sing 3 n n C9 C8 4EK sing 4 n n F1 C2 4EK sing 5 n n C7 C2 4EK doub 6 n y C7 C6 4EK sing 7 n y C2 C3 4EK sing 8 n y N12 C8 4EK sing 9 n n N12 C13 4EK sing 10 n n C8 C6 4EK sing 11 n n C6 C5 4EK doub 12 n y C3 C4 4EK doub 13 n y C18 C13 4EK sing 14 n y C18 C17 4EK doub 15 n y C5 C4 4EK sing 16 n y C13 N14 4EK doub 17 n y C17 C16 4EK sing 18 n y N14 N15 4EK sing 19 n y C16 N15 4EK sing 20 n y C16 N19 4EK doub 21 n y N15 C21 4EK sing 22 n y C23 C24 4EK doub 23 n y C23 C22 4EK sing 24 n y N19 C20 4EK sing 25 n y C21 C22 4EK sing 26 n n C21 C20 4EK doub 27 n y C24 C25 4EK sing 28 n y C22 N27 4EK doub 29 n y C25 C26 4EK doub 30 n y N27 C26 4EK sing 31 n y C3 H1 4EK sing 32 n n C11 H2 4EK sing 33 n n C11 H3 4EK sing 34 n n C17 H4 4EK sing 35 n n C18 H5 4EK sing 36 n n C20 H6 4EK sing 37 n n C23 H7 4EK sing 38 n n C24 H8 4EK sing 39 n n C25 H9 4EK sing 40 n n C26 H10 4EK sing 41 n n C4 H11 4EK sing 42 n n C5 H12 4EK sing 43 n n C7 H13 4EK sing 44 n n C8 H14 4EK sing 45 n n C9 H15 4EK sing 46 n n C9 H16 4EK sing 47 n n C10 H17 4EK sing 48 n n C10 H18 4EK sing 49 n n # _atom_sites.entry_id 4YNE _atom_sites.fract_transf_matrix[1][1] 0.009457 _atom_sites.fract_transf_matrix[1][2] 0.00546 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010919 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004886 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4EK A 1 801 1 4EK LI1 . C 3 SO4 A 1 802 1 SO4 SO4 . D 3 SO4 A 1 803 2 SO4 SO4 . E 3 SO4 A 1 804 3 SO4 SO4 . F 3 SO4 A 1 805 4 SO4 SO4 . G 3 SO4 A 1 806 5 SO4 SO4 . H 4 GOL A 1 807 1 GOL GOL . I 5 HOH A 1 901 21 HOH HOH . I 5 HOH A 2 902 11 HOH HOH . I 5 HOH A 3 903 25 HOH HOH . I 5 HOH A 4 904 14 HOH HOH . I 5 HOH A 5 905 68 HOH HOH . I 5 HOH A 6 906 69 HOH HOH . I 5 HOH A 7 907 44 HOH HOH . I 5 HOH A 8 908 63 HOH HOH . I 5 HOH A 9 909 64 HOH HOH . I 5 HOH A 10 910 57 HOH HOH . I 5 HOH A 11 911 1 HOH HOH . I 5 HOH A 12 912 2 HOH HOH . I 5 HOH A 13 913 3 HOH HOH . I 5 HOH A 14 914 4 HOH HOH . I 5 HOH A 15 915 5 HOH HOH . I 5 HOH A 16 916 6 HOH HOH . I 5 HOH A 17 917 7 HOH HOH . I 5 HOH A 18 918 8 HOH HOH . I 5 HOH A 19 919 9 HOH HOH . I 5 HOH A 20 920 10 HOH HOH . I 5 HOH A 21 921 12 HOH HOH . I 5 HOH A 22 922 13 HOH HOH . I 5 HOH A 23 923 15 HOH HOH . I 5 HOH A 24 924 16 HOH HOH . I 5 HOH A 25 925 17 HOH HOH . I 5 HOH A 26 926 18 HOH HOH . I 5 HOH A 27 927 19 HOH HOH . I 5 HOH A 28 928 20 HOH HOH . I 5 HOH A 29 929 22 HOH HOH . I 5 HOH A 30 930 23 HOH HOH . I 5 HOH A 31 931 24 HOH HOH . I 5 HOH A 32 932 26 HOH HOH . I 5 HOH A 33 933 27 HOH HOH . I 5 HOH A 34 934 28 HOH HOH . I 5 HOH A 35 935 29 HOH HOH . I 5 HOH A 36 936 30 HOH HOH . I 5 HOH A 37 937 31 HOH HOH . I 5 HOH A 38 938 32 HOH HOH . I 5 HOH A 39 939 33 HOH HOH . I 5 HOH A 40 940 34 HOH HOH . I 5 HOH A 41 941 35 HOH HOH . I 5 HOH A 42 942 36 HOH HOH . I 5 HOH A 43 943 37 HOH HOH . I 5 HOH A 44 944 38 HOH HOH . I 5 HOH A 45 945 39 HOH HOH . I 5 HOH A 46 946 40 HOH HOH . I 5 HOH A 47 947 41 HOH HOH . I 5 HOH A 48 948 42 HOH HOH . I 5 HOH A 49 949 43 HOH HOH . I 5 HOH A 50 950 45 HOH HOH . I 5 HOH A 51 951 46 HOH HOH . I 5 HOH A 52 952 47 HOH HOH . I 5 HOH A 53 953 48 HOH HOH . I 5 HOH A 54 954 49 HOH HOH . I 5 HOH A 55 955 50 HOH HOH . I 5 HOH A 56 956 51 HOH HOH . I 5 HOH A 57 957 52 HOH HOH . I 5 HOH A 58 958 53 HOH HOH . I 5 HOH A 59 959 54 HOH HOH . I 5 HOH A 60 960 55 HOH HOH . I 5 HOH A 61 961 56 HOH HOH . I 5 HOH A 62 962 58 HOH HOH . I 5 HOH A 63 963 59 HOH HOH . I 5 HOH A 64 964 60 HOH HOH . I 5 HOH A 65 965 61 HOH HOH . I 5 HOH A 66 966 62 HOH HOH . I 5 HOH A 67 967 65 HOH HOH . I 5 HOH A 68 968 66 HOH HOH . I 5 HOH A 69 969 67 HOH HOH . I 5 HOH A 70 970 70 HOH HOH . I 5 HOH A 71 971 71 HOH HOH . I 5 HOH A 72 972 72 HOH HOH . I 5 HOH A 73 973 73 HOH HOH . I 5 HOH A 74 974 74 HOH HOH . I 5 HOH A 75 975 75 HOH HOH . I 5 HOH A 76 976 76 HOH HOH . I 5 HOH A 77 977 77 HOH HOH . I 5 HOH A 78 978 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 4EK . . . B 2 -19.998 -44.326 -16.131 1 42.42 ? C2 4EK 801 A 1 HETATM 2 C C3 4EK . . . B 2 -20.438 -45.383 -15.324 1 47.25 ? C3 4EK 801 A 1 HETATM 3 C C11 4EK . . . B 2 -15.279 -42.647 -17.04 1 44.06 ? C11 4EK 801 A 1 HETATM 4 C C13 4EK . . . B 2 -16.025 -42.176 -14.756 1 44.72 ? C13 4EK 801 A 1 HETATM 5 C C16 4EK . . . B 2 -16.325 -40.472 -12.602 1 46.14 ? C16 4EK 801 A 1 HETATM 6 C C17 4EK . . . B 2 -15.804 -39.899 -13.841 1 42.3 ? C17 4EK 801 A 1 HETATM 7 C C18 4EK . . . B 2 -15.672 -40.73 -14.899 1 42.67 ? C18 4EK 801 A 1 HETATM 8 C C20 4EK . . . B 2 -17.051 -40.872 -10.578 1 42.15 ? C20 4EK 801 A 1 HETATM 9 C C21 4EK . . . B 2 -17.068 -41.998 -11.33 1 43.17 ? C21 4EK 801 A 1 HETATM 10 C C22 4EK . . . B 2 -17.562 -43.328 -10.775 1 47.23 ? C22 4EK 801 A 1 HETATM 11 C C23 4EK . . . B 2 -17.668 -44.491 -11.556 1 50.34 ? C23 4EK 801 A 1 HETATM 12 C C24 4EK . . . B 2 -18.147 -45.683 -10.986 1 50.03 ? C24 4EK 801 A 1 HETATM 13 C C25 4EK . . . B 2 -18.528 -45.697 -9.631 1 50.56 ? C25 4EK 801 A 1 HETATM 14 C C26 4EK . . . B 2 -18.415 -44.511 -8.892 1 51.26 ? C26 4EK 801 A 1 HETATM 15 F F1 4EK . . . B 2 -20.892 -43.611 -16.79 1 41.83 ? F1 4EK 801 A 1 HETATM 16 C C4 4EK . . . B 2 -19.498 -46.148 -14.632 1 46.55 ? C4 4EK 801 A 1 HETATM 17 C C5 4EK . . . B 2 -18.135 -45.838 -14.757 1 45.38 ? C5 4EK 801 A 1 HETATM 18 C C6 4EK . . . B 2 -17.697 -44.774 -15.553 1 38.69 ? C6 4EK 801 A 1 HETATM 19 C C7 4EK . . . B 2 -18.638 -44.004 -16.228 1 36.66 ? C7 4EK 801 A 1 HETATM 20 C C8 4EK . . . B 2 -16.191 -44.451 -15.638 1 42.97 ? C8 4EK 801 A 1 HETATM 21 C C9 4EK . . . B 2 -15.515 -45.085 -16.9 1 41.56 ? C9 4EK 801 A 1 HETATM 22 C C10 4EK . . . B 2 -15.398 -43.926 -17.901 1 47.43 ? C10 4EK 801 A 1 HETATM 23 N N12 4EK . . . B 2 -15.86 -43.026 -15.749 1 44.35 ? N12 4EK 801 A 1 HETATM 24 N N14 4EK . . . B 2 -16.463 -42.559 -13.603 1 42.08 ? N14 4EK 801 A 1 HETATM 25 N N15 4EK . . . B 2 -16.63 -41.733 -12.549 1 42.42 ? N15 4EK 801 A 1 HETATM 26 N N19 4EK . . . B 2 -16.541 -39.895 -11.502 1 42.63 ? N19 4EK 801 A 1 HETATM 27 N N27 4EK . . . B 2 -17.951 -43.375 -9.472 1 46.78 ? N27 4EK 801 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #