data_4YNX # _model_server_result.job_id FzKp_QBcKdaVXi1sy2sw8A _model_server_result.datetime_utc '2025-06-20 17:21:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ynx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 4YNX # _exptl.entry_id 4YNX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4YNX _cell.length_a 36.736 _cell.length_b 38.189 _cell.length_c 54.728 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YNX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 254 n n S O2 SO4 doub 255 n n S O3 SO4 sing 256 n n S O4 SO4 sing 257 n n # _atom_sites.entry_id 4YNX _atom_sites.fract_transf_matrix[1][1] 0.027221 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026186 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018272 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 101 2 SO4 SO4 . D 2 SO4 B 1 101 1 SO4 SO4 . E 3 HOH A 1 201 18 HOH HOH . E 3 HOH A 2 202 69 HOH HOH . E 3 HOH A 3 203 82 HOH HOH . E 3 HOH A 4 204 45 HOH HOH . E 3 HOH A 5 205 70 HOH HOH . E 3 HOH A 6 206 5 HOH HOH . E 3 HOH A 7 207 8 HOH HOH . E 3 HOH A 8 208 15 HOH HOH . E 3 HOH A 9 209 1 HOH HOH . E 3 HOH A 10 210 77 HOH HOH . E 3 HOH A 11 211 61 HOH HOH . E 3 HOH A 12 212 39 HOH HOH . E 3 HOH A 13 213 22 HOH HOH . E 3 HOH A 14 214 66 HOH HOH . E 3 HOH A 15 215 21 HOH HOH . E 3 HOH A 16 216 74 HOH HOH . E 3 HOH A 17 217 57 HOH HOH . E 3 HOH A 18 218 41 HOH HOH . E 3 HOH A 19 219 81 HOH HOH . E 3 HOH A 20 220 28 HOH HOH . E 3 HOH A 21 221 2 HOH HOH . E 3 HOH A 22 222 79 HOH HOH . E 3 HOH A 23 223 25 HOH HOH . E 3 HOH A 24 224 43 HOH HOH . E 3 HOH A 25 225 36 HOH HOH . E 3 HOH A 26 226 80 HOH HOH . F 3 HOH B 1 201 32 HOH HOH . F 3 HOH B 2 202 44 HOH HOH . F 3 HOH B 3 203 19 HOH HOH . F 3 HOH B 4 204 35 HOH HOH . F 3 HOH B 5 205 6 HOH HOH . F 3 HOH B 6 206 26 HOH HOH . F 3 HOH B 7 207 56 HOH HOH . F 3 HOH B 8 208 65 HOH HOH . F 3 HOH B 9 209 31 HOH HOH . F 3 HOH B 10 210 30 HOH HOH . F 3 HOH B 11 211 59 HOH HOH . F 3 HOH B 12 212 12 HOH HOH . F 3 HOH B 13 213 37 HOH HOH . F 3 HOH B 14 214 62 HOH HOH . F 3 HOH B 15 215 76 HOH HOH . F 3 HOH B 16 216 75 HOH HOH . F 3 HOH B 17 217 20 HOH HOH . F 3 HOH B 18 218 48 HOH HOH . F 3 HOH B 19 219 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 10.755 6.108 35.69 1 10.95 ? S SO4 101 B 1 HETATM 2 O O1 SO4 . . . D 2 11.392 4.997 35.047 1 14.44 ? O1 SO4 101 B 1 HETATM 3 O O2 SO4 . . . D 2 9.547 6.477 34.996 1 13.61 ? O2 SO4 101 B 1 HETATM 4 O O3 SO4 . . . D 2 10.646 5.894 37.134 1 14.05 ? O3 SO4 101 B 1 HETATM 5 O O4 SO4 . . . D 2 11.61 7.301 35.624 1 14.65 ? O4 SO4 101 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 446 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #