data_4YOO # _model_server_result.job_id z-vqlGKVYhaJtohxK7v13A _model_server_result.datetime_utc '2024-11-22 05:54:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yoo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 4YOO # _exptl.entry_id 4YOO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4YOO _cell.length_a 74.815 _cell.length_b 100.53 _cell.length_c 142.79 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YOO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ALA 13 X ALA 12 1_555 B N SEP 14 X SEP 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale2 B C SEP 14 X SEP 13 1_555 B N ALA 15 X ALA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 308 n n S O2 SO4 doub 309 n n S O3 SO4 sing 310 n n S O4 SO4 sing 311 n n # _atom_sites.entry_id 4YOO _atom_sites.fract_transf_matrix[1][1] 0.013366 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009947 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007003 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 1001 1 SO4 SO4 . D 3 SO4 A 1 1002 2 SO4 SO4 . E 3 SO4 A 1 1003 3 SO4 SO4 . F 3 SO4 A 1 1004 4 SO4 SO4 . G 4 HOH A 1 1101 63 HOH HOH . G 4 HOH A 2 1102 2 HOH HOH . G 4 HOH A 3 1103 132 HOH HOH . G 4 HOH A 4 1104 81 HOH HOH . G 4 HOH A 5 1105 70 HOH HOH . G 4 HOH A 6 1106 46 HOH HOH . G 4 HOH A 7 1107 43 HOH HOH . G 4 HOH A 8 1108 20 HOH HOH . G 4 HOH A 9 1109 41 HOH HOH . G 4 HOH A 10 1110 35 HOH HOH . G 4 HOH A 11 1111 1 HOH HOH . G 4 HOH A 12 1112 105 HOH HOH . G 4 HOH A 13 1113 22 HOH HOH . G 4 HOH A 14 1114 68 HOH HOH . G 4 HOH A 15 1115 11 HOH HOH . G 4 HOH A 16 1116 51 HOH HOH . G 4 HOH A 17 1117 21 HOH HOH . G 4 HOH A 18 1118 31 HOH HOH . G 4 HOH A 19 1119 4 HOH HOH . G 4 HOH A 20 1120 17 HOH HOH . G 4 HOH A 21 1121 72 HOH HOH . G 4 HOH A 22 1122 122 HOH HOH . G 4 HOH A 23 1123 77 HOH HOH . G 4 HOH A 24 1124 90 HOH HOH . G 4 HOH A 25 1125 27 HOH HOH . G 4 HOH A 26 1126 24 HOH HOH . G 4 HOH A 27 1127 38 HOH HOH . G 4 HOH A 28 1128 14 HOH HOH . G 4 HOH A 29 1129 133 HOH HOH . G 4 HOH A 30 1130 59 HOH HOH . G 4 HOH A 31 1131 9 HOH HOH . G 4 HOH A 32 1132 60 HOH HOH . G 4 HOH A 33 1133 69 HOH HOH . G 4 HOH A 34 1134 98 HOH HOH . G 4 HOH A 35 1135 3 HOH HOH . G 4 HOH A 36 1136 62 HOH HOH . G 4 HOH A 37 1137 97 HOH HOH . G 4 HOH A 38 1138 19 HOH HOH . G 4 HOH A 39 1139 39 HOH HOH . G 4 HOH A 40 1140 30 HOH HOH . G 4 HOH A 41 1141 5 HOH HOH . G 4 HOH A 42 1142 87 HOH HOH . G 4 HOH A 43 1143 93 HOH HOH . G 4 HOH A 44 1144 37 HOH HOH . G 4 HOH A 45 1145 56 HOH HOH . G 4 HOH A 46 1146 13 HOH HOH . G 4 HOH A 47 1147 16 HOH HOH . G 4 HOH A 48 1148 58 HOH HOH . G 4 HOH A 49 1149 76 HOH HOH . G 4 HOH A 50 1150 83 HOH HOH . G 4 HOH A 51 1151 135 HOH HOH . G 4 HOH A 52 1152 91 HOH HOH . G 4 HOH A 53 1153 26 HOH HOH . G 4 HOH A 54 1154 6 HOH HOH . G 4 HOH A 55 1155 88 HOH HOH . G 4 HOH A 56 1156 53 HOH HOH . G 4 HOH A 57 1157 34 HOH HOH . G 4 HOH A 58 1158 10 HOH HOH . G 4 HOH A 59 1159 25 HOH HOH . G 4 HOH A 60 1160 102 HOH HOH . G 4 HOH A 61 1161 29 HOH HOH . G 4 HOH A 62 1162 99 HOH HOH . G 4 HOH A 63 1163 54 HOH HOH . G 4 HOH A 64 1164 104 HOH HOH . G 4 HOH A 65 1165 33 HOH HOH . G 4 HOH A 66 1166 8 HOH HOH . G 4 HOH A 67 1167 92 HOH HOH . G 4 HOH A 68 1168 85 HOH HOH . G 4 HOH A 69 1169 134 HOH HOH . G 4 HOH A 70 1170 126 HOH HOH . G 4 HOH A 71 1171 116 HOH HOH . G 4 HOH A 72 1172 28 HOH HOH . G 4 HOH A 73 1173 36 HOH HOH . G 4 HOH A 74 1174 7 HOH HOH . G 4 HOH A 75 1175 32 HOH HOH . G 4 HOH A 76 1176 50 HOH HOH . G 4 HOH A 77 1177 65 HOH HOH . G 4 HOH A 78 1178 101 HOH HOH . G 4 HOH A 79 1179 106 HOH HOH . G 4 HOH A 80 1180 82 HOH HOH . G 4 HOH A 81 1181 40 HOH HOH . G 4 HOH A 82 1182 61 HOH HOH . G 4 HOH A 83 1183 79 HOH HOH . G 4 HOH A 84 1184 45 HOH HOH . G 4 HOH A 85 1185 100 HOH HOH . G 4 HOH A 86 1186 47 HOH HOH . G 4 HOH A 87 1187 44 HOH HOH . G 4 HOH A 88 1188 55 HOH HOH . G 4 HOH A 89 1189 119 HOH HOH . G 4 HOH A 90 1190 15 HOH HOH . G 4 HOH A 91 1191 18 HOH HOH . G 4 HOH A 92 1192 57 HOH HOH . G 4 HOH A 93 1193 89 HOH HOH . G 4 HOH A 94 1194 115 HOH HOH . G 4 HOH A 95 1195 48 HOH HOH . G 4 HOH A 96 1196 49 HOH HOH . G 4 HOH A 97 1197 113 HOH HOH . G 4 HOH A 98 1198 128 HOH HOH . G 4 HOH A 99 1199 86 HOH HOH . G 4 HOH A 100 1200 66 HOH HOH . G 4 HOH A 101 1201 123 HOH HOH . G 4 HOH A 102 1202 108 HOH HOH . G 4 HOH A 103 1203 23 HOH HOH . G 4 HOH A 104 1204 78 HOH HOH . G 4 HOH A 105 1205 64 HOH HOH . G 4 HOH A 106 1206 12 HOH HOH . G 4 HOH A 107 1207 52 HOH HOH . G 4 HOH A 108 1208 84 HOH HOH . G 4 HOH A 109 1209 121 HOH HOH . G 4 HOH A 110 1210 107 HOH HOH . G 4 HOH A 111 1211 74 HOH HOH . G 4 HOH A 112 1212 94 HOH HOH . G 4 HOH A 113 1213 73 HOH HOH . G 4 HOH A 114 1214 71 HOH HOH . G 4 HOH A 115 1215 131 HOH HOH . G 4 HOH A 116 1216 110 HOH HOH . G 4 HOH A 117 1217 103 HOH HOH . G 4 HOH A 118 1218 95 HOH HOH . G 4 HOH A 119 1219 112 HOH HOH . G 4 HOH A 120 1220 67 HOH HOH . G 4 HOH A 121 1221 80 HOH HOH . G 4 HOH A 122 1222 124 HOH HOH . G 4 HOH A 123 1223 42 HOH HOH . G 4 HOH A 124 1224 96 HOH HOH . G 4 HOH A 125 1225 75 HOH HOH . G 4 HOH A 126 1226 125 HOH HOH . G 4 HOH A 127 1227 129 HOH HOH . H 4 HOH X 1 101 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 14.591 125.335 -5.621 1 39.55 ? S SO4 1001 A 1 HETATM 2 O O1 SO4 . . . C 3 15.649 125.432 -6.625 1 37.97 ? O1 SO4 1001 A 1 HETATM 3 O O2 SO4 . . . C 3 13.338 125.799 -6.209 1 38.31 ? O2 SO4 1001 A 1 HETATM 4 O O3 SO4 . . . C 3 14.433 123.952 -5.179 1 40.21 ? O3 SO4 1001 A 1 HETATM 5 O O4 SO4 . . . C 3 14.941 126.164 -4.47 1 31.16 ? O4 SO4 1001 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #