data_4YP8
#
_model_server_result.job_id            -f6-tjMySAsXM8KljcGKhA 
_model_server_result.datetime_utc      '2024-12-27 08:40:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4yp8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    4YP8 
#
_exptl.entry_id    4YP8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              487.572 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-{1-(4-cyclopropyl-2-fluorophenyl)-3-[1-(propan-2-yl)piperidin-4-yl]-1H-pyrazol-5-yl}pyrazolo[1,5-a]pyrimidine-3-carboxamide 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          124.72 
_cell.angle_gamma         90 
_cell.entry_id            4YP8 
_cell.length_a            144.01 
_cell.length_b            138.19 
_cell.length_c            88.08 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4YP8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,I 1 1 
B,F,J 2 1 
C,G,K 3 1 
D,H,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C TPO 183 A TPO 342 1_555 A N VAL 184 A VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
covale ? covale2 A C MET 185 A MET 344 1_555 A N TPO 186 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale3 A C TPO 186 A TPO 345 1_555 A N SEP 187 A SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale4 A C SEP 187 A SEP 346 1_555 A N ARG 188 A ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
covale ? covale5 B C GLN 182 B GLN 341 1_555 B N TPO 183 B TPO 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale6 B C TPO 183 B TPO 342 1_555 B N VAL 184 B VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
covale ? covale7 B C MET 185 B MET 344 1_555 B N TPO 186 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale8 B C TPO 186 B TPO 345 1_555 B N SEP 187 B SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale9 B C SEP 187 B SEP 346 1_555 B N ARG 188 B ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? 
covale ? covale10 C C TPO 183 C TPO 342 1_555 C N VAL 184 C VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? 
covale ? covale11 C C MET 185 C MET 344 1_555 C N TPO 186 C TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale12 C C TPO 186 C TPO 345 1_555 C N SEP 187 C SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale13 C C SEP 187 C SEP 346 1_555 C N ARG 188 C ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? 
covale ? covale14 D C TPO 183 D TPO 342 1_555 D N VAL 184 D VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? 
covale ? covale15 D C MET 185 D MET 344 1_555 D N TPO 186 D TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale16 D C TPO 186 D TPO 345 1_555 D N SEP 187 D SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale17 D C SEP 187 D SEP 346 1_555 D N ARG 188 D ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
#
_chem_comp.formula           'C27 H30 F N7 O' 
_chem_comp.formula_weight    487.572 
_chem_comp.id                4GF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-{1-(4-cyclopropyl-2-fluorophenyl)-3-[1-(propan-2-yl)piperidin-4-yl]-1H-pyrazol-5-yl}pyrazolo[1,5-a]pyrimidine-3-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 C11 4GF doub 1 n y 
C12 N07 4GF sing 2 n y 
C11 C10 4GF sing 3 n y 
N07 N06 4GF sing 4 n y 
N07 C08 4GF sing 5 n y 
N06 C05 4GF doub 6 n y 
C10 N09 4GF doub 7 n y 
C05 C04 4GF sing 8 n y 
C08 N09 4GF sing 9 n y 
C08 C04 4GF doub 10 n y 
C04 C02 4GF sing 11 n n 
C02 O03 4GF doub 12 n n 
C02 N01 4GF sing 13 n n 
C34 C30 4GF sing 14 n n 
C34 C35 4GF sing 15 n n 
C34 C36 4GF sing 16 n n 
C31 C30 4GF doub 17 n y 
C31 C32 4GF sing 18 n y 
N01 C13 4GF sing 19 n n 
C30 C29 4GF sing 20 n y 
C35 C36 4GF sing 21 n n 
C32 C27 4GF doub 22 n y 
C29 C28 4GF doub 23 n y 
C13 N17 4GF sing 24 n y 
C13 C14 4GF doub 25 n y 
C27 C28 4GF sing 26 n y 
C27 N17 4GF sing 27 n n 
C28 F33 4GF sing 28 n n 
N17 N16 4GF sing 29 n y 
C14 C15 4GF sing 30 n y 
N16 C15 4GF doub 31 n y 
C15 C18 4GF sing 32 n n 
C18 C19 4GF sing 33 n n 
C18 C23 4GF sing 34 n n 
C19 C20 4GF sing 35 n n 
C23 C22 4GF sing 36 n n 
C20 N21 4GF sing 37 n n 
C22 N21 4GF sing 38 n n 
N21 C24 4GF sing 39 n n 
C24 C26 4GF sing 40 n n 
C24 C25 4GF sing 41 n n 
N01 H1 4GF sing 42 n n 
C05 H2 4GF sing 43 n n 
C10 H3 4GF sing 44 n n 
C11 H4 4GF sing 45 n n 
C12 H5 4GF sing 46 n n 
C14 H6 4GF sing 47 n n 
C18 H7 4GF sing 48 n n 
C19 H8 4GF sing 49 n n 
C19 H9 4GF sing 50 n n 
C20 H10 4GF sing 51 n n 
C20 H11 4GF sing 52 n n 
C22 H13 4GF sing 53 n n 
C22 H14 4GF sing 54 n n 
C23 H15 4GF sing 55 n n 
C23 H16 4GF sing 56 n n 
C24 H17 4GF sing 57 n n 
C25 H18 4GF sing 58 n n 
C25 H19 4GF sing 59 n n 
C25 H20 4GF sing 60 n n 
C26 H21 4GF sing 61 n n 
C26 H22 4GF sing 62 n n 
C26 H23 4GF sing 63 n n 
C29 H24 4GF sing 64 n n 
C31 H25 4GF sing 65 n n 
C32 H26 4GF sing 66 n n 
C34 H27 4GF sing 67 n n 
C35 H28 4GF sing 68 n n 
C35 H29 4GF sing 69 n n 
C36 H30 4GF sing 70 n n 
C36 H31 4GF sing 71 n n 
#
_atom_sites.entry_id                     4YP8 
_atom_sites.fract_transf_matrix[1][1]    0.006944 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004812 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007236 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013813 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 4GF A 1 501 1 4GF SCH . 
F 2 4GF B 1 501 2 4GF SCH . 
G 2 4GF C 1 501 3 4GF SCH . 
H 2 4GF D 1 501 4 4GF SCH . 
I 3 HOH A 1 601 11 HOH WAT . 
I 3 HOH A 2 602 12 HOH WAT . 
I 3 HOH A 3 603 13 HOH WAT . 
I 3 HOH A 4 604 28 HOH WAT . 
I 3 HOH A 5 605 35 HOH WAT . 
I 3 HOH A 6 606 37 HOH WAT . 
I 3 HOH A 7 607 42 HOH WAT . 
I 3 HOH A 8 608 46 HOH WAT . 
I 3 HOH A 9 609 53 HOH WAT . 
I 3 HOH A 10 610 63 HOH WAT . 
J 3 HOH B 1 601 1 HOH WAT . 
J 3 HOH B 2 602 4 HOH WAT . 
J 3 HOH B 3 603 7 HOH WAT . 
J 3 HOH B 4 604 16 HOH WAT . 
J 3 HOH B 5 605 33 HOH WAT . 
J 3 HOH B 6 606 39 HOH WAT . 
J 3 HOH B 7 607 43 HOH WAT . 
J 3 HOH B 8 608 51 HOH WAT . 
J 3 HOH B 9 609 54 HOH WAT . 
J 3 HOH B 10 610 55 HOH WAT . 
J 3 HOH B 11 611 58 HOH WAT . 
J 3 HOH B 12 612 60 HOH WAT . 
K 3 HOH C 1 601 27 HOH WAT . 
K 3 HOH C 2 602 5 HOH WAT . 
K 3 HOH C 3 603 8 HOH WAT . 
K 3 HOH C 4 604 10 HOH WAT . 
K 3 HOH C 5 605 14 HOH WAT . 
K 3 HOH C 6 606 17 HOH WAT . 
K 3 HOH C 7 607 19 HOH WAT . 
K 3 HOH C 8 608 23 HOH WAT . 
K 3 HOH C 9 609 24 HOH WAT . 
K 3 HOH C 10 610 25 HOH WAT . 
K 3 HOH C 11 611 26 HOH WAT . 
K 3 HOH C 12 612 30 HOH WAT . 
K 3 HOH C 13 613 32 HOH WAT . 
K 3 HOH C 14 614 34 HOH WAT . 
K 3 HOH C 15 615 38 HOH WAT . 
K 3 HOH C 16 616 40 HOH WAT . 
K 3 HOH C 17 617 44 HOH WAT . 
K 3 HOH C 18 618 45 HOH WAT . 
K 3 HOH C 19 619 48 HOH WAT . 
K 3 HOH C 20 620 50 HOH WAT . 
K 3 HOH C 21 621 56 HOH WAT . 
K 3 HOH C 22 622 57 HOH WAT . 
L 3 HOH D 1 601 2 HOH WAT . 
L 3 HOH D 2 602 3 HOH WAT . 
L 3 HOH D 3 603 6 HOH WAT . 
L 3 HOH D 4 604 9 HOH WAT . 
L 3 HOH D 5 605 15 HOH WAT . 
L 3 HOH D 6 606 18 HOH WAT . 
L 3 HOH D 7 607 20 HOH WAT . 
L 3 HOH D 8 608 21 HOH WAT . 
L 3 HOH D 9 609 22 HOH WAT . 
L 3 HOH D 10 610 29 HOH WAT . 
L 3 HOH D 11 611 31 HOH WAT . 
L 3 HOH D 12 612 36 HOH WAT . 
L 3 HOH D 13 613 41 HOH WAT . 
L 3 HOH D 14 614 47 HOH WAT . 
L 3 HOH D 15 615 49 HOH WAT . 
L 3 HOH D 16 616 52 HOH WAT . 
L 3 HOH D 17 617 59 HOH WAT . 
L 3 HOH D 18 618 61 HOH WAT . 
L 3 HOH D 19 619 62 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N01 4GF . . . E 2 29.432 6.231 -7.549 1 60.74 ? N01 4GF 501 A 1 
HETATM 2 C C02 4GF . . . E 2 30.104 5.209 -8.16 1 59.79 ? C02 4GF 501 A 1 
HETATM 3 O O03 4GF . . . E 2 29.979 4.028 -7.839 1 62.3 ? O03 4GF 501 A 1 
HETATM 4 C C04 4GF . . . E 2 31.024 5.615 -9.225 1 58.11 ? C04 4GF 501 A 1 
HETATM 5 C C05 4GF . . . E 2 31.898 4.691 -9.874 1 59.02 ? C05 4GF 501 A 1 
HETATM 6 N N06 4GF . . . E 2 32.71 5.276 -10.772 1 59.8 ? N06 4GF 501 A 1 
HETATM 7 N N07 4GF . . . E 2 32.328 6.603 -10.789 1 58.86 ? N07 4GF 501 A 1 
HETATM 8 C C08 4GF . . . E 2 31.248 6.858 -9.848 1 57.9 ? C08 4GF 501 A 1 
HETATM 9 N N09 4GF . . . E 2 30.758 8.167 -9.669 1 59.06 ? N09 4GF 501 A 1 
HETATM 10 C C10 4GF . . . E 2 31.326 9.142 -10.434 1 58.47 ? C10 4GF 501 A 1 
HETATM 11 C C11 4GF . . . E 2 32.325 8.926 -11.367 1 58.94 ? C11 4GF 501 A 1 
HETATM 12 C C12 4GF . . . E 2 32.876 7.661 -11.559 1 58.11 ? C12 4GF 501 A 1 
HETATM 13 C C13 4GF . . . E 2 28.699 6.168 -6.358 1 65.08 ? C13 4GF 501 A 1 
HETATM 14 C C14 4GF . . . E 2 28.26 5.149 -5.532 1 65.78 ? C14 4GF 501 A 1 
HETATM 15 C C15 4GF . . . E 2 27.521 5.783 -4.482 1 68.99 ? C15 4GF 501 A 1 
HETATM 16 N N16 4GF . . . E 2 27.478 7.138 -4.655 1 67.34 ? N16 4GF 501 A 1 
HETATM 17 N N17 4GF . . . E 2 28.227 7.354 -5.789 1 69.61 ? N17 4GF 501 A 1 
HETATM 18 C C18 4GF . . . E 2 26.785 5.137 -3.349 1 75.63 ? C18 4GF 501 A 1 
HETATM 19 C C19 4GF . . . E 2 27.491 3.905 -2.768 1 76.49 ? C19 4GF 501 A 1 
HETATM 20 C C20 4GF . . . E 2 26.655 3.343 -1.623 1 78.11 ? C20 4GF 501 A 1 
HETATM 21 N N21 4GF . . . E 2 26.492 4.333 -0.546 1 81.62 ? N21 4GF 501 A 1 
HETATM 22 C C22 4GF . . . E 2 25.74 5.473 -1.099 1 83.42 ? C22 4GF 501 A 1 
HETATM 23 C C23 4GF . . . E 2 26.509 6.152 -2.23 1 82.32 ? C23 4GF 501 A 1 
HETATM 24 C C24 4GF . . . E 2 25.897 3.783 0.69 1 84 ? C24 4GF 501 A 1 
HETATM 25 C C25 4GF . . . E 2 25.281 4.86 1.579 1 84.05 ? C25 4GF 501 A 1 
HETATM 26 C C26 4GF . . . E 2 26.884 2.911 1.462 1 85.4 ? C26 4GF 501 A 1 
HETATM 27 C C27 4GF . . . E 2 28.425 8.681 -6.265 1 76.7 ? C27 4GF 501 A 1 
HETATM 28 C C28 4GF . . . E 2 29.665 9.337 -6.188 1 77.62 ? C28 4GF 501 A 1 
HETATM 29 C C29 4GF . . . E 2 29.897 10.575 -6.728 1 76.74 ? C29 4GF 501 A 1 
HETATM 30 C C30 4GF . . . E 2 28.873 11.206 -7.43 1 77.28 ? C30 4GF 501 A 1 
HETATM 31 C C31 4GF . . . E 2 27.645 10.564 -7.552 1 80.72 ? C31 4GF 501 A 1 
HETATM 32 C C32 4GF . . . E 2 27.429 9.304 -7.015 1 80.34 ? C32 4GF 501 A 1 
HETATM 33 F F33 4GF . . . E 2 30.666 8.726 -5.522 1 79.48 ? F33 4GF 501 A 1 
HETATM 34 C C34 4GF . . . E 2 29.084 12.574 -8.05 1 74.4 ? C34 4GF 501 A 1 
HETATM 35 C C35 4GF . . . E 2 29.915 13.635 -7.375 1 74.44 ? C35 4GF 501 A 1 
HETATM 36 C C36 4GF . . . E 2 28.438 13.734 -7.34 1 74.5 ? C36 4GF 501 A 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           232 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           36 
#