data_4YP8 # _model_server_result.job_id hCHiHnhOxwpyvDqF23H80g _model_server_result.datetime_utc '2024-12-27 08:44:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yp8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":501}' # _entry.id 4YP8 # _exptl.entry_id 4YP8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 487.572 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{1-(4-cyclopropyl-2-fluorophenyl)-3-[1-(propan-2-yl)piperidin-4-yl]-1H-pyrazol-5-yl}pyrazolo[1,5-a]pyrimidine-3-carboxamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 124.72 _cell.angle_gamma 90 _cell.entry_id 4YP8 _cell.length_a 144.01 _cell.length_b 138.19 _cell.length_c 88.08 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YP8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I 1 1 B,F,J 2 1 C,G,K 3 1 D,H,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TPO 183 A TPO 342 1_555 A N VAL 184 A VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale2 A C MET 185 A MET 344 1_555 A N TPO 186 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale3 A C TPO 186 A TPO 345 1_555 A N SEP 187 A SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C SEP 187 A SEP 346 1_555 A N ARG 188 A ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale5 B C GLN 182 B GLN 341 1_555 B N TPO 183 B TPO 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale6 B C TPO 183 B TPO 342 1_555 B N VAL 184 B VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale7 B C MET 185 B MET 344 1_555 B N TPO 186 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale8 B C TPO 186 B TPO 345 1_555 B N SEP 187 B SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale9 B C SEP 187 B SEP 346 1_555 B N ARG 188 B ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale10 C C TPO 183 C TPO 342 1_555 C N VAL 184 C VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale11 C C MET 185 C MET 344 1_555 C N TPO 186 C TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale12 C C TPO 186 C TPO 345 1_555 C N SEP 187 C SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale13 C C SEP 187 C SEP 346 1_555 C N ARG 188 C ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale14 D C TPO 183 D TPO 342 1_555 D N VAL 184 D VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale15 D C MET 185 D MET 344 1_555 D N TPO 186 D TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale16 D C TPO 186 D TPO 345 1_555 D N SEP 187 D SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale17 D C SEP 187 D SEP 346 1_555 D N ARG 188 D ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? # _chem_comp.formula 'C27 H30 F N7 O' _chem_comp.formula_weight 487.572 _chem_comp.id 4GF _chem_comp.mon_nstd_flag . _chem_comp.name N-{1-(4-cyclopropyl-2-fluorophenyl)-3-[1-(propan-2-yl)piperidin-4-yl]-1H-pyrazol-5-yl}pyrazolo[1,5-a]pyrimidine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C11 4GF doub 1 n y C12 N07 4GF sing 2 n y C11 C10 4GF sing 3 n y N07 N06 4GF sing 4 n y N07 C08 4GF sing 5 n y N06 C05 4GF doub 6 n y C10 N09 4GF doub 7 n y C05 C04 4GF sing 8 n y C08 N09 4GF sing 9 n y C08 C04 4GF doub 10 n y C04 C02 4GF sing 11 n n C02 O03 4GF doub 12 n n C02 N01 4GF sing 13 n n C34 C30 4GF sing 14 n n C34 C35 4GF sing 15 n n C34 C36 4GF sing 16 n n C31 C30 4GF doub 17 n y C31 C32 4GF sing 18 n y N01 C13 4GF sing 19 n n C30 C29 4GF sing 20 n y C35 C36 4GF sing 21 n n C32 C27 4GF doub 22 n y C29 C28 4GF doub 23 n y C13 N17 4GF sing 24 n y C13 C14 4GF doub 25 n y C27 C28 4GF sing 26 n y C27 N17 4GF sing 27 n n C28 F33 4GF sing 28 n n N17 N16 4GF sing 29 n y C14 C15 4GF sing 30 n y N16 C15 4GF doub 31 n y C15 C18 4GF sing 32 n n C18 C19 4GF sing 33 n n C18 C23 4GF sing 34 n n C19 C20 4GF sing 35 n n C23 C22 4GF sing 36 n n C20 N21 4GF sing 37 n n C22 N21 4GF sing 38 n n N21 C24 4GF sing 39 n n C24 C26 4GF sing 40 n n C24 C25 4GF sing 41 n n N01 H1 4GF sing 42 n n C05 H2 4GF sing 43 n n C10 H3 4GF sing 44 n n C11 H4 4GF sing 45 n n C12 H5 4GF sing 46 n n C14 H6 4GF sing 47 n n C18 H7 4GF sing 48 n n C19 H8 4GF sing 49 n n C19 H9 4GF sing 50 n n C20 H10 4GF sing 51 n n C20 H11 4GF sing 52 n n C22 H13 4GF sing 53 n n C22 H14 4GF sing 54 n n C23 H15 4GF sing 55 n n C23 H16 4GF sing 56 n n C24 H17 4GF sing 57 n n C25 H18 4GF sing 58 n n C25 H19 4GF sing 59 n n C25 H20 4GF sing 60 n n C26 H21 4GF sing 61 n n C26 H22 4GF sing 62 n n C26 H23 4GF sing 63 n n C29 H24 4GF sing 64 n n C31 H25 4GF sing 65 n n C32 H26 4GF sing 66 n n C34 H27 4GF sing 67 n n C35 H28 4GF sing 68 n n C35 H29 4GF sing 69 n n C36 H30 4GF sing 70 n n C36 H31 4GF sing 71 n n # _atom_sites.entry_id 4YP8 _atom_sites.fract_transf_matrix[1][1] 0.006944 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004812 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007236 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013813 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 4GF A 1 501 1 4GF SCH . F 2 4GF B 1 501 2 4GF SCH . G 2 4GF C 1 501 3 4GF SCH . H 2 4GF D 1 501 4 4GF SCH . I 3 HOH A 1 601 11 HOH WAT . I 3 HOH A 2 602 12 HOH WAT . I 3 HOH A 3 603 13 HOH WAT . I 3 HOH A 4 604 28 HOH WAT . I 3 HOH A 5 605 35 HOH WAT . I 3 HOH A 6 606 37 HOH WAT . I 3 HOH A 7 607 42 HOH WAT . I 3 HOH A 8 608 46 HOH WAT . I 3 HOH A 9 609 53 HOH WAT . I 3 HOH A 10 610 63 HOH WAT . J 3 HOH B 1 601 1 HOH WAT . J 3 HOH B 2 602 4 HOH WAT . J 3 HOH B 3 603 7 HOH WAT . J 3 HOH B 4 604 16 HOH WAT . J 3 HOH B 5 605 33 HOH WAT . J 3 HOH B 6 606 39 HOH WAT . J 3 HOH B 7 607 43 HOH WAT . J 3 HOH B 8 608 51 HOH WAT . J 3 HOH B 9 609 54 HOH WAT . J 3 HOH B 10 610 55 HOH WAT . J 3 HOH B 11 611 58 HOH WAT . J 3 HOH B 12 612 60 HOH WAT . K 3 HOH C 1 601 27 HOH WAT . K 3 HOH C 2 602 5 HOH WAT . K 3 HOH C 3 603 8 HOH WAT . K 3 HOH C 4 604 10 HOH WAT . K 3 HOH C 5 605 14 HOH WAT . K 3 HOH C 6 606 17 HOH WAT . K 3 HOH C 7 607 19 HOH WAT . K 3 HOH C 8 608 23 HOH WAT . K 3 HOH C 9 609 24 HOH WAT . K 3 HOH C 10 610 25 HOH WAT . K 3 HOH C 11 611 26 HOH WAT . K 3 HOH C 12 612 30 HOH WAT . K 3 HOH C 13 613 32 HOH WAT . K 3 HOH C 14 614 34 HOH WAT . K 3 HOH C 15 615 38 HOH WAT . K 3 HOH C 16 616 40 HOH WAT . K 3 HOH C 17 617 44 HOH WAT . K 3 HOH C 18 618 45 HOH WAT . K 3 HOH C 19 619 48 HOH WAT . K 3 HOH C 20 620 50 HOH WAT . K 3 HOH C 21 621 56 HOH WAT . K 3 HOH C 22 622 57 HOH WAT . L 3 HOH D 1 601 2 HOH WAT . L 3 HOH D 2 602 3 HOH WAT . L 3 HOH D 3 603 6 HOH WAT . L 3 HOH D 4 604 9 HOH WAT . L 3 HOH D 5 605 15 HOH WAT . L 3 HOH D 6 606 18 HOH WAT . L 3 HOH D 7 607 20 HOH WAT . L 3 HOH D 8 608 21 HOH WAT . L 3 HOH D 9 609 22 HOH WAT . L 3 HOH D 10 610 29 HOH WAT . L 3 HOH D 11 611 31 HOH WAT . L 3 HOH D 12 612 36 HOH WAT . L 3 HOH D 13 613 41 HOH WAT . L 3 HOH D 14 614 47 HOH WAT . L 3 HOH D 15 615 49 HOH WAT . L 3 HOH D 16 616 52 HOH WAT . L 3 HOH D 17 617 59 HOH WAT . L 3 HOH D 18 618 61 HOH WAT . L 3 HOH D 19 619 62 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 4GF . . . H 2 29.13 8.908 30.959 1 59.52 ? N01 4GF 501 D 1 HETATM 2 C C02 4GF . . . H 2 28.402 8 31.693 1 59.16 ? C02 4GF 501 D 1 HETATM 3 O O03 4GF . . . H 2 28.459 6.78 31.509 1 59.89 ? O03 4GF 501 D 1 HETATM 4 C C04 4GF . . . H 2 27.55 8.573 32.774 1 55.05 ? C04 4GF 501 D 1 HETATM 5 C C05 4GF . . . H 2 26.75 7.807 33.71 1 51.25 ? C05 4GF 501 D 1 HETATM 6 N N06 4GF . . . H 2 26.072 8.572 34.596 1 49.07 ? N06 4GF 501 D 1 HETATM 7 N N07 4GF . . . H 2 26.446 9.857 34.282 1 51.3 ? N07 4GF 501 D 1 HETATM 8 C C08 4GF . . . H 2 27.418 9.892 33.178 1 53.74 ? C08 4GF 501 D 1 HETATM 9 N N09 4GF . . . H 2 27.908 11.087 32.676 1 54.38 ? N09 4GF 501 D 1 HETATM 10 C C10 4GF . . . H 2 27.432 12.2 33.306 1 55.06 ? C10 4GF 501 D 1 HETATM 11 C C11 4GF . . . H 2 26.592 12.221 34.409 1 52.13 ? C11 4GF 501 D 1 HETATM 12 C C12 4GF . . . H 2 26.053 11.046 34.91 1 49.69 ? C12 4GF 501 D 1 HETATM 13 C C13 4GF . . . H 2 29.719 8.643 29.696 1 59.5 ? C13 4GF 501 D 1 HETATM 14 C C14 4GF . . . H 2 30.067 7.478 28.979 1 57.78 ? C14 4GF 501 D 1 HETATM 15 C C15 4GF . . . H 2 30.66 7.925 27.748 1 58.33 ? C15 4GF 501 D 1 HETATM 16 N N16 4GF . . . H 2 30.649 9.297 27.68 1 61.48 ? N16 4GF 501 D 1 HETATM 17 N N17 4GF . . . H 2 30.073 9.703 28.873 1 60.55 ? N17 4GF 501 D 1 HETATM 18 C C18 4GF . . . H 2 31.235 7.143 26.603 1 56.49 ? C18 4GF 501 D 1 HETATM 19 C C19 4GF . . . H 2 31.573 5.69 26.936 1 56.19 ? C19 4GF 501 D 1 HETATM 20 C C20 4GF . . . H 2 32.17 5.011 25.707 1 58.27 ? C20 4GF 501 D 1 HETATM 21 N N21 4GF . . . H 2 31.241 5.031 24.564 1 63.29 ? N21 4GF 501 D 1 HETATM 22 C C22 4GF . . . H 2 30.912 6.429 24.218 1 58.71 ? C22 4GF 501 D 1 HETATM 23 C C23 4GF . . . H 2 30.281 7.173 25.397 1 57.5 ? C23 4GF 501 D 1 HETATM 24 C C24 4GF . . . H 2 31.602 4.163 23.42 1 68.91 ? C24 4GF 501 D 1 HETATM 25 C C25 4GF . . . H 2 30.757 4.454 22.19 1 71.46 ? C25 4GF 501 D 1 HETATM 26 C C26 4GF . . . H 2 31.501 2.679 23.75 1 68.27 ? C26 4GF 501 D 1 HETATM 27 C C27 4GF . . . H 2 29.888 11.084 29.132 1 61.49 ? C27 4GF 501 D 1 HETATM 28 C C28 4GF . . . H 2 28.622 11.685 29.173 1 62.42 ? C28 4GF 501 D 1 HETATM 29 C C29 4GF . . . H 2 28.421 12.999 29.509 1 62.7 ? C29 4GF 501 D 1 HETATM 30 C C30 4GF . . . H 2 29.532 13.788 29.808 1 64.11 ? C30 4GF 501 D 1 HETATM 31 C C31 4GF . . . H 2 30.802 13.218 29.75 1 64.96 ? C31 4GF 501 D 1 HETATM 32 C C32 4GF . . . H 2 30.983 11.879 29.456 1 62.93 ? C32 4GF 501 D 1 HETATM 33 F F33 4GF . . . H 2 27.548 10.922 28.861 1 62.38 ? F33 4GF 501 D 1 HETATM 34 C C34 4GF . . . H 2 29.382 15.246 30.197 1 62.86 ? C34 4GF 501 D 1 HETATM 35 C C35 4GF . . . H 2 28.111 16.021 29.974 1 63.23 ? C35 4GF 501 D 1 HETATM 36 C C36 4GF . . . H 2 29.275 16.256 29.086 1 63.3 ? C36 4GF 501 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 36 #