data_4YPQ # _model_server_result.job_id dxEhIwFs_nkOSW6lTtSnzA _model_server_result.datetime_utc '2024-10-10 16:24:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ypq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4YPQ # _exptl.entry_id 4YPQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 444.79 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-{1-[2-chloro-6-(trifluoromethyl)benzoyl]-1H-indazol-3-yl}benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4YPQ _cell.length_a 173.809 _cell.length_b 173.809 _cell.length_c 67.221 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YPQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 191 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 455 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 191 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 455 _struct_conn.ptnr2_symmetry 5_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.02 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C22 H12 Cl F3 N2 O3' _chem_comp.formula_weight 444.79 _chem_comp.id 4F1 _chem_comp.mon_nstd_flag . _chem_comp.name '4-{1-[2-chloro-6-(trifluoromethyl)benzoyl]-1H-indazol-3-yl}benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C 4F1 doub 1 n n O C 4F1 sing 2 n n C C1 4F1 sing 3 n n C1 C4 4F1 doub 4 n y C1 C2 4F1 sing 5 n y C4 C5 4F1 sing 6 n y C2 C3 4F1 doub 7 n y C5 C6 4F1 doub 8 n y C3 C6 4F1 sing 9 n y C6 C7 4F1 sing 10 n n C12 C11 4F1 doub 11 n y C12 C13 4F1 sing 12 n y C11 C10 4F1 sing 13 n y C7 N 4F1 doub 14 n y C7 C21 4F1 sing 15 n y C13 C14 4F1 doub 16 n y N N1 4F1 sing 17 n y F C15 4F1 sing 18 n n C10 CL 4F1 sing 19 n n C10 C9 4F1 doub 20 n y C14 C9 4F1 sing 21 n y C14 C15 4F1 sing 22 n n C9 C8 4F1 sing 23 n n C21 C20 4F1 doub 24 n y C21 C16 4F1 sing 25 n y C15 F2 4F1 sing 26 n n C15 F1 4F1 sing 27 n n N1 C8 4F1 sing 28 n n N1 C16 4F1 sing 29 n y C20 C19 4F1 sing 30 n y C8 O2 4F1 doub 31 n n C16 C17 4F1 doub 32 n y C19 C18 4F1 doub 33 n y C17 C18 4F1 sing 34 n y C4 H1 4F1 sing 35 n n C5 H2 4F1 sing 36 n n C13 H3 4F1 sing 37 n n C17 H4 4F1 sing 38 n n C20 H5 4F1 sing 39 n n C12 H6 4F1 sing 40 n n C11 H7 4F1 sing 41 n n C19 H8 4F1 sing 42 n n C18 H9 4F1 sing 43 n n C3 H10 4F1 sing 44 n n C2 H11 4F1 sing 45 n n O H12 4F1 sing 46 n n # _atom_sites.entry_id 4YPQ _atom_sites.fract_transf_matrix[1][1] 0.005753 _atom_sites.fract_transf_matrix[1][2] 0.003322 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006644 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014876 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4F1 A 1 601 1 4F1 4F1 . C 3 MG A 1 602 1 MG MG . D 4 HOH A 1 701 22 HOH HOH . D 4 HOH A 2 702 101 HOH HOH . D 4 HOH A 3 703 5 HOH HOH . D 4 HOH A 4 704 18 HOH HOH . D 4 HOH A 5 705 41 HOH HOH . D 4 HOH A 6 706 74 HOH HOH . D 4 HOH A 7 707 17 HOH HOH . D 4 HOH A 8 708 35 HOH HOH . D 4 HOH A 9 709 50 HOH HOH . D 4 HOH A 10 710 68 HOH HOH . D 4 HOH A 11 711 102 HOH HOH . D 4 HOH A 12 712 43 HOH HOH . D 4 HOH A 13 713 71 HOH HOH . D 4 HOH A 14 714 99 HOH HOH . D 4 HOH A 15 715 46 HOH HOH . D 4 HOH A 16 716 21 HOH HOH . D 4 HOH A 17 717 98 HOH HOH . D 4 HOH A 18 718 16 HOH HOH . D 4 HOH A 19 719 13 HOH HOH . D 4 HOH A 20 720 63 HOH HOH . D 4 HOH A 21 721 61 HOH HOH . D 4 HOH A 22 722 23 HOH HOH . D 4 HOH A 23 723 75 HOH HOH . D 4 HOH A 24 724 26 HOH HOH . D 4 HOH A 25 725 54 HOH HOH . D 4 HOH A 26 726 79 HOH HOH . D 4 HOH A 27 727 40 HOH HOH . D 4 HOH A 28 728 9 HOH HOH . D 4 HOH A 29 729 10 HOH HOH . D 4 HOH A 30 730 52 HOH HOH . D 4 HOH A 31 731 28 HOH HOH . D 4 HOH A 32 732 7 HOH HOH . D 4 HOH A 33 733 34 HOH HOH . D 4 HOH A 34 734 3 HOH HOH . D 4 HOH A 35 735 59 HOH HOH . D 4 HOH A 36 736 87 HOH HOH . D 4 HOH A 37 737 37 HOH HOH . D 4 HOH A 38 738 1 HOH HOH . D 4 HOH A 39 739 15 HOH HOH . D 4 HOH A 40 740 60 HOH HOH . D 4 HOH A 41 741 30 HOH HOH . D 4 HOH A 42 742 86 HOH HOH . D 4 HOH A 43 743 58 HOH HOH . D 4 HOH A 44 744 73 HOH HOH . D 4 HOH A 45 745 20 HOH HOH . D 4 HOH A 46 746 90 HOH HOH . D 4 HOH A 47 747 32 HOH HOH . D 4 HOH A 48 748 6 HOH HOH . D 4 HOH A 49 749 67 HOH HOH . D 4 HOH A 50 750 51 HOH HOH . D 4 HOH A 51 751 2 HOH HOH . D 4 HOH A 52 752 47 HOH HOH . D 4 HOH A 53 753 8 HOH HOH . D 4 HOH A 54 754 57 HOH HOH . D 4 HOH A 55 755 65 HOH HOH . D 4 HOH A 56 756 4 HOH HOH . D 4 HOH A 57 757 130 HOH HOH . D 4 HOH A 58 758 14 HOH HOH . D 4 HOH A 59 759 33 HOH HOH . D 4 HOH A 60 760 44 HOH HOH . D 4 HOH A 61 761 62 HOH HOH . D 4 HOH A 62 762 129 HOH HOH . D 4 HOH A 63 763 109 HOH HOH . D 4 HOH A 64 764 24 HOH HOH . D 4 HOH A 65 765 49 HOH HOH . D 4 HOH A 66 766 89 HOH HOH . D 4 HOH A 67 767 48 HOH HOH . D 4 HOH A 68 768 55 HOH HOH . D 4 HOH A 69 769 27 HOH HOH . D 4 HOH A 70 770 36 HOH HOH . D 4 HOH A 71 771 96 HOH HOH . D 4 HOH A 72 772 105 HOH HOH . D 4 HOH A 73 773 139 HOH HOH . D 4 HOH A 74 774 77 HOH HOH . D 4 HOH A 75 775 29 HOH HOH . D 4 HOH A 76 776 31 HOH HOH . D 4 HOH A 77 777 39 HOH HOH . D 4 HOH A 78 778 97 HOH HOH . D 4 HOH A 79 779 11 HOH HOH . D 4 HOH A 80 780 128 HOH HOH . D 4 HOH A 81 781 38 HOH HOH . D 4 HOH A 82 782 95 HOH HOH . D 4 HOH A 83 783 85 HOH HOH . D 4 HOH A 84 784 12 HOH HOH . D 4 HOH A 85 785 113 HOH HOH . D 4 HOH A 86 786 103 HOH HOH . D 4 HOH A 87 787 78 HOH HOH . D 4 HOH A 88 788 100 HOH HOH . D 4 HOH A 89 789 93 HOH HOH . D 4 HOH A 90 790 69 HOH HOH . D 4 HOH A 91 791 80 HOH HOH . D 4 HOH A 92 792 131 HOH HOH . D 4 HOH A 93 793 112 HOH HOH . D 4 HOH A 94 794 111 HOH HOH . D 4 HOH A 95 795 106 HOH HOH . D 4 HOH A 96 796 115 HOH HOH . D 4 HOH A 97 797 81 HOH HOH . D 4 HOH A 98 798 76 HOH HOH . D 4 HOH A 99 799 82 HOH HOH . D 4 HOH A 100 800 124 HOH HOH . D 4 HOH A 101 801 64 HOH HOH . D 4 HOH A 102 802 45 HOH HOH . D 4 HOH A 103 803 118 HOH HOH . D 4 HOH A 104 804 117 HOH HOH . D 4 HOH A 105 805 122 HOH HOH . D 4 HOH A 106 806 91 HOH HOH . D 4 HOH A 107 807 116 HOH HOH . D 4 HOH A 108 808 88 HOH HOH . D 4 HOH A 109 809 138 HOH HOH . D 4 HOH A 110 810 119 HOH HOH . D 4 HOH A 111 811 104 HOH HOH . D 4 HOH A 112 812 25 HOH HOH . D 4 HOH A 113 813 72 HOH HOH . D 4 HOH A 114 814 127 HOH HOH . D 4 HOH A 115 815 121 HOH HOH . D 4 HOH A 116 816 42 HOH HOH . D 4 HOH A 117 817 108 HOH HOH . D 4 HOH A 118 818 110 HOH HOH . D 4 HOH A 119 819 94 HOH HOH . D 4 HOH A 120 820 107 HOH HOH . D 4 HOH A 121 821 136 HOH HOH . D 4 HOH A 122 822 114 HOH HOH . D 4 HOH A 123 823 66 HOH HOH . D 4 HOH A 124 824 137 HOH HOH . D 4 HOH A 125 825 92 HOH HOH . D 4 HOH A 126 826 56 HOH HOH . D 4 HOH A 127 827 123 HOH HOH . D 4 HOH A 128 828 140 HOH HOH . D 4 HOH A 129 829 53 HOH HOH . D 4 HOH A 130 830 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 4F1 . . . B 2 -30.573 16.947 -24.656 1 35.45 ? N1 4F1 601 A 1 HETATM 2 C C4 4F1 . . . B 2 -27.286 15.92 -29.161 1 29.34 ? C4 4F1 601 A 1 HETATM 3 C C5 4F1 . . . B 2 -27.946 16.3 -28.014 1 29.17 ? C5 4F1 601 A 1 HETATM 4 C C6 4F1 . . . B 2 -28.742 15.401 -27.329 1 42.82 ? C6 4F1 601 A 1 HETATM 5 C C7 4F1 . . . B 2 -29.434 15.787 -26.069 1 39.26 ? C7 4F1 601 A 1 HETATM 6 C C8 4F1 . . . B 2 -31.249 18.045 -24.193 1 40.02 ? C8 4F1 601 A 1 HETATM 7 C C10 4F1 . . . B 2 -30.069 20.022 -25.23 1 59.93 ? C10 4F1 601 A 1 HETATM 8 C C13 4F1 . . . B 2 -32.439 20.966 -26.255 1 41.83 ? C13 4F1 601 A 1 HETATM 9 C C15 4F1 . . . B 2 -33.665 18.951 -25.497 1 44.45 ? C15 4F1 601 A 1 HETATM 10 C C17 4F1 . . . B 2 -30.885 15.199 -22.871 1 36.81 ? C17 4F1 601 A 1 HETATM 11 C C20 4F1 . . . B 2 -29.428 13.628 -24.645 1 28.32 ? C20 4F1 601 A 1 HETATM 12 C C21 4F1 . . . B 2 -29.7 14.945 -24.957 1 35.11 ? C21 4F1 601 A 1 HETATM 13 O O2 4F1 . . . B 2 -31.614 18.106 -23.053 1 35.72 ? O2 4F1 601 A 1 HETATM 14 C C9 4F1 . . . B 2 -31.23 19.302 -25.014 1 42.26 ? C9 4F1 601 A 1 HETATM 15 C C14 4F1 . . . B 2 -32.425 19.771 -25.556 1 50.35 ? C14 4F1 601 A 1 HETATM 16 F F2 4F1 . . . B 2 -34.524 19.325 -26.263 1 69.45 ? F2 4F1 601 A 1 HETATM 17 F F1 4F1 . . . B 2 -33.471 17.791 -25.805 1 41.28 ? F1 4F1 601 A 1 HETATM 18 F F 4F1 . . . B 2 -34.178 18.924 -24.384 1 54.59 ? F 4F1 601 A 1 HETATM 19 C C12 4F1 . . . B 2 -31.269 21.666 -26.451 1 40.3 ? C12 4F1 601 A 1 HETATM 20 C C11 4F1 . . . B 2 -30.077 21.191 -25.946 1 51.49 ? C11 4F1 601 A 1 HETATM 21 CL CL 4F1 . . . B 2 -28.575 19.454 -24.593 1 53.05 ? CL 4F1 601 A 1 HETATM 22 N N 4F1 . . . B 2 -29.951 16.987 -25.879 1 36.32 ? N 4F1 601 A 1 HETATM 23 C C16 4F1 . . . B 2 -30.434 15.718 -24.064 1 33.58 ? C16 4F1 601 A 1 HETATM 24 C C19 4F1 . . . B 2 -29.891 13.106 -23.459 1 33.48 ? C19 4F1 601 A 1 HETATM 25 C C18 4F1 . . . B 2 -30.604 13.882 -22.58 1 37.79 ? C18 4F1 601 A 1 HETATM 26 C C3 4F1 . . . B 2 -28.867 14.117 -27.825 1 33.86 ? C3 4F1 601 A 1 HETATM 27 C C2 4F1 . . . B 2 -28.212 13.742 -28.975 1 38.25 ? C2 4F1 601 A 1 HETATM 28 C C1 4F1 . . . B 2 -27.408 14.636 -29.652 1 38.76 ? C1 4F1 601 A 1 HETATM 29 C C 4F1 . . . B 2 -26.666 14.203 -30.857 1 52.87 ? C 4F1 601 A 1 HETATM 30 O O 4F1 . . . B 2 -26.729 13.075 -31.272 1 51.54 ? O 4F1 601 A 1 HETATM 31 O O1 4F1 . . . B 2 -25.959 15.102 -31.406 1 52.46 ? O1 4F1 601 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #