data_4YPS # _model_server_result.job_id tbRCvCaw03Ku7JNoHuvhHw _model_server_result.datetime_utc '2025-02-05 17:06:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yps # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 4YPS # _exptl.entry_id 4YPS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 399.42 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{6-[(3R)-3-(3-fluorophenyl)morpholin-4-yl]imidazo[1,2-b]pyridazin-3-yl}benzonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4YPS _cell.length_a 106.481 _cell.length_b 106.481 _cell.length_c 204.511 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YPS _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H18 F N5 O' _chem_comp.formula_weight 399.42 _chem_comp.id 4F6 _chem_comp.mon_nstd_flag . _chem_comp.name 4-{6-[(3R)-3-(3-fluorophenyl)morpholin-4-yl]imidazo[1,2-b]pyridazin-3-yl}benzonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N5 C23 4F6 trip 1 n n C23 C20 4F6 sing 2 n n C20 C19 4F6 doub 3 n y C20 C21 4F6 sing 4 n y C19 C18 4F6 sing 5 n y C21 C22 4F6 doub 6 n y C2 C3 4F6 doub 7 n y C2 C1 4F6 sing 8 n y C18 C17 4F6 doub 9 n y C3 C4 4F6 sing 10 n y F C1 4F6 sing 11 n n C1 C6 4F6 doub 12 n y C22 C17 4F6 sing 13 n y C17 C16 4F6 sing 14 n n C4 C5 4F6 doub 15 n y C6 C5 4F6 sing 16 n y C5 C7 4F6 sing 17 n n C16 C15 4F6 doub 18 n y C16 N3 4F6 sing 19 n y C15 N4 4F6 sing 20 n y N3 N2 4F6 sing 21 n y N3 C12 4F6 sing 22 n y N2 C11 4F6 doub 23 n y C7 C8 4F6 sing 24 n n C7 N1 4F6 sing 25 n n N4 C12 4F6 doub 26 n y C8 O 4F6 sing 27 n n C12 C13 4F6 sing 28 n y C11 N1 4F6 sing 29 n n C11 C14 4F6 sing 30 n y N1 C10 4F6 sing 31 n n C10 C9 4F6 sing 32 n n C13 C14 4F6 doub 33 n y O C9 4F6 sing 34 n n C2 H1 4F6 sing 35 n n C3 H2 4F6 sing 36 n n C13 H12 4F6 sing 37 n n C14 H13 4F6 sing 38 n n C15 H14 4F6 sing 39 n n C18 H15 4F6 sing 40 n n C19 H16 4F6 sing 41 n n C21 H17 4F6 sing 42 n n C22 H18 4F6 sing 43 n n C10 H10 4F6 sing 44 n n C10 H11 4F6 sing 45 n n C9 H8 4F6 sing 46 n n C9 H9 4F6 sing 47 n n C8 H7 4F6 sing 48 n n C8 H6 4F6 sing 49 n n C7 H5 4F6 sing 50 n n C6 H4 4F6 sing 51 n n C4 H3 4F6 sing 52 n n # _atom_sites.entry_id 4YPS _atom_sites.fract_transf_matrix[1][1] 0.009391 _atom_sites.fract_transf_matrix[1][2] 0.005422 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010844 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00489 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4F6 A 1 801 1 4F6 LI1 . C 3 SO4 A 1 802 1 SO4 SO4 . D 3 SO4 A 1 803 2 SO4 SO4 . E 3 SO4 A 1 804 3 SO4 SO4 . F 3 SO4 A 1 805 4 SO4 SO4 . G 4 HOH A 1 901 21 HOH HOH . G 4 HOH A 2 902 4 HOH HOH . G 4 HOH A 3 903 40 HOH HOH . G 4 HOH A 4 904 6 HOH HOH . G 4 HOH A 5 905 49 HOH HOH . G 4 HOH A 6 906 27 HOH HOH . G 4 HOH A 7 907 44 HOH HOH . G 4 HOH A 8 908 36 HOH HOH . G 4 HOH A 9 909 26 HOH HOH . G 4 HOH A 10 910 35 HOH HOH . G 4 HOH A 11 911 1 HOH HOH . G 4 HOH A 12 912 2 HOH HOH . G 4 HOH A 13 913 3 HOH HOH . G 4 HOH A 14 914 5 HOH HOH . G 4 HOH A 15 915 7 HOH HOH . G 4 HOH A 16 916 8 HOH HOH . G 4 HOH A 17 917 9 HOH HOH . G 4 HOH A 18 918 10 HOH HOH . G 4 HOH A 19 919 11 HOH HOH . G 4 HOH A 20 920 12 HOH HOH . G 4 HOH A 21 921 13 HOH HOH . G 4 HOH A 22 922 14 HOH HOH . G 4 HOH A 23 923 15 HOH HOH . G 4 HOH A 24 924 16 HOH HOH . G 4 HOH A 25 925 17 HOH HOH . G 4 HOH A 26 926 18 HOH HOH . G 4 HOH A 27 927 19 HOH HOH . G 4 HOH A 28 928 20 HOH HOH . G 4 HOH A 29 929 22 HOH HOH . G 4 HOH A 30 930 23 HOH HOH . G 4 HOH A 31 931 24 HOH HOH . G 4 HOH A 32 932 25 HOH HOH . G 4 HOH A 33 933 28 HOH HOH . G 4 HOH A 34 934 29 HOH HOH . G 4 HOH A 35 935 30 HOH HOH . G 4 HOH A 36 936 31 HOH HOH . G 4 HOH A 37 937 32 HOH HOH . G 4 HOH A 38 938 33 HOH HOH . G 4 HOH A 39 939 34 HOH HOH . G 4 HOH A 40 940 37 HOH HOH . G 4 HOH A 41 941 38 HOH HOH . G 4 HOH A 42 942 39 HOH HOH . G 4 HOH A 43 943 41 HOH HOH . G 4 HOH A 44 944 42 HOH HOH . G 4 HOH A 45 945 43 HOH HOH . G 4 HOH A 46 946 45 HOH HOH . G 4 HOH A 47 947 46 HOH HOH . G 4 HOH A 48 948 47 HOH HOH . G 4 HOH A 49 949 48 HOH HOH . G 4 HOH A 50 950 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4F6 . . . B 2 -20.427 -45.949 -14.848 1 71.93 ? C1 4F6 801 A 1 HETATM 2 C C2 4F6 . . . B 2 -20.052 -46.882 -15.813 1 69.58 ? C2 4F6 801 A 1 HETATM 3 C C3 4F6 . . . B 2 -18.989 -47.739 -15.573 1 62.61 ? C3 4F6 801 A 1 HETATM 4 C C11 4F6 . . . B 2 -18.165 -44.358 -11.093 1 51.4 ? C11 4F6 801 A 1 HETATM 5 C C12 4F6 . . . B 2 -17.494 -41.653 -11.327 1 62.88 ? C12 4F6 801 A 1 HETATM 6 C C13 4F6 . . . B 2 -18.053 -42.139 -10.144 1 57.12 ? C13 4F6 801 A 1 HETATM 7 C C14 4F6 . . . B 2 -18.399 -43.478 -10.033 1 52.72 ? C14 4F6 801 A 1 HETATM 8 C C15 4F6 . . . B 2 -16.594 -40.518 -12.981 1 54.08 ? C15 4F6 801 A 1 HETATM 9 C C16 4F6 . . . B 2 -16.733 -41.834 -13.353 1 59.76 ? C16 4F6 801 A 1 HETATM 10 C C17 4F6 . . . B 2 -16.388 -42.492 -14.661 1 58.13 ? C17 4F6 801 A 1 HETATM 11 C C18 4F6 . . . B 2 -16.289 -41.677 -15.783 1 64.8 ? C18 4F6 801 A 1 HETATM 12 C C19 4F6 . . . B 2 -15.971 -42.206 -17.036 1 66.47 ? C19 4F6 801 A 1 HETATM 13 C C20 4F6 . . . B 2 -15.722 -43.563 -17.168 1 68.95 ? C20 4F6 801 A 1 HETATM 14 C C21 4F6 . . . B 2 -15.81 -44.392 -16.059 1 62.22 ? C21 4F6 801 A 1 HETATM 15 C C22 4F6 . . . B 2 -16.139 -43.866 -14.808 1 59.91 ? C22 4F6 801 A 1 HETATM 16 C C23 4F6 . . . B 2 -15.445 -44.06 -18.319 1 79.94 ? C23 4F6 801 A 1 HETATM 17 N N5 4F6 . . . B 2 -15.2 -44.476 -19.369 1 84.92 ? N5 4F6 801 A 1 HETATM 18 N N3 4F6 . . . B 2 -17.296 -42.498 -12.329 1 54.35 ? N3 4F6 801 A 1 HETATM 19 N N2 4F6 . . . B 2 -17.629 -43.85 -12.222 1 48.21 ? N2 4F6 801 A 1 HETATM 20 N N4 4F6 . . . B 2 -17.071 -40.426 -11.722 1 61.38 ? N4 4F6 801 A 1 HETATM 21 N N1 4F6 . . . B 2 -18.519 -45.731 -11.088 1 55.45 ? N1 4F6 801 A 1 HETATM 22 C C10 4F6 . . . B 2 -19.579 -46.239 -10.211 1 58.52 ? C10 4F6 801 A 1 HETATM 23 C C9 4F6 . . . B 2 -19.469 -47.74 -10 1 70.4 ? C9 4F6 801 A 1 HETATM 24 O O 4F6 . . . B 2 -18.119 -48.118 -10.132 1 73.41 ? O 4F6 801 A 1 HETATM 25 C C8 4F6 . . . B 2 -17.761 -48.062 -11.496 1 57.13 ? C8 4F6 801 A 1 HETATM 26 C C7 4F6 . . . B 2 -17.908 -46.654 -12.073 1 56.29 ? C7 4F6 801 A 1 HETATM 27 C C5 4F6 . . . B 2 -18.679 -46.718 -13.359 1 58.35 ? C5 4F6 801 A 1 HETATM 28 C C6 4F6 . . . B 2 -19.748 -45.862 -13.628 1 65.66 ? C6 4F6 801 A 1 HETATM 29 F F 4F6 . . . B 2 -21.46 -45.118 -15.101 1 82.69 ? F 4F6 801 A 1 HETATM 30 C C4 4F6 . . . B 2 -18.313 -47.645 -14.351 1 70.48 ? C4 4F6 801 A 1 HETATM 31 H H1 4F6 . . . B 2 -20.59 -46.936 -16.752 1 83.5 ? H1 4F6 801 A 1 HETATM 32 H H2 4F6 . . . B 2 -18.69 -48.469 -16.315 1 75.13 ? H2 4F6 801 A 1 HETATM 33 H H12 4F6 . . . B 2 -18.228 -41.466 -9.314 1 68.55 ? H12 4F6 801 A 1 HETATM 34 H H13 4F6 . . . B 2 -18.84 -43.847 -9.115 1 63.26 ? H13 4F6 801 A 1 HETATM 35 H H14 4F6 . . . B 2 -16.181 -39.714 -13.579 1 64.9 ? H14 4F6 801 A 1 HETATM 36 H H15 4F6 . . . B 2 -16.477 -40.615 -15.687 1 77.76 ? H15 4F6 801 A 1 HETATM 37 H H16 4F6 . . . B 2 -15.907 -41.556 -17.9 1 79.77 ? H16 4F6 801 A 1 HETATM 38 H H17 4F6 . . . B 2 -15.629 -45.455 -16.166 1 74.67 ? H17 4F6 801 A 1 HETATM 39 H H18 4F6 . . . B 2 -16.2 -44.52 -13.947 1 71.9 ? H18 4F6 801 A 1 HETATM 40 H H10 4F6 . . . B 2 -20.552 -46.007 -10.649 1 70.23 ? H10 4F6 801 A 1 HETATM 41 H H11 4F6 . . . B 2 -19.521 -45.734 -9.244 1 70.23 ? H11 4F6 801 A 1 HETATM 42 H H8 4F6 . . . B 2 -20.077 -48.265 -10.739 1 84.48 ? H8 4F6 801 A 1 HETATM 43 H H9 4F6 . . . B 2 -19.833 -48.003 -9.004 1 84.48 ? H9 4F6 801 A 1 HETATM 44 H H7 4F6 . . . B 2 -18.391 -48.751 -12.062 1 68.55 ? H7 4F6 801 A 1 HETATM 45 H H6 4F6 . . . B 2 -16.726 -48.391 -11.609 1 68.55 ? H6 4F6 801 A 1 HETATM 46 H H5 4F6 . . . B 2 -16.895 -46.291 -12.299 1 67.55 ? H5 4F6 801 A 1 HETATM 47 H H4 4F6 . . . B 2 -20.051 -45.129 -12.891 1 78.8 ? H4 4F6 801 A 1 HETATM 48 H H3 4F6 . . . B 2 -17.484 -48.315 -14.16 1 84.57 ? H3 4F6 801 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 48 #