data_4YQ0 # _model_server_result.job_id pd_UXOj1D3gsUAQhmxyLhw _model_server_result.datetime_utc '2024-10-19 09:30:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yq0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4YQ0 # _exptl.entry_id 4YQ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 252.657 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-amino-N-(4-chlorobenzyl)-1,2,5-oxadiazole-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4YQ0 _cell.length_a 94.746 _cell.length_b 94.746 _cell.length_c 178.511 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YQ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H9 Cl N4 O2' _chem_comp.formula_weight 252.657 _chem_comp.id 4FM _chem_comp.mon_nstd_flag . _chem_comp.name 4-amino-N-(4-chlorobenzyl)-1,2,5-oxadiazole-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C7 4FM sing 1 n n C7 C8 4FM doub 2 n y C7 C6 4FM sing 3 n y C8 C9 4FM sing 4 n y C6 C5 4FM doub 5 n y C9 C4 4FM doub 6 n y C5 C4 4FM sing 7 n y C4 C3 4FM sing 8 n n C3 N3 4FM sing 9 n n N3 C2 4FM sing 10 n n N2 C1 4FM doub 11 n y N2 O 4FM sing 12 n y C2 C1 4FM sing 13 n n C2 O1 4FM doub 14 n n C1 C 4FM sing 15 n y O N1 4FM sing 16 n y C N1 4FM doub 17 n y C N 4FM sing 18 n n C5 H5 4FM sing 19 n n C9 H8 4FM sing 20 n n C6 H6 4FM sing 21 n n C8 H7 4FM sing 22 n n C3 H4 4FM sing 23 n n C3 H3 4FM sing 24 n n N H1 4FM sing 25 n n N H 4FM sing 26 n n N3 H2 4FM sing 27 n n # _atom_sites.entry_id 4YQ0 _atom_sites.fract_transf_matrix[1][1] 0.010555 _atom_sites.fract_transf_matrix[1][2] 0.006094 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005602 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4FM A 1 301 1 4FM UNL . C 3 HOH A 1 401 125 HOH HOH . C 3 HOH A 2 402 84 HOH HOH . C 3 HOH A 3 403 174 HOH HOH . C 3 HOH A 4 404 30 HOH HOH . C 3 HOH A 5 405 171 HOH HOH . C 3 HOH A 6 406 37 HOH HOH . C 3 HOH A 7 407 92 HOH HOH . C 3 HOH A 8 408 57 HOH HOH . C 3 HOH A 9 409 166 HOH HOH . C 3 HOH A 10 410 47 HOH HOH . C 3 HOH A 11 411 9 HOH HOH . C 3 HOH A 12 412 63 HOH HOH . C 3 HOH A 13 413 97 HOH HOH . C 3 HOH A 14 414 83 HOH HOH . C 3 HOH A 15 415 111 HOH HOH . C 3 HOH A 16 416 94 HOH HOH . C 3 HOH A 17 417 147 HOH HOH . C 3 HOH A 18 418 58 HOH HOH . C 3 HOH A 19 419 24 HOH HOH . C 3 HOH A 20 420 27 HOH HOH . C 3 HOH A 21 421 52 HOH HOH . C 3 HOH A 22 422 66 HOH HOH . C 3 HOH A 23 423 175 HOH HOH . C 3 HOH A 24 424 90 HOH HOH . C 3 HOH A 25 425 14 HOH HOH . C 3 HOH A 26 426 162 HOH HOH . C 3 HOH A 27 427 140 HOH HOH . C 3 HOH A 28 428 87 HOH HOH . C 3 HOH A 29 429 91 HOH HOH . C 3 HOH A 30 430 2 HOH HOH . C 3 HOH A 31 431 170 HOH HOH . C 3 HOH A 32 432 64 HOH HOH . C 3 HOH A 33 433 35 HOH HOH . C 3 HOH A 34 434 26 HOH HOH . C 3 HOH A 35 435 182 HOH HOH . C 3 HOH A 36 436 19 HOH HOH . C 3 HOH A 37 437 143 HOH HOH . C 3 HOH A 38 438 7 HOH HOH . C 3 HOH A 39 439 51 HOH HOH . C 3 HOH A 40 440 89 HOH HOH . C 3 HOH A 41 441 98 HOH HOH . C 3 HOH A 42 442 168 HOH HOH . C 3 HOH A 43 443 165 HOH HOH . C 3 HOH A 44 444 75 HOH HOH . C 3 HOH A 45 445 77 HOH HOH . C 3 HOH A 46 446 73 HOH HOH . C 3 HOH A 47 447 13 HOH HOH . C 3 HOH A 48 448 85 HOH HOH . C 3 HOH A 49 449 18 HOH HOH . C 3 HOH A 50 450 68 HOH HOH . C 3 HOH A 51 451 123 HOH HOH . C 3 HOH A 52 452 129 HOH HOH . C 3 HOH A 53 453 11 HOH HOH . C 3 HOH A 54 454 20 HOH HOH . C 3 HOH A 55 455 81 HOH HOH . C 3 HOH A 56 456 160 HOH HOH . C 3 HOH A 57 457 17 HOH HOH . C 3 HOH A 58 458 3 HOH HOH . C 3 HOH A 59 459 4 HOH HOH . C 3 HOH A 60 460 154 HOH HOH . C 3 HOH A 61 461 5 HOH HOH . C 3 HOH A 62 462 46 HOH HOH . C 3 HOH A 63 463 183 HOH HOH . C 3 HOH A 64 464 71 HOH HOH . C 3 HOH A 65 465 62 HOH HOH . C 3 HOH A 66 466 155 HOH HOH . C 3 HOH A 67 467 16 HOH HOH . C 3 HOH A 68 468 59 HOH HOH . C 3 HOH A 69 469 29 HOH HOH . C 3 HOH A 70 470 103 HOH HOH . C 3 HOH A 71 471 102 HOH HOH . C 3 HOH A 72 472 23 HOH HOH . C 3 HOH A 73 473 128 HOH HOH . C 3 HOH A 74 474 32 HOH HOH . C 3 HOH A 75 475 61 HOH HOH . C 3 HOH A 76 476 74 HOH HOH . C 3 HOH A 77 477 43 HOH HOH . C 3 HOH A 78 478 93 HOH HOH . C 3 HOH A 79 479 6 HOH HOH . C 3 HOH A 80 480 70 HOH HOH . C 3 HOH A 81 481 45 HOH HOH . C 3 HOH A 82 482 186 HOH HOH . C 3 HOH A 83 483 153 HOH HOH . C 3 HOH A 84 484 67 HOH HOH . C 3 HOH A 85 485 152 HOH HOH . C 3 HOH A 86 486 95 HOH HOH . C 3 HOH A 87 487 21 HOH HOH . C 3 HOH A 88 488 180 HOH HOH . C 3 HOH A 89 489 163 HOH HOH . C 3 HOH A 90 490 115 HOH HOH . C 3 HOH A 91 491 100 HOH HOH . C 3 HOH A 92 492 114 HOH HOH . C 3 HOH A 93 493 65 HOH HOH . C 3 HOH A 94 494 133 HOH HOH . C 3 HOH A 95 495 42 HOH HOH . C 3 HOH A 96 496 79 HOH HOH . C 3 HOH A 97 497 142 HOH HOH . C 3 HOH A 98 498 28 HOH HOH . C 3 HOH A 99 499 145 HOH HOH . C 3 HOH A 100 500 72 HOH HOH . C 3 HOH A 101 501 34 HOH HOH . C 3 HOH A 102 502 48 HOH HOH . C 3 HOH A 103 503 38 HOH HOH . C 3 HOH A 104 504 86 HOH HOH . C 3 HOH A 105 505 120 HOH HOH . C 3 HOH A 106 506 121 HOH HOH . C 3 HOH A 107 507 188 HOH HOH . C 3 HOH A 108 508 8 HOH HOH . C 3 HOH A 109 509 15 HOH HOH . C 3 HOH A 110 510 112 HOH HOH . C 3 HOH A 111 511 99 HOH HOH . C 3 HOH A 112 512 53 HOH HOH . C 3 HOH A 113 513 104 HOH HOH . C 3 HOH A 114 514 54 HOH HOH . C 3 HOH A 115 515 136 HOH HOH . C 3 HOH A 116 516 1 HOH HOH . C 3 HOH A 117 517 101 HOH HOH . C 3 HOH A 118 518 169 HOH HOH . C 3 HOH A 119 519 22 HOH HOH . C 3 HOH A 120 520 10 HOH HOH . C 3 HOH A 121 521 96 HOH HOH . C 3 HOH A 122 522 164 HOH HOH . C 3 HOH A 123 523 187 HOH HOH . C 3 HOH A 124 524 36 HOH HOH . C 3 HOH A 125 525 167 HOH HOH . C 3 HOH A 126 526 126 HOH HOH . C 3 HOH A 127 527 56 HOH HOH . C 3 HOH A 128 528 25 HOH HOH . C 3 HOH A 129 529 39 HOH HOH . C 3 HOH A 130 530 82 HOH HOH . C 3 HOH A 131 531 80 HOH HOH . C 3 HOH A 132 532 184 HOH HOH . C 3 HOH A 133 533 31 HOH HOH . C 3 HOH A 134 534 108 HOH HOH . C 3 HOH A 135 535 116 HOH HOH . C 3 HOH A 136 536 110 HOH HOH . C 3 HOH A 137 537 113 HOH HOH . C 3 HOH A 138 538 12 HOH HOH . C 3 HOH A 139 539 176 HOH HOH . C 3 HOH A 140 540 161 HOH HOH . C 3 HOH A 141 541 44 HOH HOH . C 3 HOH A 142 542 106 HOH HOH . C 3 HOH A 143 543 127 HOH HOH . C 3 HOH A 144 544 33 HOH HOH . C 3 HOH A 145 545 40 HOH HOH . C 3 HOH A 146 546 76 HOH HOH . C 3 HOH A 147 547 69 HOH HOH . C 3 HOH A 148 548 88 HOH HOH . C 3 HOH A 149 549 55 HOH HOH . C 3 HOH A 150 550 78 HOH HOH . C 3 HOH A 151 551 60 HOH HOH . C 3 HOH A 152 552 138 HOH HOH . C 3 HOH A 153 553 137 HOH HOH . C 3 HOH A 154 554 117 HOH HOH . C 3 HOH A 155 555 173 HOH HOH . C 3 HOH A 156 556 130 HOH HOH . C 3 HOH A 157 557 122 HOH HOH . C 3 HOH A 158 558 139 HOH HOH . C 3 HOH A 159 559 149 HOH HOH . C 3 HOH A 160 560 109 HOH HOH . C 3 HOH A 161 561 157 HOH HOH . C 3 HOH A 162 562 131 HOH HOH . C 3 HOH A 163 563 181 HOH HOH . C 3 HOH A 164 564 172 HOH HOH . C 3 HOH A 165 565 151 HOH HOH . C 3 HOH A 166 566 105 HOH HOH . C 3 HOH A 167 567 156 HOH HOH . C 3 HOH A 168 568 159 HOH HOH . C 3 HOH A 169 569 158 HOH HOH . C 3 HOH A 170 570 178 HOH HOH . C 3 HOH A 171 571 118 HOH HOH . C 3 HOH A 172 572 132 HOH HOH . C 3 HOH A 173 573 49 HOH HOH . C 3 HOH A 174 574 146 HOH HOH . C 3 HOH A 175 575 141 HOH HOH . C 3 HOH A 176 576 135 HOH HOH . C 3 HOH A 177 577 41 HOH HOH . C 3 HOH A 178 578 150 HOH HOH . C 3 HOH A 179 579 124 HOH HOH . C 3 HOH A 180 580 148 HOH HOH . C 3 HOH A 181 581 144 HOH HOH . C 3 HOH A 182 582 119 HOH HOH . C 3 HOH A 183 583 107 HOH HOH . C 3 HOH A 184 584 50 HOH HOH . C 3 HOH A 185 585 134 HOH HOH . C 3 HOH A 186 586 179 HOH HOH . C 3 HOH A 187 587 185 HOH HOH . C 3 HOH A 188 588 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 4FM . . . B 2 -16.716 40.137 -11.24 1 23.36 ? C5 4FM 301 A 1 HETATM 2 C C9 4FM . . . B 2 -19.134 40.134 -11.431 1 24.46 ? C9 4FM 301 A 1 HETATM 3 C C6 4FM . . . B 2 -16.597 39.834 -12.59 1 22.79 ? C6 4FM 301 A 1 HETATM 4 C C8 4FM . . . B 2 -19.022 39.826 -12.812 1 24.02 ? C8 4FM 301 A 1 HETATM 5 C C4 4FM . . . B 2 -17.962 40.293 -10.664 1 26.81 ? C4 4FM 301 A 1 HETATM 6 C C7 4FM . . . B 2 -17.753 39.7 -13.341 1 25.45 ? C7 4FM 301 A 1 HETATM 7 C C1 4FM . . . B 2 -21.287 41.523 -7.579 1 18.18 ? C1 4FM 301 A 1 HETATM 8 C C 4FM . . . B 2 -22.065 42.401 -6.69 1 21.53 ? C 4FM 301 A 1 HETATM 9 C C2 4FM . . . B 2 -19.869 41.664 -7.914 1 20.34 ? C2 4FM 301 A 1 HETATM 10 C C3 4FM . . . B 2 -18.015 40.66 -9.207 1 23.97 ? C3 4FM 301 A 1 HETATM 11 N N2 4FM . . . B 2 -22.117 40.543 -7.998 1 20.05 ? N2 4FM 301 A 1 HETATM 12 N N1 4FM . . . B 2 -23.317 41.872 -6.637 1 23.6 ? N1 4FM 301 A 1 HETATM 13 N N 4FM . . . B 2 -21.611 43.509 -6.061 1 20.11 ? N 4FM 301 A 1 HETATM 14 N N3 4FM . . . B 2 -19.403 40.682 -8.75 1 21.47 ? N3 4FM 301 A 1 HETATM 15 O O1 4FM . . . B 2 -19.165 42.575 -7.464 1 18.92 ? O1 4FM 301 A 1 HETATM 16 O O 4FM . . . B 2 -23.297 40.757 -7.443 1 25 ? O 4FM 301 A 1 HETATM 17 CL CL 4FM . . . B 2 -17.537 39.396 -15.036 1 25.48 ? CL 4FM 301 A 1 HETATM 18 H H5 4FM . . . B 2 -15.82 40.252 -10.633 1 28.03 ? H5 4FM 301 A 1 HETATM 19 H H8 4FM . . . B 2 -20.114 40.246 -10.97 1 29.36 ? H8 4FM 301 A 1 HETATM 20 H H6 4FM . . . B 2 -15.627 39.702 -13.066 1 27.35 ? H6 4FM 301 A 1 HETATM 21 H H7 4FM . . . B 2 -19.904 39.693 -13.437 1 28.83 ? H7 4FM 301 A 1 HETATM 22 H H4 4FM . . . B 2 -17.54 41.622 -9.021 1 28.76 ? H4 4FM 301 A 1 HETATM 23 H H3 4FM . . . B 2 -17.484 39.933 -8.594 1 28.76 ? H3 4FM 301 A 1 HETATM 24 H H1 4FM . . . B 2 -20.647 43.799 -6.185 1 24.13 ? H1 4FM 301 A 1 HETATM 25 H H 4FM . . . B 2 -22.225 44.054 -5.464 1 24.13 ? H 4FM 301 A 1 HETATM 26 H H2 4FM . . . B 2 -20.015 39.941 -9.076 1 25.76 ? H2 4FM 301 A 1 # _model_server_stats.io_time_ms 98 _model_server_stats.parse_time_ms 138 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #