data_4YQ3 # _model_server_result.job_id k7s_yyfGcH44S-hb3_K5_Q _model_server_result.datetime_utc '2024-10-19 07:36:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yq3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4YQ3 # _exptl.entry_id 4YQ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 377.436 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(1-{[(3-methylbenzoyl)amino]methyl}cyclopentyl)-2,1-benzoxazole-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4YQ3 _cell.length_a 98.062 _cell.length_b 98.062 _cell.length_c 176.131 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YQ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H23 N3 O3' _chem_comp.formula_weight 377.436 _chem_comp.id 4G1 _chem_comp.mon_nstd_flag . _chem_comp.name N-(1-{[(3-methylbenzoyl)amino]methyl}cyclopentyl)-2,1-benzoxazole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C10 4G1 sing 1 n n C11 C12 4G1 sing 2 n n C10 C9 4G1 sing 3 n n C12 C13 4G1 sing 4 n n C3 C4 4G1 doub 5 n y C3 C2 4G1 sing 6 n y C9 C13 4G1 sing 7 n n C9 C8 4G1 sing 8 n n C9 N1 4G1 sing 9 n n C4 C5 4G1 sing 10 n y N C8 4G1 sing 11 n n N C7 4G1 sing 12 n n O1 C14 4G1 doub 13 n n C2 C1 4G1 doub 14 n y N1 C14 4G1 sing 15 n n C5 C7 4G1 sing 16 n n C5 C6 4G1 doub 17 n y C14 C15 4G1 sing 18 n n C7 O 4G1 doub 19 n n C20 O2 4G1 sing 20 n y C20 C21 4G1 doub 21 n y C1 C6 4G1 sing 22 n y C1 C 4G1 sing 23 n n C15 C21 4G1 sing 24 n y C15 C16 4G1 doub 25 n y O2 N2 4G1 sing 26 n y C21 C19 4G1 sing 27 n y C16 C17 4G1 sing 28 n y N2 C19 4G1 doub 29 n y C19 C18 4G1 sing 30 n y C17 C18 4G1 doub 31 n y C3 H1 4G1 sing 32 n n C17 H2 4G1 sing 33 n n C4 H3 4G1 sing 34 n n C16 H4 4G1 sing 35 n n C2 H5 4G1 sing 36 n n C18 H6 4G1 sing 37 n n C6 H7 4G1 sing 38 n n C20 H8 4G1 sing 39 n n C11 H9 4G1 sing 40 n n C11 H10 4G1 sing 41 n n C12 H11 4G1 sing 42 n n C12 H12 4G1 sing 43 n n C10 H13 4G1 sing 44 n n C10 H14 4G1 sing 45 n n C13 H15 4G1 sing 46 n n C13 H16 4G1 sing 47 n n C H17 4G1 sing 48 n n C H18 4G1 sing 49 n n C H19 4G1 sing 50 n n C8 H20 4G1 sing 51 n n C8 H21 4G1 sing 52 n n N1 H22 4G1 sing 53 n n N H23 4G1 sing 54 n n # _atom_sites.entry_id 4YQ3 _atom_sites.fract_transf_matrix[1][1] 0.010198 _atom_sites.fract_transf_matrix[1][2] 0.005888 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011775 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005678 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4G1 A 1 301 1 4G1 UNL . C 3 HOH A 1 401 73 HOH HOH . C 3 HOH A 2 402 55 HOH HOH . C 3 HOH A 3 403 67 HOH HOH . C 3 HOH A 4 404 36 HOH HOH . C 3 HOH A 5 405 35 HOH HOH . C 3 HOH A 6 406 9 HOH HOH . C 3 HOH A 7 407 97 HOH HOH . C 3 HOH A 8 408 13 HOH HOH . C 3 HOH A 9 409 86 HOH HOH . C 3 HOH A 10 410 42 HOH HOH . C 3 HOH A 11 411 10 HOH HOH . C 3 HOH A 12 412 16 HOH HOH . C 3 HOH A 13 413 93 HOH HOH . C 3 HOH A 14 414 28 HOH HOH . C 3 HOH A 15 415 65 HOH HOH . C 3 HOH A 16 416 15 HOH HOH . C 3 HOH A 17 417 58 HOH HOH . C 3 HOH A 18 418 34 HOH HOH . C 3 HOH A 19 419 88 HOH HOH . C 3 HOH A 20 420 21 HOH HOH . C 3 HOH A 21 421 19 HOH HOH . C 3 HOH A 22 422 59 HOH HOH . C 3 HOH A 23 423 80 HOH HOH . C 3 HOH A 24 424 54 HOH HOH . C 3 HOH A 25 425 64 HOH HOH . C 3 HOH A 26 426 53 HOH HOH . C 3 HOH A 27 427 1 HOH HOH . C 3 HOH A 28 428 71 HOH HOH . C 3 HOH A 29 429 8 HOH HOH . C 3 HOH A 30 430 99 HOH HOH . C 3 HOH A 31 431 43 HOH HOH . C 3 HOH A 32 432 98 HOH HOH . C 3 HOH A 33 433 41 HOH HOH . C 3 HOH A 34 434 24 HOH HOH . C 3 HOH A 35 435 33 HOH HOH . C 3 HOH A 36 436 5 HOH HOH . C 3 HOH A 37 437 82 HOH HOH . C 3 HOH A 38 438 11 HOH HOH . C 3 HOH A 39 439 23 HOH HOH . C 3 HOH A 40 440 66 HOH HOH . C 3 HOH A 41 441 45 HOH HOH . C 3 HOH A 42 442 38 HOH HOH . C 3 HOH A 43 443 17 HOH HOH . C 3 HOH A 44 444 18 HOH HOH . C 3 HOH A 45 445 6 HOH HOH . C 3 HOH A 46 446 2 HOH HOH . C 3 HOH A 47 447 57 HOH HOH . C 3 HOH A 48 448 20 HOH HOH . C 3 HOH A 49 449 39 HOH HOH . C 3 HOH A 50 450 4 HOH HOH . C 3 HOH A 51 451 3 HOH HOH . C 3 HOH A 52 452 72 HOH HOH . C 3 HOH A 53 453 30 HOH HOH . C 3 HOH A 54 454 7 HOH HOH . C 3 HOH A 55 455 31 HOH HOH . C 3 HOH A 56 456 91 HOH HOH . C 3 HOH A 57 457 32 HOH HOH . C 3 HOH A 58 458 61 HOH HOH . C 3 HOH A 59 459 49 HOH HOH . C 3 HOH A 60 460 56 HOH HOH . C 3 HOH A 61 461 40 HOH HOH . C 3 HOH A 62 462 14 HOH HOH . C 3 HOH A 63 463 27 HOH HOH . C 3 HOH A 64 464 47 HOH HOH . C 3 HOH A 65 465 37 HOH HOH . C 3 HOH A 66 466 85 HOH HOH . C 3 HOH A 67 467 60 HOH HOH . C 3 HOH A 68 468 22 HOH HOH . C 3 HOH A 69 469 48 HOH HOH . C 3 HOH A 70 470 46 HOH HOH . C 3 HOH A 71 471 84 HOH HOH . C 3 HOH A 72 472 83 HOH HOH . C 3 HOH A 73 473 12 HOH HOH . C 3 HOH A 74 474 79 HOH HOH . C 3 HOH A 75 475 77 HOH HOH . C 3 HOH A 76 476 90 HOH HOH . C 3 HOH A 77 477 100 HOH HOH . C 3 HOH A 78 478 25 HOH HOH . C 3 HOH A 79 479 81 HOH HOH . C 3 HOH A 80 480 94 HOH HOH . C 3 HOH A 81 481 89 HOH HOH . C 3 HOH A 82 482 75 HOH HOH . C 3 HOH A 83 483 76 HOH HOH . C 3 HOH A 84 484 51 HOH HOH . C 3 HOH A 85 485 96 HOH HOH . C 3 HOH A 86 486 87 HOH HOH . C 3 HOH A 87 487 26 HOH HOH . C 3 HOH A 88 488 69 HOH HOH . C 3 HOH A 89 489 95 HOH HOH . C 3 HOH A 90 490 68 HOH HOH . C 3 HOH A 91 491 50 HOH HOH . C 3 HOH A 92 492 92 HOH HOH . C 3 HOH A 93 493 78 HOH HOH . C 3 HOH A 94 494 44 HOH HOH . C 3 HOH A 95 495 29 HOH HOH . C 3 HOH A 96 496 74 HOH HOH . C 3 HOH A 97 497 70 HOH HOH . C 3 HOH A 98 498 62 HOH HOH . C 3 HOH A 99 499 52 HOH HOH . C 3 HOH A 100 500 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 4G1 . . . B 2 -16.163 47.687 -9.951 1 23.59 ? C3 4G1 301 A 1 HETATM 2 C C17 4G1 . . . B 2 -18.985 42.239 -5.652 1 17.04 ? C17 4G1 301 A 1 HETATM 3 C C4 4G1 . . . B 2 -15.638 46.406 -9.851 1 21.3 ? C4 4G1 301 A 1 HETATM 4 C C16 4G1 . . . B 2 -18.102 41.828 -6.715 1 20.2 ? C16 4G1 301 A 1 HETATM 5 C C2 4G1 . . . B 2 -17.064 48.155 -9 1 23.92 ? C2 4G1 301 A 1 HETATM 6 C C18 4G1 . . . B 2 -20.236 41.734 -5.514 1 18.71 ? C18 4G1 301 A 1 HETATM 7 C C6 4G1 . . . B 2 -16.921 46.06 -7.83 1 21.07 ? C6 4G1 301 A 1 HETATM 8 C C20 4G1 . . . B 2 -20.521 39.39 -8.228 1 16.96 ? C20 4G1 301 A 1 HETATM 9 C C21 4G1 . . . B 2 -19.787 40.333 -7.533 1 18.34 ? C21 4G1 301 A 1 HETATM 10 C C5 4G1 . . . B 2 -16.023 45.601 -8.787 1 21.91 ? C5 4G1 301 A 1 HETATM 11 C C15 4G1 . . . B 2 -18.492 40.906 -7.632 1 18.95 ? C15 4G1 301 A 1 HETATM 12 C C1 4G1 . . . B 2 -17.446 47.34 -7.938 1 22.74 ? C1 4G1 301 A 1 HETATM 13 C C19 4G1 . . . B 2 -20.668 40.755 -6.464 1 20.45 ? C19 4G1 301 A 1 HETATM 14 C C7 4G1 . . . B 2 -15.487 44.23 -8.621 1 21.08 ? C7 4G1 301 A 1 HETATM 15 C C14 4G1 . . . B 2 -17.605 40.515 -8.752 1 18.76 ? C14 4G1 301 A 1 HETATM 16 C C11 4G1 . . . B 2 -15.876 39.911 -12.005 1 15.11 ? C11 4G1 301 A 1 HETATM 17 C C12 4G1 . . . B 2 -14.737 39.252 -11.3 1 16.43 ? C12 4G1 301 A 1 HETATM 18 C C10 4G1 . . . B 2 -16.05 41.271 -11.348 1 12.66 ? C10 4G1 301 A 1 HETATM 19 C C13 4G1 . . . B 2 -14.785 39.754 -9.865 1 17.04 ? C13 4G1 301 A 1 HETATM 20 C C9 4G1 . . . B 2 -15.446 41.151 -9.927 1 19.57 ? C9 4G1 301 A 1 HETATM 21 C C 4G1 . . . B 2 -18.417 47.81 -6.912 1 15.53 ? C 4G1 301 A 1 HETATM 22 C C8 4G1 . . . B 2 -14.388 42.277 -9.682 1 18.28 ? C8 4G1 301 A 1 HETATM 23 N N2 4G1 . . . B 2 -21.839 40.075 -6.57 1 25.78 ? N2 4G1 301 A 1 HETATM 24 N N1 4G1 . . . B 2 -16.479 41.317 -8.884 1 17.07 ? N1 4G1 301 A 1 HETATM 25 N N 4G1 . . . B 2 -14.952 43.636 -9.758 1 22.17 ? N 4G1 301 A 1 HETATM 26 O O 4G1 . . . B 2 -15.513 43.638 -7.541 1 22.04 ? O 4G1 301 A 1 HETATM 27 O O1 4G1 . . . B 2 -17.871 39.568 -9.474 1 23.28 ? O1 4G1 301 A 1 HETATM 28 O O2 4G1 . . . B 2 -21.736 39.264 -7.626 1 21.15 ? O2 4G1 301 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #