data_4YQ4 # _model_server_result.job_id nMa-jDeQm_DrR22xNqQy2g _model_server_result.datetime_utc '2024-12-01 18:55:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yq4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4YQ4 # _exptl.entry_id 4YQ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 243.261 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[(3-hydroxybenzyl)amino]pyridine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4YQ4 _cell.length_a 93.885 _cell.length_b 93.885 _cell.length_c 178.327 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YQ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H13 N3 O2' _chem_comp.formula_weight 243.261 _chem_comp.id 4G3 _chem_comp.mon_nstd_flag . _chem_comp.name 6-[(3-hydroxybenzyl)amino]pyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C8 4G3 doub 1 n y C9 C10 4G3 sing 2 n y C8 C7 4G3 sing 3 n y O1 C10 4G3 sing 4 n n C10 C11 4G3 doub 5 n y C7 C6 4G3 doub 6 n y C11 C6 4G3 sing 7 n y C6 C5 4G3 sing 8 n n C5 N1 4G3 sing 9 n n N1 C4 4G3 sing 10 n n C3 C4 4G3 doub 11 n y C3 C2 4G3 sing 12 n y C4 N2 4G3 sing 13 n y C2 C1 4G3 doub 14 n y N2 C12 4G3 doub 15 n y C1 C12 4G3 sing 16 n y C1 C 4G3 sing 17 n n C O 4G3 doub 18 n n C N 4G3 sing 19 n n C8 H1 4G3 sing 20 n n C2 H2 4G3 sing 21 n n C7 H3 4G3 sing 22 n n C9 H4 4G3 sing 23 n n C3 H5 4G3 sing 24 n n C11 H6 4G3 sing 25 n n C12 H7 4G3 sing 26 n n C5 H8 4G3 sing 27 n n C5 H9 4G3 sing 28 n n N H10 4G3 sing 29 n n N H11 4G3 sing 30 n n N1 H12 4G3 sing 31 n n O1 H13 4G3 sing 32 n n # _atom_sites.entry_id 4YQ4 _atom_sites.fract_transf_matrix[1][1] 0.010651 _atom_sites.fract_transf_matrix[1][2] 0.00615 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012299 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005608 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4G3 A 1 301 1 4G3 UNL . C 3 FLC A 1 302 1 FLC FLC . D 4 HOH A 1 401 62 HOH HOH . D 4 HOH A 2 402 110 HOH HOH . D 4 HOH A 3 403 134 HOH HOH . D 4 HOH A 4 404 103 HOH HOH . D 4 HOH A 5 405 89 HOH HOH . D 4 HOH A 6 406 138 HOH HOH . D 4 HOH A 7 407 130 HOH HOH . D 4 HOH A 8 408 76 HOH HOH . D 4 HOH A 9 409 27 HOH HOH . D 4 HOH A 10 410 121 HOH HOH . D 4 HOH A 11 411 139 HOH HOH . D 4 HOH A 12 412 59 HOH HOH . D 4 HOH A 13 413 2 HOH HOH . D 4 HOH A 14 414 109 HOH HOH . D 4 HOH A 15 415 50 HOH HOH . D 4 HOH A 16 416 98 HOH HOH . D 4 HOH A 17 417 116 HOH HOH . D 4 HOH A 18 418 28 HOH HOH . D 4 HOH A 19 419 79 HOH HOH . D 4 HOH A 20 420 49 HOH HOH . D 4 HOH A 21 421 86 HOH HOH . D 4 HOH A 22 422 71 HOH HOH . D 4 HOH A 23 423 90 HOH HOH . D 4 HOH A 24 424 33 HOH HOH . D 4 HOH A 25 425 18 HOH HOH . D 4 HOH A 26 426 93 HOH HOH . D 4 HOH A 27 427 30 HOH HOH . D 4 HOH A 28 428 47 HOH HOH . D 4 HOH A 29 429 16 HOH HOH . D 4 HOH A 30 430 112 HOH HOH . D 4 HOH A 31 431 3 HOH HOH . D 4 HOH A 32 432 55 HOH HOH . D 4 HOH A 33 433 8 HOH HOH . D 4 HOH A 34 434 39 HOH HOH . D 4 HOH A 35 435 56 HOH HOH . D 4 HOH A 36 436 53 HOH HOH . D 4 HOH A 37 437 26 HOH HOH . D 4 HOH A 38 438 11 HOH HOH . D 4 HOH A 39 439 73 HOH HOH . D 4 HOH A 40 440 7 HOH HOH . D 4 HOH A 41 441 123 HOH HOH . D 4 HOH A 42 442 101 HOH HOH . D 4 HOH A 43 443 48 HOH HOH . D 4 HOH A 44 444 115 HOH HOH . D 4 HOH A 45 445 128 HOH HOH . D 4 HOH A 46 446 87 HOH HOH . D 4 HOH A 47 447 41 HOH HOH . D 4 HOH A 48 448 126 HOH HOH . D 4 HOH A 49 449 1 HOH HOH . D 4 HOH A 50 450 37 HOH HOH . D 4 HOH A 51 451 32 HOH HOH . D 4 HOH A 52 452 104 HOH HOH . D 4 HOH A 53 453 95 HOH HOH . D 4 HOH A 54 454 57 HOH HOH . D 4 HOH A 55 455 68 HOH HOH . D 4 HOH A 56 456 135 HOH HOH . D 4 HOH A 57 457 34 HOH HOH . D 4 HOH A 58 458 31 HOH HOH . D 4 HOH A 59 459 14 HOH HOH . D 4 HOH A 60 460 70 HOH HOH . D 4 HOH A 61 461 17 HOH HOH . D 4 HOH A 62 462 84 HOH HOH . D 4 HOH A 63 463 99 HOH HOH . D 4 HOH A 64 464 51 HOH HOH . D 4 HOH A 65 465 117 HOH HOH . D 4 HOH A 66 466 4 HOH HOH . D 4 HOH A 67 467 22 HOH HOH . D 4 HOH A 68 468 122 HOH HOH . D 4 HOH A 69 469 118 HOH HOH . D 4 HOH A 70 470 9 HOH HOH . D 4 HOH A 71 471 83 HOH HOH . D 4 HOH A 72 472 97 HOH HOH . D 4 HOH A 73 473 54 HOH HOH . D 4 HOH A 74 474 124 HOH HOH . D 4 HOH A 75 475 92 HOH HOH . D 4 HOH A 76 476 10 HOH HOH . D 4 HOH A 77 477 75 HOH HOH . D 4 HOH A 78 478 133 HOH HOH . D 4 HOH A 79 479 19 HOH HOH . D 4 HOH A 80 480 77 HOH HOH . D 4 HOH A 81 481 43 HOH HOH . D 4 HOH A 82 482 13 HOH HOH . D 4 HOH A 83 483 29 HOH HOH . D 4 HOH A 84 484 63 HOH HOH . D 4 HOH A 85 485 60 HOH HOH . D 4 HOH A 86 486 21 HOH HOH . D 4 HOH A 87 487 91 HOH HOH . D 4 HOH A 88 488 119 HOH HOH . D 4 HOH A 89 489 74 HOH HOH . D 4 HOH A 90 490 96 HOH HOH . D 4 HOH A 91 491 6 HOH HOH . D 4 HOH A 92 492 25 HOH HOH . D 4 HOH A 93 493 58 HOH HOH . D 4 HOH A 94 494 46 HOH HOH . D 4 HOH A 95 495 61 HOH HOH . D 4 HOH A 96 496 20 HOH HOH . D 4 HOH A 97 497 80 HOH HOH . D 4 HOH A 98 498 42 HOH HOH . D 4 HOH A 99 499 65 HOH HOH . D 4 HOH A 100 500 81 HOH HOH . D 4 HOH A 101 501 23 HOH HOH . D 4 HOH A 102 502 40 HOH HOH . D 4 HOH A 103 503 137 HOH HOH . D 4 HOH A 104 504 127 HOH HOH . D 4 HOH A 105 505 5 HOH HOH . D 4 HOH A 106 506 100 HOH HOH . D 4 HOH A 107 507 12 HOH HOH . D 4 HOH A 108 508 64 HOH HOH . D 4 HOH A 109 509 85 HOH HOH . D 4 HOH A 110 510 131 HOH HOH . D 4 HOH A 111 511 44 HOH HOH . D 4 HOH A 112 512 45 HOH HOH . D 4 HOH A 113 513 72 HOH HOH . D 4 HOH A 114 514 15 HOH HOH . D 4 HOH A 115 515 132 HOH HOH . D 4 HOH A 116 516 105 HOH HOH . D 4 HOH A 117 517 125 HOH HOH . D 4 HOH A 118 518 129 HOH HOH . D 4 HOH A 119 519 66 HOH HOH . D 4 HOH A 120 520 35 HOH HOH . D 4 HOH A 121 521 69 HOH HOH . D 4 HOH A 122 522 113 HOH HOH . D 4 HOH A 123 523 136 HOH HOH . D 4 HOH A 124 524 106 HOH HOH . D 4 HOH A 125 525 52 HOH HOH . D 4 HOH A 126 526 120 HOH HOH . D 4 HOH A 127 527 67 HOH HOH . D 4 HOH A 128 528 102 HOH HOH . D 4 HOH A 129 529 108 HOH HOH . D 4 HOH A 130 530 38 HOH HOH . D 4 HOH A 131 531 114 HOH HOH . D 4 HOH A 132 532 82 HOH HOH . D 4 HOH A 133 533 107 HOH HOH . D 4 HOH A 134 534 36 HOH HOH . D 4 HOH A 135 535 94 HOH HOH . D 4 HOH A 136 536 24 HOH HOH . D 4 HOH A 137 537 111 HOH HOH . D 4 HOH A 138 538 78 HOH HOH . D 4 HOH A 139 539 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 4G3 . . . B 2 -19.633 41.217 -13.61 1 33.71 ? C8 4G3 301 A 1 HETATM 2 C C2 4G3 . . . B 2 -21.137 40.519 -8.521 1 21.68 ? C2 4G3 301 A 1 HETATM 3 C C7 4G3 . . . B 2 -19.218 40.276 -12.657 1 31.54 ? C7 4G3 301 A 1 HETATM 4 C C9 4G3 . . . B 2 -18.914 42.387 -13.816 1 35.34 ? C9 4G3 301 A 1 HETATM 5 C C3 4G3 . . . B 2 -20.047 40.103 -9.271 1 22.99 ? C3 4G3 301 A 1 HETATM 6 C C11 4G3 . . . B 2 -17.304 41.644 -12.102 1 29.93 ? C11 4G3 301 A 1 HETATM 7 C C12 4G3 . . . B 2 -19.669 41.851 -7.139 1 23.4 ? C12 4G3 301 A 1 HETATM 8 C C1 4G3 . . . B 2 -20.955 41.405 -7.454 1 23.06 ? C1 4G3 301 A 1 HETATM 9 C C6 4G3 . . . B 2 -18.062 40.503 -11.9 1 28.15 ? C6 4G3 301 A 1 HETATM 10 C C10 4G3 . . . B 2 -17.758 42.588 -13.065 1 40.5 ? C10 4G3 301 A 1 HETATM 11 C C4 4G3 . . . B 2 -18.779 40.596 -8.875 1 26.62 ? C4 4G3 301 A 1 HETATM 12 C C 4G3 . . . B 2 -22.12 41.87 -6.697 1 23.8 ? C 4G3 301 A 1 HETATM 13 C C5 4G3 . . . B 2 -17.656 39.546 -10.795 1 26.9 ? C5 4G3 301 A 1 HETATM 14 N N2 4G3 . . . B 2 -18.584 41.467 -7.805 1 25.25 ? N2 4G3 301 A 1 HETATM 15 N N 4G3 . . . B 2 -21.993 43.103 -6.075 1 23.47 ? N 4G3 301 A 1 HETATM 16 N N1 4G3 . . . B 2 -17.637 40.313 -9.539 1 21.13 ? N1 4G3 301 A 1 HETATM 17 O O 4G3 . . . B 2 -23.176 41.231 -6.62 1 26.27 ? O 4G3 301 A 1 HETATM 18 O O1 4G3 . . . B 2 -17.01 43.705 -13.181 1 47.63 ? O1 4G3 301 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #