data_4YRC
#
_model_server_result.job_id            5aHUXYX30JdLkjiKs601Cw 
_model_server_result.datetime_utc      '2024-11-23 21:02:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4yrc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":507}' 
#
_entry.id    4YRC 
#
_exptl.entry_id    4YRC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.61 
_cell.angle_gamma         90 
_cell.entry_id            4YRC 
_cell.length_a            65.244 
_cell.length_b            119.366 
_cell.length_c            65.66 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4YRC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_756 -x+2,y,-z+1 -1 0 0 0 1 0 0 0 -1 126.353737 0 65.529714 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 G N N 
? 5 H N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 104 n n 
S C1 DMS sing 105 n n 
S C2 DMS sing 106 n n 
C1 H11 DMS sing 107 n n 
C1 H12 DMS sing 108 n n 
C1 H13 DMS sing 109 n n 
C2 H21 DMS sing 110 n n 
C2 H22 DMS sing 111 n n 
C2 H23 DMS sing 112 n n 
#
_atom_sites.entry_id                     4YRC 
_atom_sites.fract_transf_matrix[1][1]    0.015327 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000968 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008378 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01526 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HIS A 1 501 501 HIS HIS . 
C 3 0P6 A 1 502 1 0P6 089 . 
D 3 0P6 A 1 503 2 0P6 089 . 
E 4 SO4 A 1 504 2 SO4 SO4 . 
F 5 DMS A 1 505 3 DMS DMS . 
G 5 DMS A 1 506 4 DMS DMS . 
H 5 DMS A 1 507 5 DMS DMS . 
I 6 EDO A 1 508 6 EDO EDO . 
J 4 SO4 A 1 509 1 SO4 SO4 . 
K 7 HOH A 1 601 136 HOH HOH . 
K 7 HOH A 2 602 133 HOH HOH . 
K 7 HOH A 3 603 41 HOH HOH . 
K 7 HOH A 4 604 15 HOH HOH . 
K 7 HOH A 5 605 111 HOH HOH . 
K 7 HOH A 6 606 20 HOH HOH . 
K 7 HOH A 7 607 29 HOH HOH . 
K 7 HOH A 8 608 8 HOH HOH . 
K 7 HOH A 9 609 45 HOH HOH . 
K 7 HOH A 10 610 39 HOH HOH . 
K 7 HOH A 11 611 120 HOH HOH . 
K 7 HOH A 12 612 76 HOH HOH . 
K 7 HOH A 13 613 11 HOH HOH . 
K 7 HOH A 14 614 37 HOH HOH . 
K 7 HOH A 15 615 97 HOH HOH . 
K 7 HOH A 16 616 13 HOH HOH . 
K 7 HOH A 17 617 48 HOH HOH . 
K 7 HOH A 18 618 31 HOH HOH . 
K 7 HOH A 19 619 5 HOH HOH . 
K 7 HOH A 20 620 140 HOH HOH . 
K 7 HOH A 21 621 50 HOH HOH . 
K 7 HOH A 22 622 25 HOH HOH . 
K 7 HOH A 23 623 60 HOH HOH . 
K 7 HOH A 24 624 16 HOH HOH . 
K 7 HOH A 25 625 17 HOH HOH . 
K 7 HOH A 26 626 103 HOH HOH . 
K 7 HOH A 27 627 70 HOH HOH . 
K 7 HOH A 28 628 59 HOH HOH . 
K 7 HOH A 29 629 98 HOH HOH . 
K 7 HOH A 30 630 78 HOH HOH . 
K 7 HOH A 31 631 73 HOH HOH . 
K 7 HOH A 32 632 71 HOH HOH . 
K 7 HOH A 33 633 40 HOH HOH . 
K 7 HOH A 34 634 118 HOH HOH . 
K 7 HOH A 35 635 9 HOH HOH . 
K 7 HOH A 36 636 56 HOH HOH . 
K 7 HOH A 37 637 66 HOH HOH . 
K 7 HOH A 38 638 125 HOH HOH . 
K 7 HOH A 39 639 12 HOH HOH . 
K 7 HOH A 40 640 126 HOH HOH . 
K 7 HOH A 41 641 26 HOH HOH . 
K 7 HOH A 42 642 96 HOH HOH . 
K 7 HOH A 43 643 108 HOH HOH . 
K 7 HOH A 44 644 121 HOH HOH . 
K 7 HOH A 45 645 145 HOH HOH . 
K 7 HOH A 46 646 80 HOH HOH . 
K 7 HOH A 47 647 83 HOH HOH . 
K 7 HOH A 48 648 127 HOH HOH . 
K 7 HOH A 49 649 49 HOH HOH . 
K 7 HOH A 50 650 32 HOH HOH . 
K 7 HOH A 51 651 4 HOH HOH . 
K 7 HOH A 52 652 79 HOH HOH . 
K 7 HOH A 53 653 102 HOH HOH . 
K 7 HOH A 54 654 100 HOH HOH . 
K 7 HOH A 55 655 42 HOH HOH . 
K 7 HOH A 56 656 124 HOH HOH . 
K 7 HOH A 57 657 30 HOH HOH . 
K 7 HOH A 58 658 36 HOH HOH . 
K 7 HOH A 59 659 68 HOH HOH . 
K 7 HOH A 60 660 74 HOH HOH . 
K 7 HOH A 61 661 67 HOH HOH . 
K 7 HOH A 62 662 106 HOH HOH . 
K 7 HOH A 63 663 18 HOH HOH . 
K 7 HOH A 64 664 6 HOH HOH . 
K 7 HOH A 65 665 123 HOH HOH . 
K 7 HOH A 66 666 14 HOH HOH . 
K 7 HOH A 67 667 54 HOH HOH . 
K 7 HOH A 68 668 84 HOH HOH . 
K 7 HOH A 69 669 62 HOH HOH . 
K 7 HOH A 70 670 65 HOH HOH . 
K 7 HOH A 71 671 53 HOH HOH . 
K 7 HOH A 72 672 61 HOH HOH . 
K 7 HOH A 73 673 77 HOH HOH . 
K 7 HOH A 74 674 85 HOH HOH . 
K 7 HOH A 75 675 55 HOH HOH . 
K 7 HOH A 76 676 112 HOH HOH . 
K 7 HOH A 77 677 109 HOH HOH . 
K 7 HOH A 78 678 75 HOH HOH . 
K 7 HOH A 79 679 88 HOH HOH . 
K 7 HOH A 80 680 95 HOH HOH . 
K 7 HOH A 81 681 27 HOH HOH . 
K 7 HOH A 82 682 51 HOH HOH . 
K 7 HOH A 83 683 94 HOH HOH . 
K 7 HOH A 84 684 134 HOH HOH . 
K 7 HOH A 85 685 38 HOH HOH . 
K 7 HOH A 86 686 72 HOH HOH . 
K 7 HOH A 87 687 3 HOH HOH . 
K 7 HOH A 88 688 122 HOH HOH . 
K 7 HOH A 89 689 34 HOH HOH . 
K 7 HOH A 90 690 81 HOH HOH . 
K 7 HOH A 91 691 58 HOH HOH . 
K 7 HOH A 92 692 44 HOH HOH . 
K 7 HOH A 93 693 64 HOH HOH . 
K 7 HOH A 94 694 52 HOH HOH . 
K 7 HOH A 95 695 46 HOH HOH . 
K 7 HOH A 96 696 86 HOH HOH . 
K 7 HOH A 97 697 10 HOH HOH . 
K 7 HOH A 98 698 142 HOH HOH . 
K 7 HOH A 99 699 129 HOH HOH . 
K 7 HOH A 100 700 114 HOH HOH . 
K 7 HOH A 101 701 23 HOH HOH . 
K 7 HOH A 102 702 22 HOH HOH . 
K 7 HOH A 103 703 104 HOH HOH . 
K 7 HOH A 104 704 63 HOH HOH . 
K 7 HOH A 105 705 28 HOH HOH . 
K 7 HOH A 106 706 141 HOH HOH . 
K 7 HOH A 107 707 131 HOH HOH . 
K 7 HOH A 108 708 119 HOH HOH . 
K 7 HOH A 109 709 101 HOH HOH . 
K 7 HOH A 110 710 2 HOH HOH . 
K 7 HOH A 111 711 113 HOH HOH . 
K 7 HOH A 112 712 69 HOH HOH . 
K 7 HOH A 113 713 107 HOH HOH . 
K 7 HOH A 114 714 19 HOH HOH . 
K 7 HOH A 115 715 116 HOH HOH . 
K 7 HOH A 116 716 33 HOH HOH . 
K 7 HOH A 117 717 146 HOH HOH . 
K 7 HOH A 118 718 110 HOH HOH . 
K 7 HOH A 119 719 115 HOH HOH . 
K 7 HOH A 120 720 128 HOH HOH . 
K 7 HOH A 121 721 24 HOH HOH . 
K 7 HOH A 122 722 43 HOH HOH . 
K 7 HOH A 123 723 132 HOH HOH . 
K 7 HOH A 124 724 1 HOH HOH . 
K 7 HOH A 125 725 21 HOH HOH . 
K 7 HOH A 126 726 117 HOH HOH . 
K 7 HOH A 127 727 87 HOH HOH . 
K 7 HOH A 128 728 92 HOH HOH . 
K 7 HOH A 129 729 105 HOH HOH . 
K 7 HOH A 130 730 82 HOH HOH . 
K 7 HOH A 131 731 130 HOH HOH . 
K 7 HOH A 132 732 7 HOH HOH . 
K 7 HOH A 133 733 135 HOH HOH . 
K 7 HOH A 134 734 47 HOH HOH . 
K 7 HOH A 135 735 57 HOH HOH . 
K 7 HOH A 136 736 137 HOH HOH . 
K 7 HOH A 137 737 89 HOH HOH . 
K 7 HOH A 138 738 99 HOH HOH . 
K 7 HOH A 139 739 91 HOH HOH . 
K 7 HOH A 140 740 35 HOH HOH . 
K 7 HOH A 141 741 138 HOH HOH . 
K 7 HOH A 142 742 139 HOH HOH . 
K 7 HOH A 143 743 143 HOH HOH . 
K 7 HOH A 144 744 144 HOH HOH . 
K 7 HOH A 145 745 90 HOH HOH . 
K 7 HOH A 146 746 93 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . H 5 67.201 -18.656 16.29 1 52.33 ? S DMS 507 A 1 
HETATM 2 O O DMS . . . H 5 67.238 -19.689 15.242 1 58.27 ? O DMS 507 A 1 
HETATM 3 C C1 DMS . . . H 5 66.805 -19.373 17.784 1 50.81 ? C1 DMS 507 A 1 
HETATM 4 C C2 DMS . . . H 5 68.813 -18.158 16.578 1 48.94 ? C2 DMS 507 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#