data_4YSZ # _model_server_result.job_id ZUobytvNyRRBB6YfskB_CQ _model_server_result.datetime_utc '2025-02-17 19:23:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ysz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":202}' # _entry.id 4YSZ # _exptl.entry_id 4YSZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 381.208 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-iodo-N-[3-(1-methylethoxy)phenyl]benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4YSZ _cell.length_a 123.934 _cell.length_b 126.968 _cell.length_c 219.335 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YSZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M,N,O,P,Y,Z,AA,BA 1 1 E,F,G,H,Q,R,S,T,U,V,W,X,CA,DA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 O N N ? 11 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 191 A CYS 191 1_555 A SG CYS 193 A CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf2 E SG CYS 191 E CYS 191 1_555 E SG CYS 193 E CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc1 B SG CYS 89 B CYS 89 1_555 K FE2 FES . B FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc2 B SG CYS 94 B CYS 94 1_555 K FE2 FES . B FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc3 B SG CYS 97 B CYS 97 1_555 K FE1 FES . B FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc4 B SG CYS 109 B CYS 109 1_555 K FE1 FES . B FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc5 B SG CYS 182 B CYS 182 1_555 L FE3 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc6 B SG CYS 185 B CYS 185 1_555 L FE1 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc7 B SG CYS 188 B CYS 188 1_555 L FE2 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc8 B SG CYS 192 B CYS 192 1_555 M FE4 F3S . B F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc9 B SG CYS 239 B CYS 239 1_555 M FE1 F3S . B F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc10 B SG CYS 245 B CYS 245 1_555 M FE3 F3S . B F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc11 B SG CYS 249 B CYS 249 1_555 L FE4 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc12 C NE2 HIS 131 C HIS 131 1_555 N FE HEM . C HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc13 N FE HEM . C HEM 201 1_555 D NE2 HIS 95 D HIS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc14 F SG CYS 89 F CYS 89 1_555 S FE2 FES . F FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc15 F SG CYS 94 F CYS 94 1_555 S FE2 FES . F FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc16 F SG CYS 97 F CYS 97 1_555 S FE1 FES . F FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc17 F SG CYS 109 F CYS 109 1_555 S FE1 FES . F FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc18 F SG CYS 182 F CYS 182 1_555 T FE3 SF4 . F SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc19 F SG CYS 185 F CYS 185 1_555 T FE1 SF4 . F SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc20 F SG CYS 188 F CYS 188 1_555 T FE2 SF4 . F SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc21 F SG CYS 192 F CYS 192 1_555 U FE4 F3S . F F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc22 F SG CYS 239 F CYS 239 1_555 U FE1 F3S . F F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc23 F SG CYS 245 F CYS 245 1_555 U FE3 F3S . F F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc24 F SG CYS 249 F CYS 249 1_555 T FE4 SF4 . F SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc25 G NE2 HIS 131 G HIS 131 1_555 V FE HEM . G HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc26 V FE HEM . G HEM 201 1_555 H NE2 HIS 95 H HIS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? # _chem_comp.formula 'C16 H16 I N O2' _chem_comp.formula_weight 381.208 _chem_comp.id 12J _chem_comp.mon_nstd_flag . _chem_comp.name 2-iodo-N-[3-(1-methylethoxy)phenyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-Iodo-N-(3-isopropoxyphenyl)benzamide # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag I C1 12J sing 1 n n N C7 12J sing 2 n n N C8 12J sing 3 n n C1 C2 12J doub 4 n y C1 C6 12J sing 5 n y O1 C7 12J doub 6 n n C2 C3 12J sing 7 n y C2 C7 12J sing 8 n n O2 C10 12J sing 9 n n O2 C14 12J sing 10 n n C3 C4 12J doub 11 n y C4 C5 12J sing 12 n y C5 C6 12J doub 13 n y C8 C9 12J doub 14 n y C8 C13 12J sing 15 n y C9 C10 12J sing 16 n y C10 C11 12J doub 17 n y C11 C12 12J sing 18 n y C12 C13 12J doub 19 n y C14 C15 12J sing 20 n n C14 C16 12J sing 21 n n N HN 12J sing 22 n n C3 H3 12J sing 23 n n C4 H4 12J sing 24 n n C5 H5 12J sing 25 n n C6 H6 12J sing 26 n n C9 H9 12J sing 27 n n C11 H11 12J sing 28 n n C12 H12 12J sing 29 n n C13 H13 12J sing 30 n n C14 H14 12J sing 31 n n C15 H15 12J sing 32 n n C15 H15A 12J sing 33 n n C15 H15B 12J sing 34 n n C16 H16 12J sing 35 n n C16 H16A 12J sing 36 n n C16 H16B 12J sing 37 n n # _atom_sites.entry_id 4YSZ _atom_sites.fract_transf_matrix[1][1] 0.008069 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007876 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 MLI A 1 701 701 MLI MLI . J 6 FAD A 1 702 702 FAD FAD . K 7 FES B 1 301 301 FES FES . L 8 SF4 B 1 302 302 SF4 SF4 . M 9 F3S B 1 303 303 F3S F3S . N 10 HEM C 1 201 201 HEM HEM . O 11 12J C 1 202 202 12J 12J . P 12 EPH D 1 201 201 EPH EPH . Q 5 MLI E 1 701 701 MLI MLI . R 6 FAD E 1 702 702 FAD FAD . S 7 FES F 1 301 301 FES FES . T 8 SF4 F 1 302 302 SF4 SF4 . U 9 F3S F 1 303 303 F3S F3S . V 10 HEM G 1 201 201 HEM HEM . W 11 12J G 1 202 202 12J 12J . X 12 EPH H 1 201 201 EPH EPH . Y 13 HOH A 1 801 801 HOH HOH . Y 13 HOH A 2 802 802 HOH HOH . Y 13 HOH A 3 803 803 HOH HOH . Y 13 HOH A 4 804 804 HOH HOH . Z 13 HOH B 1 401 401 HOH HOH . Z 13 HOH B 2 402 402 HOH HOH . AA 13 HOH C 1 301 301 HOH HOH . BA 13 HOH D 1 301 301 HOH HOH . CA 13 HOH E 1 801 801 HOH HOH . CA 13 HOH E 2 802 802 HOH HOH . CA 13 HOH E 3 803 803 HOH HOH . CA 13 HOH E 4 804 804 HOH HOH . CA 13 HOH E 5 805 805 HOH HOH . CA 13 HOH E 6 806 806 HOH HOH . DA 13 HOH H 1 301 301 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 I I 12J . . . O 11 90.207 20.208 59.239 1 70.79 ? I 12J 202 C 1 HETATM 2 N N 12J . . . O 11 92.161 20.833 63.224 1 68.34 ? N 12J 202 C 1 HETATM 3 C C1 12J . . . O 11 91.748 19.11 60.169 1 72.06 ? C1 12J 202 C 1 HETATM 4 O O1 12J . . . O 11 91.657 21.748 61.177 1 66.3 ? O1 12J 202 C 1 HETATM 5 C C2 12J . . . O 11 92.412 19.583 61.301 1 70.11 ? C2 12J 202 C 1 HETATM 6 O O2 12J . . . O 11 89.787 22.428 66.816 1 74.97 ? O2 12J 202 C 1 HETATM 7 C C3 12J . . . O 11 93.426 18.8 61.872 1 71.32 ? C3 12J 202 C 1 HETATM 8 C C4 12J . . . O 11 93.781 17.572 61.326 1 74.52 ? C4 12J 202 C 1 HETATM 9 C C5 12J . . . O 11 93.124 17.101 60.199 1 75.86 ? C5 12J 202 C 1 HETATM 10 C C6 12J . . . O 11 92.115 17.879 59.63 1 75.21 ? C6 12J 202 C 1 HETATM 11 C C7 12J . . . O 11 92.053 20.808 61.873 1 68.77 ? C7 12J 202 C 1 HETATM 12 C C8 12J . . . O 11 91.847 21.923 63.913 1 65.17 ? C8 12J 202 C 1 HETATM 13 C C9 12J . . . O 11 91.025 21.697 64.994 1 65.51 ? C9 12J 202 C 1 HETATM 14 C C10 12J . . . O 11 90.654 22.745 65.811 1 67.96 ? C10 12J 202 C 1 HETATM 15 C C11 12J . . . O 11 91.098 24.045 65.528 1 64.39 ? C11 12J 202 C 1 HETATM 16 C C12 12J . . . O 11 91.942 24.276 64.444 1 61.97 ? C12 12J 202 C 1 HETATM 17 C C13 12J . . . O 11 92.327 23.211 63.637 1 62.69 ? C13 12J 202 C 1 HETATM 18 C C14 12J . . . O 11 90.11 22.445 68.195 1 75.6 ? C14 12J 202 C 1 HETATM 19 C C15 12J . . . O 11 90.29 23.872 68.659 1 77.43 ? C15 12J 202 C 1 HETATM 20 C C16 12J . . . O 11 88.914 21.836 68.931 1 76.19 ? C16 12J 202 C 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #