data_4YTF # _model_server_result.job_id TnmEAlCCG83ExTWx9QZi6w _model_server_result.datetime_utc '2024-10-11 00:27:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ytf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":4000}' # _entry.id 4YTF # _exptl.entry_id 4YTF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 416.761 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~2~-[2-(5-chloro-1H-pyrrolo[2,3-b]pyridin-3-yl)-5-fluoropyrimidin-4-yl]-N-(2,2,2-trifluoroethyl)-L-alaninamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4YTF _cell.length_a 94.012 _cell.length_b 102.068 _cell.length_c 67.795 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YTF _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 170 A GLU 1006 1_555 A N PTR 171 A PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.36 ? covale ? covale2 A C PTR 171 A PTR 1007 1_555 A N PTR 172 A PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale3 A C PTR 172 A PTR 1008 1_555 A N LYS 173 A LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? # _chem_comp.formula 'C16 H13 Cl F4 N6 O' _chem_comp.formula_weight 416.761 _chem_comp.id 4HZ _chem_comp.mon_nstd_flag . _chem_comp.name N~2~-[2-(5-chloro-1H-pyrrolo[2,3-b]pyridin-3-yl)-5-fluoropyrimidin-4-yl]-N-(2,2,2-trifluoroethyl)-L-alaninamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4YTF _atom_sites.fract_transf_matrix[1][1] 0.010637 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009797 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4HZ A 1 4000 4000 4HZ 786 . C 3 HOH A 1 4101 11 HOH HOH . C 3 HOH A 2 4102 46 HOH HOH . C 3 HOH A 3 4103 32 HOH HOH . C 3 HOH A 4 4104 39 HOH HOH . C 3 HOH A 5 4105 36 HOH HOH . C 3 HOH A 6 4106 47 HOH HOH . C 3 HOH A 7 4107 155 HOH HOH . C 3 HOH A 8 4108 73 HOH HOH . C 3 HOH A 9 4109 176 HOH HOH . C 3 HOH A 10 4110 24 HOH HOH . C 3 HOH A 11 4111 26 HOH HOH . C 3 HOH A 12 4112 86 HOH HOH . C 3 HOH A 13 4113 65 HOH HOH . C 3 HOH A 14 4114 17 HOH HOH . C 3 HOH A 15 4115 54 HOH HOH . C 3 HOH A 16 4116 114 HOH HOH . C 3 HOH A 17 4117 92 HOH HOH . C 3 HOH A 18 4118 58 HOH HOH . C 3 HOH A 19 4119 112 HOH HOH . C 3 HOH A 20 4120 96 HOH HOH . C 3 HOH A 21 4121 100 HOH HOH . C 3 HOH A 22 4122 56 HOH HOH . C 3 HOH A 23 4123 66 HOH HOH . C 3 HOH A 24 4124 127 HOH HOH . C 3 HOH A 25 4125 40 HOH HOH . C 3 HOH A 26 4126 142 HOH HOH . C 3 HOH A 27 4127 37 HOH HOH . C 3 HOH A 28 4128 78 HOH HOH . C 3 HOH A 29 4129 33 HOH HOH . C 3 HOH A 30 4130 109 HOH HOH . C 3 HOH A 31 4131 31 HOH HOH . C 3 HOH A 32 4132 124 HOH HOH . C 3 HOH A 33 4133 27 HOH HOH . C 3 HOH A 34 4134 48 HOH HOH . C 3 HOH A 35 4135 85 HOH HOH . C 3 HOH A 36 4136 134 HOH HOH . C 3 HOH A 37 4137 55 HOH HOH . C 3 HOH A 38 4138 139 HOH HOH . C 3 HOH A 39 4139 104 HOH HOH . C 3 HOH A 40 4140 13 HOH HOH . C 3 HOH A 41 4141 110 HOH HOH . C 3 HOH A 42 4142 119 HOH HOH . C 3 HOH A 43 4143 57 HOH HOH . C 3 HOH A 44 4144 107 HOH HOH . C 3 HOH A 45 4145 59 HOH HOH . C 3 HOH A 46 4146 29 HOH HOH . C 3 HOH A 47 4147 45 HOH HOH . C 3 HOH A 48 4148 102 HOH HOH . C 3 HOH A 49 4149 80 HOH HOH . C 3 HOH A 50 4150 62 HOH HOH . C 3 HOH A 51 4151 6 HOH HOH . C 3 HOH A 52 4152 111 HOH HOH . C 3 HOH A 53 4153 160 HOH HOH . C 3 HOH A 54 4154 174 HOH HOH . C 3 HOH A 55 4155 15 HOH HOH . C 3 HOH A 56 4156 153 HOH HOH . C 3 HOH A 57 4157 99 HOH HOH . C 3 HOH A 58 4158 130 HOH HOH . C 3 HOH A 59 4159 146 HOH HOH . C 3 HOH A 60 4160 98 HOH HOH . C 3 HOH A 61 4161 23 HOH HOH . C 3 HOH A 62 4162 7 HOH HOH . C 3 HOH A 63 4163 51 HOH HOH . C 3 HOH A 64 4164 19 HOH HOH . C 3 HOH A 65 4165 76 HOH HOH . C 3 HOH A 66 4166 22 HOH HOH . C 3 HOH A 67 4167 53 HOH HOH . C 3 HOH A 68 4168 150 HOH HOH . C 3 HOH A 69 4169 81 HOH HOH . C 3 HOH A 70 4170 20 HOH HOH . C 3 HOH A 71 4171 131 HOH HOH . C 3 HOH A 72 4172 82 HOH HOH . C 3 HOH A 73 4173 68 HOH HOH . C 3 HOH A 74 4174 141 HOH HOH . C 3 HOH A 75 4175 10 HOH HOH . C 3 HOH A 76 4176 123 HOH HOH . C 3 HOH A 77 4177 163 HOH HOH . C 3 HOH A 78 4178 25 HOH HOH . C 3 HOH A 79 4179 43 HOH HOH . C 3 HOH A 80 4180 70 HOH HOH . C 3 HOH A 81 4181 135 HOH HOH . C 3 HOH A 82 4182 162 HOH HOH . C 3 HOH A 83 4183 121 HOH HOH . C 3 HOH A 84 4184 156 HOH HOH . C 3 HOH A 85 4185 42 HOH HOH . C 3 HOH A 86 4186 147 HOH HOH . C 3 HOH A 87 4187 136 HOH HOH . C 3 HOH A 88 4188 83 HOH HOH . C 3 HOH A 89 4189 120 HOH HOH . C 3 HOH A 90 4190 12 HOH HOH . C 3 HOH A 91 4191 113 HOH HOH . C 3 HOH A 92 4192 75 HOH HOH . C 3 HOH A 93 4193 35 HOH HOH . C 3 HOH A 94 4194 152 HOH HOH . C 3 HOH A 95 4195 157 HOH HOH . C 3 HOH A 96 4196 122 HOH HOH . C 3 HOH A 97 4197 1 HOH HOH . C 3 HOH A 98 4198 34 HOH HOH . C 3 HOH A 99 4199 74 HOH HOH . C 3 HOH A 100 4200 140 HOH HOH . C 3 HOH A 101 4201 101 HOH HOH . C 3 HOH A 102 4202 49 HOH HOH . C 3 HOH A 103 4203 137 HOH HOH . C 3 HOH A 104 4204 44 HOH HOH . C 3 HOH A 105 4205 2 HOH HOH . C 3 HOH A 106 4206 41 HOH HOH . C 3 HOH A 107 4207 28 HOH HOH . C 3 HOH A 108 4208 116 HOH HOH . C 3 HOH A 109 4209 95 HOH HOH . C 3 HOH A 110 4210 67 HOH HOH . C 3 HOH A 111 4211 91 HOH HOH . C 3 HOH A 112 4212 108 HOH HOH . C 3 HOH A 113 4213 105 HOH HOH . C 3 HOH A 114 4214 154 HOH HOH . C 3 HOH A 115 4215 38 HOH HOH . C 3 HOH A 116 4216 79 HOH HOH . C 3 HOH A 117 4217 3 HOH HOH . C 3 HOH A 118 4218 97 HOH HOH . C 3 HOH A 119 4219 175 HOH HOH . C 3 HOH A 120 4220 5 HOH HOH . C 3 HOH A 121 4221 151 HOH HOH . C 3 HOH A 122 4222 30 HOH HOH . C 3 HOH A 123 4223 138 HOH HOH . C 3 HOH A 124 4224 168 HOH HOH . C 3 HOH A 125 4225 64 HOH HOH . C 3 HOH A 126 4226 145 HOH HOH . C 3 HOH A 127 4227 18 HOH HOH . C 3 HOH A 128 4228 171 HOH HOH . C 3 HOH A 129 4229 9 HOH HOH . C 3 HOH A 130 4230 88 HOH HOH . C 3 HOH A 131 4231 4 HOH HOH . C 3 HOH A 132 4232 60 HOH HOH . C 3 HOH A 133 4233 166 HOH HOH . C 3 HOH A 134 4234 126 HOH HOH . C 3 HOH A 135 4235 87 HOH HOH . C 3 HOH A 136 4236 106 HOH HOH . C 3 HOH A 137 4237 128 HOH HOH . C 3 HOH A 138 4238 118 HOH HOH . C 3 HOH A 139 4239 21 HOH HOH . C 3 HOH A 140 4240 149 HOH HOH . C 3 HOH A 141 4241 63 HOH HOH . C 3 HOH A 142 4242 132 HOH HOH . C 3 HOH A 143 4243 103 HOH HOH . C 3 HOH A 144 4244 90 HOH HOH . C 3 HOH A 145 4245 164 HOH HOH . C 3 HOH A 146 4246 125 HOH HOH . C 3 HOH A 147 4247 117 HOH HOH . C 3 HOH A 148 4248 170 HOH HOH . C 3 HOH A 149 4249 50 HOH HOH . C 3 HOH A 150 4250 143 HOH HOH . C 3 HOH A 151 4251 115 HOH HOH . C 3 HOH A 152 4252 94 HOH HOH . C 3 HOH A 153 4253 129 HOH HOH . C 3 HOH A 154 4254 72 HOH HOH . C 3 HOH A 155 4255 173 HOH HOH . C 3 HOH A 156 4256 84 HOH HOH . C 3 HOH A 157 4257 8 HOH HOH . C 3 HOH A 158 4258 89 HOH HOH . C 3 HOH A 159 4259 61 HOH HOH . C 3 HOH A 160 4260 52 HOH HOH . C 3 HOH A 161 4261 71 HOH HOH . C 3 HOH A 162 4262 93 HOH HOH . C 3 HOH A 163 4263 133 HOH HOH . C 3 HOH A 164 4264 161 HOH HOH . C 3 HOH A 165 4265 14 HOH HOH . C 3 HOH A 166 4266 16 HOH HOH . C 3 HOH A 167 4267 169 HOH HOH . C 3 HOH A 168 4268 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4HZ . . . B 2 14.648 14.814 5.708 1 25.55 ? C1 4HZ 4000 A 1 HETATM 2 N N2 4HZ . . . B 2 17.379 10.501 5.122 1 23.8 ? N2 4HZ 4000 A 1 HETATM 3 C C3 4HZ . . . B 2 15.831 15.811 2.147 1 24 ? C3 4HZ 4000 A 1 HETATM 4 C C4 4HZ . . . B 2 15.762 14.695 1.149 1 26.77 ? C4 4HZ 4000 A 1 HETATM 5 C C5 4HZ . . . B 2 16.407 13.035 5.757 1 23.26 ? C5 4HZ 4000 A 1 HETATM 6 C C6 4HZ . . . B 2 17.709 12.614 6.221 1 25.94 ? C6 4HZ 4000 A 1 HETATM 7 C C8 4HZ . . . B 2 16.14 10.944 4.687 1 20.54 ? C8 4HZ 4000 A 1 HETATM 8 C C9 4HZ . . . B 2 15.363 10.035 3.859 1 18.53 ? C9 4HZ 4000 A 1 HETATM 9 C C10 4HZ . . . B 2 15.745 8.749 3.515 1 19.93 ? C10 4HZ 4000 A 1 HETATM 10 C C15 4HZ . . . B 2 11.895 9.932 1.475 1 17.2 ? C15 4HZ 4000 A 1 HETATM 11 F F3 4HZ . . . B 2 18.461 13.39 6.939 1 29.71 ? F3 4HZ 4000 A 1 HETATM 12 C C7 4HZ . . . B 2 18.146 11.333 5.882 1 25.04 ? C7 4HZ 4000 A 1 HETATM 13 N N3 4HZ . . . B 2 15.604 12.179 4.977 1 19.73 ? N3 4HZ 4000 A 1 HETATM 14 N N1 4HZ . . . B 2 15.957 14.282 6.095 1 23.57 ? N1 4HZ 4000 A 1 HETATM 15 C C2 4HZ . . . B 2 14.605 15.233 4.228 1 27.26 ? C2 4HZ 4000 A 1 HETATM 16 N N 4HZ . . . B 2 15.824 15.373 3.537 1 24.11 ? N 4HZ 4000 A 1 HETATM 17 F F2 4HZ . . . B 2 16.786 13.867 1.258 1 26.89 ? F2 4HZ 4000 A 1 HETATM 18 F F1 4HZ . . . B 2 15.782 15.137 -0.105 1 31.08 ? F1 4HZ 4000 A 1 HETATM 19 F F 4HZ . . . B 2 14.645 13.97 1.268 1 26.91 ? F 4HZ 4000 A 1 HETATM 20 O O 4HZ . . . B 2 13.501 15.392 3.651 1 31.14 ? O 4HZ 4000 A 1 HETATM 21 C C 4HZ . . . B 2 14.345 16.05 6.554 1 28.3 ? C 4HZ 4000 A 1 HETATM 22 C C12 4HZ . . . B 2 14.137 10.288 3.191 1 17.51 ? C12 4HZ 4000 A 1 HETATM 23 C C13 4HZ . . . B 2 13.203 11.374 3.086 1 18.36 ? C13 4HZ 4000 A 1 HETATM 24 C C14 4HZ . . . B 2 12.105 11.161 2.223 1 19.79 ? C14 4HZ 4000 A 1 HETATM 25 CL CL 4HZ . . . B 2 10.961 12.413 1.981 1 22.4 ? CL 4HZ 4000 A 1 HETATM 26 N N5 4HZ . . . B 2 12.775 8.87 1.567 1 17.09 ? N5 4HZ 4000 A 1 HETATM 27 C C11 4HZ . . . B 2 13.843 9.074 2.412 1 17.6 ? C11 4HZ 4000 A 1 HETATM 28 N N4 4HZ . . . B 2 14.827 8.17 2.65 1 19.81 ? N4 4HZ 4000 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 139 _model_server_stats.create_model_time_ms 69 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #