data_4YV8 # _model_server_result.job_id NoShU22wfSP2jBZmASGBOg _model_server_result.datetime_utc '2024-10-10 23:26:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yv8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4YV8 # _exptl.entry_id 4YV8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4YV8 _cell.length_a 56.717 _cell.length_b 56.717 _cell.length_c 130.365 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YV8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf2 A SG CYS 56 A CYS 56 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? disulf ? disulf3 A SG CYS 155 A CYS 155 1_555 A SG CYS 204 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? covale ? covale1 A SG CYS 25 A CYS 25 1_555 B C RGL 5 B RGL 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.76 ? covale ? covale2 B CA AG2 1 B AG2 1 1_555 B N1 URE 2 B URE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale3 B C URE 2 B URE 2 1_555 B N SER 3 B SER 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.466 ? covale ? covale4 B C VAL 4 B VAL 4 1_555 B N RGL 5 B RGL 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 337 n n S O2 SO4 doub 338 n n S O3 SO4 sing 339 n n S O4 SO4 sing 340 n n # _atom_sites.entry_id 4YV8 _atom_sites.fract_transf_matrix[1][1] 0.017631 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017631 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007671 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 301 301 SO4 SO4 . D 3 SO4 A 1 302 302 SO4 SO4 . E 3 SO4 A 1 303 303 SO4 SO4 . F 4 HOH A 1 401 402 HOH HOH . F 4 HOH A 2 402 447 HOH HOH . F 4 HOH A 3 403 403 HOH HOH . F 4 HOH A 4 404 404 HOH HOH . F 4 HOH A 5 405 405 HOH HOH . F 4 HOH A 6 406 406 HOH HOH . F 4 HOH A 7 407 407 HOH HOH . F 4 HOH A 8 408 408 HOH HOH . F 4 HOH A 9 409 409 HOH HOH . F 4 HOH A 10 410 410 HOH HOH . F 4 HOH A 11 411 411 HOH HOH . F 4 HOH A 12 412 412 HOH HOH . F 4 HOH A 13 413 413 HOH HOH . F 4 HOH A 14 414 414 HOH HOH . F 4 HOH A 15 415 438 HOH HOH . F 4 HOH A 16 416 415 HOH HOH . F 4 HOH A 17 417 416 HOH HOH . F 4 HOH A 18 418 417 HOH HOH . F 4 HOH A 19 419 418 HOH HOH . F 4 HOH A 20 420 419 HOH HOH . F 4 HOH A 21 421 420 HOH HOH . F 4 HOH A 22 422 421 HOH HOH . F 4 HOH A 23 423 422 HOH HOH . F 4 HOH A 24 424 423 HOH HOH . F 4 HOH A 25 425 424 HOH HOH . F 4 HOH A 26 426 425 HOH HOH . F 4 HOH A 27 427 426 HOH HOH . F 4 HOH A 28 428 427 HOH HOH . F 4 HOH A 29 429 428 HOH HOH . F 4 HOH A 30 430 429 HOH HOH . F 4 HOH A 31 431 430 HOH HOH . F 4 HOH A 32 432 431 HOH HOH . F 4 HOH A 33 433 432 HOH HOH . F 4 HOH A 34 434 433 HOH HOH . F 4 HOH A 35 435 434 HOH HOH . F 4 HOH A 36 436 435 HOH HOH . F 4 HOH A 37 437 439 HOH HOH . F 4 HOH A 38 438 440 HOH HOH . F 4 HOH A 39 439 441 HOH HOH . F 4 HOH A 40 440 437 HOH HOH . F 4 HOH A 41 441 443 HOH HOH . F 4 HOH A 42 442 444 HOH HOH . F 4 HOH A 43 443 445 HOH HOH . F 4 HOH A 44 444 446 HOH HOH . F 4 HOH A 45 445 449 HOH HOH . F 4 HOH A 46 446 450 HOH HOH . F 4 HOH A 47 447 451 HOH HOH . F 4 HOH A 48 448 452 HOH HOH . F 4 HOH A 49 449 453 HOH HOH . F 4 HOH A 50 450 454 HOH HOH . F 4 HOH A 51 451 455 HOH HOH . F 4 HOH A 52 452 456 HOH HOH . F 4 HOH A 53 453 457 HOH HOH . F 4 HOH A 54 454 458 HOH HOH . F 4 HOH A 55 455 459 HOH HOH . F 4 HOH A 56 456 460 HOH HOH . F 4 HOH A 57 457 461 HOH HOH . F 4 HOH A 58 458 462 HOH HOH . F 4 HOH A 59 459 463 HOH HOH . F 4 HOH A 60 460 477 HOH HOH . F 4 HOH A 61 461 464 HOH HOH . F 4 HOH A 62 462 465 HOH HOH . F 4 HOH A 63 463 466 HOH HOH . F 4 HOH A 64 464 467 HOH HOH . F 4 HOH A 65 465 468 HOH HOH . F 4 HOH A 66 466 469 HOH HOH . F 4 HOH A 67 467 470 HOH HOH . F 4 HOH A 68 468 471 HOH HOH . F 4 HOH A 69 469 472 HOH HOH . F 4 HOH A 70 470 473 HOH HOH . F 4 HOH A 71 471 474 HOH HOH . F 4 HOH A 72 472 475 HOH HOH . F 4 HOH A 73 473 476 HOH HOH . F 4 HOH A 74 474 478 HOH HOH . F 4 HOH A 75 475 479 HOH HOH . F 4 HOH A 76 476 480 HOH HOH . F 4 HOH A 77 477 481 HOH HOH . F 4 HOH A 78 478 482 HOH HOH . F 4 HOH A 79 479 483 HOH HOH . F 4 HOH A 80 480 484 HOH HOH . F 4 HOH A 81 481 485 HOH HOH . F 4 HOH A 82 482 486 HOH HOH . F 4 HOH A 83 483 487 HOH HOH . F 4 HOH A 84 484 488 HOH HOH . F 4 HOH A 85 485 489 HOH HOH . F 4 HOH A 86 486 490 HOH HOH . F 4 HOH A 87 487 491 HOH HOH . F 4 HOH A 88 488 492 HOH HOH . F 4 HOH A 89 489 493 HOH HOH . F 4 HOH A 90 490 494 HOH HOH . F 4 HOH A 91 491 495 HOH HOH . F 4 HOH A 92 492 497 HOH HOH . F 4 HOH A 93 493 498 HOH HOH . F 4 HOH A 94 494 496 HOH HOH . F 4 HOH A 95 495 499 HOH HOH . F 4 HOH A 96 496 500 HOH HOH . F 4 HOH A 97 497 501 HOH HOH . F 4 HOH A 98 498 502 HOH HOH . F 4 HOH A 99 499 503 HOH HOH . F 4 HOH A 100 500 504 HOH HOH . F 4 HOH A 101 501 505 HOH HOH . F 4 HOH A 102 502 506 HOH HOH . F 4 HOH A 103 503 507 HOH HOH . F 4 HOH A 104 504 508 HOH HOH . F 4 HOH A 105 505 509 HOH HOH . F 4 HOH A 106 506 510 HOH HOH . F 4 HOH A 107 507 511 HOH HOH . F 4 HOH A 108 508 512 HOH HOH . F 4 HOH A 109 509 513 HOH HOH . F 4 HOH A 110 510 514 HOH HOH . F 4 HOH A 111 511 515 HOH HOH . F 4 HOH A 112 512 516 HOH HOH . F 4 HOH A 113 513 517 HOH HOH . F 4 HOH A 114 514 518 HOH HOH . F 4 HOH A 115 515 519 HOH HOH . F 4 HOH A 116 516 520 HOH HOH . F 4 HOH A 117 517 521 HOH HOH . F 4 HOH A 118 518 522 HOH HOH . F 4 HOH A 119 519 523 HOH HOH . F 4 HOH A 120 520 524 HOH HOH . F 4 HOH A 121 521 525 HOH HOH . F 4 HOH A 122 522 526 HOH HOH . F 4 HOH A 123 523 556 HOH HOH . F 4 HOH A 124 524 527 HOH HOH . F 4 HOH A 125 525 528 HOH HOH . F 4 HOH A 126 526 529 HOH HOH . F 4 HOH A 127 527 530 HOH HOH . F 4 HOH A 128 528 531 HOH HOH . F 4 HOH A 129 529 532 HOH HOH . F 4 HOH A 130 530 533 HOH HOH . F 4 HOH A 131 531 534 HOH HOH . F 4 HOH A 132 532 535 HOH HOH . F 4 HOH A 133 533 536 HOH HOH . F 4 HOH A 134 534 537 HOH HOH . F 4 HOH A 135 535 538 HOH HOH . F 4 HOH A 136 536 539 HOH HOH . F 4 HOH A 137 537 540 HOH HOH . F 4 HOH A 138 538 541 HOH HOH . F 4 HOH A 139 539 542 HOH HOH . F 4 HOH A 140 540 448 HOH HOH . F 4 HOH A 141 541 543 HOH HOH . F 4 HOH A 142 542 544 HOH HOH . F 4 HOH A 143 543 545 HOH HOH . F 4 HOH A 144 544 547 HOH HOH . F 4 HOH A 145 545 548 HOH HOH . F 4 HOH A 146 546 549 HOH HOH . F 4 HOH A 147 547 550 HOH HOH . F 4 HOH A 148 548 551 HOH HOH . F 4 HOH A 149 549 552 HOH HOH . F 4 HOH A 150 550 553 HOH HOH . F 4 HOH A 151 551 554 HOH HOH . F 4 HOH A 152 552 555 HOH HOH . F 4 HOH A 153 553 557 HOH HOH . F 4 HOH A 154 554 558 HOH HOH . F 4 HOH A 155 555 559 HOH HOH . F 4 HOH A 156 556 560 HOH HOH . F 4 HOH A 157 557 561 HOH HOH . F 4 HOH A 158 558 562 HOH HOH . F 4 HOH A 159 559 563 HOH HOH . F 4 HOH A 160 560 564 HOH HOH . F 4 HOH A 161 561 565 HOH HOH . F 4 HOH A 162 562 567 HOH HOH . F 4 HOH A 163 563 568 HOH HOH . F 4 HOH A 164 564 566 HOH HOH . F 4 HOH A 165 565 569 HOH HOH . F 4 HOH A 166 566 570 HOH HOH . F 4 HOH A 167 567 571 HOH HOH . G 4 HOH B 1 101 102 HOH HOH . G 4 HOH B 2 102 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 -20.844 8.944 -32.673 1 25.15 ? S SO4 301 A 1 HETATM 2 O O1 SO4 . . . C 3 -21.827 10.014 -32.533 1 22.7 ? O1 SO4 301 A 1 HETATM 3 O O2 SO4 . . . C 3 -20.619 8.665 -34.092 1 21.33 ? O2 SO4 301 A 1 HETATM 4 O O3 SO4 . . . C 3 -21.335 7.746 -31.999 1 24.57 ? O3 SO4 301 A 1 HETATM 5 O O4 SO4 . . . C 3 -19.593 9.354 -32.046 1 25.44 ? O4 SO4 301 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #