data_4YYX # _model_server_result.job_id '_iUD3-4hL5IniWNdPjvQ6g' _model_server_result.datetime_utc '2024-12-21 13:07:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yyx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 4YYX # _exptl.entry_id 4YYX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4YYX _cell.length_a 41.351 _cell.length_b 72.17 _cell.length_c 76.958 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YYX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 70 n n C O2 FMT sing 71 n n C H FMT sing 72 n n O2 HO2 FMT sing 73 n n # _atom_sites.entry_id 4YYX _atom_sites.fract_transf_matrix[1][1] 0.024183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013856 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012994 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMT A 1 201 2 FMT FMT . D 2 FMT B 1 201 1 FMT FMT . E 3 HOH A 1 301 87 HOH HOH . E 3 HOH A 2 302 187 HOH HOH . E 3 HOH A 3 303 190 HOH HOH . E 3 HOH A 4 304 153 HOH HOH . E 3 HOH A 5 305 191 HOH HOH . E 3 HOH A 6 306 8 HOH HOH . E 3 HOH A 7 307 157 HOH HOH . E 3 HOH A 8 308 38 HOH HOH . E 3 HOH A 9 309 51 HOH HOH . E 3 HOH A 10 310 139 HOH HOH . E 3 HOH A 11 311 104 HOH HOH . E 3 HOH A 12 312 75 HOH HOH . E 3 HOH A 13 313 182 HOH HOH . E 3 HOH A 14 314 6 HOH HOH . E 3 HOH A 15 315 73 HOH HOH . E 3 HOH A 16 316 116 HOH HOH . E 3 HOH A 17 317 12 HOH HOH . E 3 HOH A 18 318 20 HOH HOH . E 3 HOH A 19 319 173 HOH HOH . E 3 HOH A 20 320 101 HOH HOH . E 3 HOH A 21 321 125 HOH HOH . E 3 HOH A 22 322 170 HOH HOH . E 3 HOH A 23 323 155 HOH HOH . E 3 HOH A 24 324 176 HOH HOH . E 3 HOH A 25 325 185 HOH HOH . E 3 HOH A 26 326 46 HOH HOH . E 3 HOH A 27 327 61 HOH HOH . E 3 HOH A 28 328 168 HOH HOH . E 3 HOH A 29 329 56 HOH HOH . E 3 HOH A 30 330 78 HOH HOH . E 3 HOH A 31 331 66 HOH HOH . E 3 HOH A 32 332 16 HOH HOH . E 3 HOH A 33 333 24 HOH HOH . E 3 HOH A 34 334 39 HOH HOH . E 3 HOH A 35 335 92 HOH HOH . E 3 HOH A 36 336 136 HOH HOH . E 3 HOH A 37 337 171 HOH HOH . E 3 HOH A 38 338 67 HOH HOH . E 3 HOH A 39 339 57 HOH HOH . E 3 HOH A 40 340 94 HOH HOH . E 3 HOH A 41 341 112 HOH HOH . E 3 HOH A 42 342 1 HOH HOH . E 3 HOH A 43 343 72 HOH HOH . E 3 HOH A 44 344 123 HOH HOH . E 3 HOH A 45 345 175 HOH HOH . E 3 HOH A 46 346 70 HOH HOH . E 3 HOH A 47 347 45 HOH HOH . E 3 HOH A 48 348 120 HOH HOH . E 3 HOH A 49 349 26 HOH HOH . E 3 HOH A 50 350 15 HOH HOH . E 3 HOH A 51 351 71 HOH HOH . E 3 HOH A 52 352 159 HOH HOH . E 3 HOH A 53 353 91 HOH HOH . E 3 HOH A 54 354 4 HOH HOH . E 3 HOH A 55 355 32 HOH HOH . E 3 HOH A 56 356 58 HOH HOH . E 3 HOH A 57 357 17 HOH HOH . E 3 HOH A 58 358 19 HOH HOH . E 3 HOH A 59 359 172 HOH HOH . E 3 HOH A 60 360 42 HOH HOH . E 3 HOH A 61 361 122 HOH HOH . E 3 HOH A 62 362 98 HOH HOH . E 3 HOH A 63 363 33 HOH HOH . E 3 HOH A 64 364 105 HOH HOH . E 3 HOH A 65 365 154 HOH HOH . E 3 HOH A 66 366 9 HOH HOH . E 3 HOH A 67 367 152 HOH HOH . E 3 HOH A 68 368 69 HOH HOH . E 3 HOH A 69 369 109 HOH HOH . E 3 HOH A 70 370 118 HOH HOH . E 3 HOH A 71 371 179 HOH HOH . E 3 HOH A 72 372 7 HOH HOH . E 3 HOH A 73 373 62 HOH HOH . E 3 HOH A 74 374 117 HOH HOH . E 3 HOH A 75 375 174 HOH HOH . E 3 HOH A 76 376 131 HOH HOH . E 3 HOH A 77 377 138 HOH HOH . E 3 HOH A 78 378 180 HOH HOH . E 3 HOH A 79 379 79 HOH HOH . E 3 HOH A 80 380 143 HOH HOH . E 3 HOH A 81 381 96 HOH HOH . E 3 HOH A 82 382 95 HOH HOH . E 3 HOH A 83 383 144 HOH HOH . E 3 HOH A 84 384 189 HOH HOH . E 3 HOH A 85 385 85 HOH HOH . E 3 HOH A 86 386 59 HOH HOH . E 3 HOH A 87 387 103 HOH HOH . F 3 HOH B 1 301 166 HOH HOH . F 3 HOH B 2 302 160 HOH HOH . F 3 HOH B 3 303 47 HOH HOH . F 3 HOH B 4 304 193 HOH HOH . F 3 HOH B 5 305 44 HOH HOH . F 3 HOH B 6 306 188 HOH HOH . F 3 HOH B 7 307 41 HOH HOH . F 3 HOH B 8 308 88 HOH HOH . F 3 HOH B 9 309 35 HOH HOH . F 3 HOH B 10 310 130 HOH HOH . F 3 HOH B 11 311 23 HOH HOH . F 3 HOH B 12 312 77 HOH HOH . F 3 HOH B 13 313 5 HOH HOH . F 3 HOH B 14 314 165 HOH HOH . F 3 HOH B 15 315 114 HOH HOH . F 3 HOH B 16 316 126 HOH HOH . F 3 HOH B 17 317 83 HOH HOH . F 3 HOH B 18 318 55 HOH HOH . F 3 HOH B 19 319 181 HOH HOH . F 3 HOH B 20 320 119 HOH HOH . F 3 HOH B 21 321 49 HOH HOH . F 3 HOH B 22 322 106 HOH HOH . F 3 HOH B 23 323 64 HOH HOH . F 3 HOH B 24 324 151 HOH HOH . F 3 HOH B 25 325 10 HOH HOH . F 3 HOH B 26 326 186 HOH HOH . F 3 HOH B 27 327 29 HOH HOH . F 3 HOH B 28 328 81 HOH HOH . F 3 HOH B 29 329 43 HOH HOH . F 3 HOH B 30 330 36 HOH HOH . F 3 HOH B 31 331 86 HOH HOH . F 3 HOH B 32 332 142 HOH HOH . F 3 HOH B 33 333 11 HOH HOH . F 3 HOH B 34 334 50 HOH HOH . F 3 HOH B 35 335 80 HOH HOH . F 3 HOH B 36 336 133 HOH HOH . F 3 HOH B 37 337 134 HOH HOH . F 3 HOH B 38 338 161 HOH HOH . F 3 HOH B 39 339 84 HOH HOH . F 3 HOH B 40 340 124 HOH HOH . F 3 HOH B 41 341 97 HOH HOH . F 3 HOH B 42 342 25 HOH HOH . F 3 HOH B 43 343 93 HOH HOH . F 3 HOH B 44 344 28 HOH HOH . F 3 HOH B 45 345 52 HOH HOH . F 3 HOH B 46 346 31 HOH HOH . F 3 HOH B 47 347 2 HOH HOH . F 3 HOH B 48 348 99 HOH HOH . F 3 HOH B 49 349 34 HOH HOH . F 3 HOH B 50 350 102 HOH HOH . F 3 HOH B 51 351 54 HOH HOH . F 3 HOH B 52 352 177 HOH HOH . F 3 HOH B 53 353 149 HOH HOH . F 3 HOH B 54 354 27 HOH HOH . F 3 HOH B 55 355 167 HOH HOH . F 3 HOH B 56 356 163 HOH HOH . F 3 HOH B 57 357 82 HOH HOH . F 3 HOH B 58 358 68 HOH HOH . F 3 HOH B 59 359 21 HOH HOH . F 3 HOH B 60 360 65 HOH HOH . F 3 HOH B 61 361 30 HOH HOH . F 3 HOH B 62 362 3 HOH HOH . F 3 HOH B 63 363 60 HOH HOH . F 3 HOH B 64 364 37 HOH HOH . F 3 HOH B 65 365 127 HOH HOH . F 3 HOH B 66 366 53 HOH HOH . F 3 HOH B 67 367 40 HOH HOH . F 3 HOH B 68 368 48 HOH HOH . F 3 HOH B 69 369 132 HOH HOH . F 3 HOH B 70 370 18 HOH HOH . F 3 HOH B 71 371 183 HOH HOH . F 3 HOH B 72 372 110 HOH HOH . F 3 HOH B 73 373 121 HOH HOH . F 3 HOH B 74 374 108 HOH HOH . F 3 HOH B 75 375 141 HOH HOH . F 3 HOH B 76 376 13 HOH HOH . F 3 HOH B 77 377 22 HOH HOH . F 3 HOH B 78 378 145 HOH HOH . F 3 HOH B 79 379 150 HOH HOH . F 3 HOH B 80 380 135 HOH HOH . F 3 HOH B 81 381 107 HOH HOH . F 3 HOH B 82 382 140 HOH HOH . F 3 HOH B 83 383 148 HOH HOH . F 3 HOH B 84 384 74 HOH HOH . F 3 HOH B 85 385 14 HOH HOH . F 3 HOH B 86 386 162 HOH HOH . F 3 HOH B 87 387 169 HOH HOH . F 3 HOH B 88 388 89 HOH HOH . F 3 HOH B 89 389 184 HOH HOH . F 3 HOH B 90 390 129 HOH HOH . F 3 HOH B 91 391 128 HOH HOH . F 3 HOH B 92 392 63 HOH HOH . F 3 HOH B 93 393 76 HOH HOH . F 3 HOH B 94 394 100 HOH HOH . F 3 HOH B 95 395 147 HOH HOH . F 3 HOH B 96 396 111 HOH HOH . F 3 HOH B 97 397 146 HOH HOH . F 3 HOH B 98 398 192 HOH HOH . F 3 HOH B 99 399 137 HOH HOH . F 3 HOH B 100 400 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . D 2 -15.525 -13.902 -15.377 1 23.87 ? C FMT 201 B 1 HETATM 2 O O1 FMT . . . D 2 -15.534 -14.93 -16.036 1 24.05 ? O1 FMT 201 B 1 HETATM 3 O O2 FMT . . . D 2 -16.646 -13.474 -14.82 1 24.75 ? O2 FMT 201 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #