data_4YYZ # _model_server_result.job_id YPnQRdcCi1rm7UYtBZs1bg _model_server_result.datetime_utc '2024-12-22 01:39:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yyz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 4YYZ # _exptl.entry_id 4YYZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.419 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(1R,2s,3S,5s,7s)-5-hydroxytricyclo[3.3.1.1~3,7~]dec-2-yl]-5,7-dimethylpyrazolo[1,5-a]pyrimidine-3-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4YYZ _cell.length_a 107.788 _cell.length_b 107.788 _cell.length_c 136.02 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YYZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C19 H24 N4 O2' _chem_comp.formula_weight 340.419 _chem_comp.id 4JX _chem_comp.mon_nstd_flag . _chem_comp.name N-[(1R,2s,3S,5s,7s)-5-hydroxytricyclo[3.3.1.1~3,7~]dec-2-yl]-5,7-dimethylpyrazolo[1,5-a]pyrimidine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O12 C11 4JX doub 1 n n O24 C21 4JX sing 2 n n C23 C21 4JX sing 3 n n C23 C15 4JX sing 4 n n C20 C21 4JX sing 5 n n C20 C19 4JX sing 6 n n C14 C15 4JX sing 7 n n C14 N13 4JX sing 8 n n C14 C19 4JX sing 9 n n C21 C22 4JX sing 10 n n C15 C16 4JX sing 11 n n C11 N13 4JX sing 12 n n C11 C8 4JX sing 13 n n C19 C18 4JX sing 14 n n C9 C8 4JX sing 15 n y C9 N10 4JX doub 16 n y C8 C6 4JX doub 17 n y C22 C17 4JX sing 18 n n C16 C17 4JX sing 19 n n N10 N5 4JX sing 20 n y C6 N7 4JX sing 21 n y C6 N5 4JX sing 22 n y C18 C17 4JX sing 23 n n N7 C2 4JX doub 24 n y N5 C4 4JX sing 25 n y C2 C1 4JX sing 26 n n C2 C3 4JX sing 27 n y C4 C3 4JX doub 28 n y C4 C25 4JX sing 29 n n C1 H12 4JX sing 30 n n C1 H13 4JX sing 31 n n C1 H11 4JX sing 32 n n C3 H3 4JX sing 33 n n C9 H9 4JX sing 34 n n C14 H14 4JX sing 35 n n C15 H15 4JX sing 36 n n C16 H162 4JX sing 37 n n C16 H161 4JX sing 38 n n C19 H19 4JX sing 39 n n C20 H201 4JX sing 40 n n C20 H202 4JX sing 41 n n C22 H222 4JX sing 42 n n C22 H221 4JX sing 43 n n N13 H1 4JX sing 44 n n C17 H17 4JX sing 45 n n C18 H182 4JX sing 46 n n C18 H181 4JX sing 47 n n C23 H232 4JX sing 48 n n C23 H231 4JX sing 49 n n O24 H24 4JX sing 50 n n C25 H251 4JX sing 51 n n C25 H252 4JX sing 52 n n C25 H253 4JX sing 53 n n # _atom_sites.entry_id 4YYZ _atom_sites.fract_transf_matrix[1][1] 0.009277 _atom_sites.fract_transf_matrix[1][2] 0.005356 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010713 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007352 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 301 1 NAP NAP . D 3 4JX A 1 302 1 4JX INH . E 2 NAP B 1 301 1 NAP NAP . F 3 4JX B 1 302 1 4JX INH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4JX . . . F 3 31.185 -37.184 0.734 1 133.55 ? C1 4JX 302 B 1 HETATM 2 C C2 4JX . . . F 3 30.694 -36.571 2.009 1 136.23 ? C2 4JX 302 B 1 HETATM 3 C C3 4JX . . . F 3 29.576 -37.05 2.67 1 139.01 ? C3 4JX 302 B 1 HETATM 4 C C8 4JX . . . F 3 31.267 -33.749 4.192 1 130.33 ? C8 4JX 302 B 1 HETATM 5 C C9 4JX . . . F 3 30.373 -33.62 5.263 1 131.98 ? C9 4JX 302 B 1 HETATM 6 C C11 4JX . . . F 3 32.351 -32.819 3.791 1 122.8 ? C11 4JX 302 B 1 HETATM 7 C C14 4JX . . . F 3 33.743 -32.059 1.936 1 115.58 ? C14 4JX 302 B 1 HETATM 8 C C15 4JX . . . F 3 34.652 -33.078 1.243 1 112.71 ? C15 4JX 302 B 1 HETATM 9 C C16 4JX . . . F 3 33.939 -33.623 0.01 1 109.75 ? C16 4JX 302 B 1 HETATM 10 C C19 4JX . . . F 3 33.41 -30.908 0.984 1 116.31 ? C19 4JX 302 B 1 HETATM 11 C C20 4JX . . . F 3 34.71 -30.221 0.557 1 117.83 ? C20 4JX 302 B 1 HETATM 12 C C21 4JX . . . F 3 35.627 -31.227 -0.142 1 116.47 ? C21 4JX 302 B 1 HETATM 13 C C22 4JX . . . F 3 34.915 -31.778 -1.371 1 115.9 ? C22 4JX 302 B 1 HETATM 14 C C4 4JX . . . F 3 29.082 -36.445 3.801 1 137.57 ? C4 4JX 302 B 1 HETATM 15 N N5 4JX . . . F 3 29.755 -35.354 4.24 1 134.04 ? N5 4JX 302 B 1 HETATM 16 C C6 4JX . . . F 3 30.857 -34.909 3.548 1 134.16 ? C6 4JX 302 B 1 HETATM 17 N N7 4JX . . . F 3 31.357 -35.494 2.452 1 137 ? N7 4JX 302 B 1 HETATM 18 N N10 4JX . . . F 3 29.441 -34.577 5.303 1 132.78 ? N10 4JX 302 B 1 HETATM 19 O O12 4JX . . . F 3 32.984 -32.198 4.635 1 121.91 ? O12 4JX 302 B 1 HETATM 20 N N13 4JX . . . F 3 32.544 -32.673 2.478 1 116.85 ? N13 4JX 302 B 1 HETATM 21 C C17 4JX . . . F 3 33.612 -32.473 -0.947 1 113.42 ? C17 4JX 302 B 1 HETATM 22 C C18 4JX . . . F 3 32.706 -31.458 -0.253 1 113 ? C18 4JX 302 B 1 HETATM 23 C C23 4JX . . . F 3 35.947 -32.383 0.81 1 115.28 ? C23 4JX 302 B 1 HETATM 24 O O24 4JX . . . F 3 36.824 -30.58 -0.622 1 115.25 ? O24 4JX 302 B 1 HETATM 25 C C25 4JX . . . F 3 27.839 -36.907 4.488 1 139.05 ? C25 4JX 302 B 1 HETATM 26 H H12 4JX . . . F 3 32.273 -37.177 0.702 1 133.51 ? H12 4JX 302 B 1 HETATM 27 H H13 4JX . . . F 3 30.833 -36.637 -0.14 1 133.18 ? H13 4JX 302 B 1 HETATM 28 H H11 4JX . . . F 3 30.873 -38.221 0.626 1 133.63 ? H11 4JX 302 B 1 HETATM 29 H H3 4JX . . . F 3 29.061 -37.929 2.288 1 140.11 ? H3 4JX 302 B 1 HETATM 30 H H9 4JX . . . F 3 30.415 -32.865 6.043 1 132.52 ? H9 4JX 302 B 1 HETATM 31 H H14 4JX . . . F 3 34.336 -31.632 2.742 1 116.13 ? H14 4JX 302 B 1 HETATM 32 H H15 4JX . . . F 3 34.881 -33.893 1.927 1 112.42 ? H15 4JX 302 B 1 HETATM 33 H H162 4JX . . . F 3 34.586 -34.346 -0.483 1 108.57 ? H162 4JX 302 B 1 HETATM 34 H H161 4JX . . . F 3 33.055 -34.2 0.273 1 109.59 ? H161 4JX 302 B 1 HETATM 35 H H19 4JX . . . F 3 32.763 -30.191 1.486 1 116.7 ? H19 4JX 302 B 1 HETATM 36 H H201 4JX . . . F 3 35.21 -29.77 1.413 1 118.28 ? H201 4JX 302 B 1 HETATM 37 H H202 4JX . . . F 3 34.474 -29.379 -0.093 1 117.83 ? H202 4JX 302 B 1 HETATM 38 H H222 4JX . . . F 3 35.572 -32.467 -1.901 1 116.3 ? H222 4JX 302 B 1 HETATM 39 H H221 4JX . . . F 3 34.69 -30.986 -2.084 1 115.96 ? H221 4JX 302 B 1 HETATM 40 H H1 4JX . . . F 3 31.83 -32.948 1.812 1 116.55 ? H1 4JX 302 B 1 HETATM 41 H H17 4JX . . . F 3 33.09 -32.864 -1.819 1 113.97 ? H17 4JX 302 B 1 HETATM 42 H H182 4JX . . . F 3 32.528 -30.619 -0.923 1 112.3 ? H182 4JX 302 B 1 HETATM 43 H H181 4JX . . . F 3 31.712 -31.852 -0.05 1 112.9 ? H181 4JX 302 B 1 HETATM 44 H H232 4JX . . . F 3 36.517 -32.032 1.669 1 115.06 ? H232 4JX 302 B 1 HETATM 45 H H231 4JX . . . F 3 36.611 -33.098 0.326 1 115.25 ? H231 4JX 302 B 1 HETATM 46 H H24 4JX . . . F 3 36.553 -29.813 -1.19 1 114.77 ? H24 4JX 302 B 1 HETATM 47 H H251 4JX . . . F 3 27.17 -36.1 4.785 1 139.15 ? H251 4JX 302 B 1 HETATM 48 H H252 4JX . . . F 3 28.095 -37.466 5.386 1 139.11 ? H252 4JX 302 B 1 HETATM 49 H H253 4JX . . . F 3 27.271 -37.577 3.843 1 139.21 ? H253 4JX 302 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 49 #