data_4YZ7 # _model_server_result.job_id WObIrEL6huQRrAALVCEzhA _model_server_result.datetime_utc '2024-12-02 23:28:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4yz7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 4YZ7 # _exptl.entry_id 4YZ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 354.436 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4YZ7 _cell.length_a 68.317 _cell.length_b 70.931 _cell.length_c 44.048 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YZ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 28 A CYS 28 1_555 A SG CYS 44 A CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf3 A SG CYS 43 A CYS 43 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf4 A SG CYS 49 A CYS 49 1_555 A SG CYS 121 A CYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 A SG CYS 50 A CYS 50 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf6 A SG CYS 57 A CYS 57 1_555 A SG CYS 81 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 A SG CYS 75 A CYS 75 1_555 A SG CYS 86 A CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf8 B SG CYS 26 B CYS 26 1_555 B SG CYS 115 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 B SG CYS 28 B CYS 28 1_555 B SG CYS 44 B CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 B SG CYS 43 B CYS 43 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf11 B SG CYS 49 B CYS 49 1_555 B SG CYS 121 B CYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf12 B SG CYS 50 B CYS 50 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf13 B SG CYS 57 B CYS 57 1_555 B SG CYS 81 B CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf14 B SG CYS 75 B CYS 75 1_555 B SG CYS 86 B CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C16 H34 O8' _chem_comp.formula_weight 354.436 _chem_comp.id PE4 _chem_comp.mon_nstd_flag . _chem_comp.name 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG4000' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PE4 sing 277 n n O1 HO1 PE4 sing 278 n n C1 C2 PE4 sing 279 n n C1 H11 PE4 sing 280 n n C1 H12 PE4 sing 281 n n C2 O2 PE4 sing 282 n n C2 H21 PE4 sing 283 n n C2 H22 PE4 sing 284 n n O2 C3 PE4 sing 285 n n C3 C4 PE4 sing 286 n n C3 H31 PE4 sing 287 n n C3 H32 PE4 sing 288 n n C4 O3 PE4 sing 289 n n C4 H41 PE4 sing 290 n n C4 H42 PE4 sing 291 n n O3 C5 PE4 sing 292 n n C5 C6 PE4 sing 293 n n C5 H51 PE4 sing 294 n n C5 H52 PE4 sing 295 n n C6 O4 PE4 sing 296 n n C6 H61 PE4 sing 297 n n C6 H62 PE4 sing 298 n n O4 C7 PE4 sing 299 n n C7 C8 PE4 sing 300 n n C7 H71 PE4 sing 301 n n C7 H72 PE4 sing 302 n n C8 O5 PE4 sing 303 n n C8 H81 PE4 sing 304 n n C8 H82 PE4 sing 305 n n O5 C9 PE4 sing 306 n n C9 C10 PE4 sing 307 n n C9 H91 PE4 sing 308 n n C9 H92 PE4 sing 309 n n C10 O6 PE4 sing 310 n n C10 H101 PE4 sing 311 n n C10 H102 PE4 sing 312 n n O6 C11 PE4 sing 313 n n C11 C12 PE4 sing 314 n n C11 H111 PE4 sing 315 n n C11 H112 PE4 sing 316 n n C12 O7 PE4 sing 317 n n C12 H121 PE4 sing 318 n n C12 H122 PE4 sing 319 n n O7 C13 PE4 sing 320 n n C13 C14 PE4 sing 321 n n C13 H131 PE4 sing 322 n n C13 H132 PE4 sing 323 n n C14 O8 PE4 sing 324 n n C14 H141 PE4 sing 325 n n C14 H142 PE4 sing 326 n n O8 C15 PE4 sing 327 n n C15 C16 PE4 sing 328 n n C15 H151 PE4 sing 329 n n C15 H152 PE4 sing 330 n n C16 H161 PE4 sing 331 n n C16 H162 PE4 sing 332 n n C16 H163 PE4 sing 333 n n # _atom_sites.entry_id 4YZ7 _atom_sites.fract_transf_matrix[1][1] 0.014638 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014098 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022703 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 201 4 SO4 SO4 . D 2 SO4 A 1 202 5 SO4 SO4 . E 3 PE4 B 1 201 1 PE4 PE4 . F 4 9AR B 1 202 1 9AR 9AR . G 2 SO4 B 1 203 1 SO4 SO4 . H 2 SO4 B 1 204 2 SO4 SO4 . I 2 SO4 B 1 205 3 SO4 SO4 . J 5 HOH A 1 301 77 HOH HOH . J 5 HOH A 2 302 148 HOH HOH . J 5 HOH A 3 303 133 HOH HOH . J 5 HOH A 4 304 141 HOH HOH . J 5 HOH A 5 305 145 HOH HOH . J 5 HOH A 6 306 154 HOH HOH . J 5 HOH A 7 307 2 HOH HOH . J 5 HOH A 8 308 98 HOH HOH . J 5 HOH A 9 309 52 HOH HOH . J 5 HOH A 10 310 110 HOH HOH . J 5 HOH A 11 311 122 HOH HOH . J 5 HOH A 12 312 83 HOH HOH . J 5 HOH A 13 313 63 HOH HOH . J 5 HOH A 14 314 20 HOH HOH . J 5 HOH A 15 315 82 HOH HOH . J 5 HOH A 16 316 78 HOH HOH . J 5 HOH A 17 317 115 HOH HOH . J 5 HOH A 18 318 8 HOH HOH . J 5 HOH A 19 319 10 HOH HOH . J 5 HOH A 20 320 60 HOH HOH . J 5 HOH A 21 321 80 HOH HOH . J 5 HOH A 22 322 43 HOH HOH . J 5 HOH A 23 323 55 HOH HOH . J 5 HOH A 24 324 7 HOH HOH . J 5 HOH A 25 325 18 HOH HOH . J 5 HOH A 26 326 136 HOH HOH . J 5 HOH A 27 327 3 HOH HOH . J 5 HOH A 28 328 105 HOH HOH . J 5 HOH A 29 329 33 HOH HOH . J 5 HOH A 30 330 107 HOH HOH . J 5 HOH A 31 331 139 HOH HOH . J 5 HOH A 32 332 23 HOH HOH . J 5 HOH A 33 333 27 HOH HOH . J 5 HOH A 34 334 28 HOH HOH . J 5 HOH A 35 335 75 HOH HOH . J 5 HOH A 36 336 174 HOH HOH . J 5 HOH A 37 337 1 HOH HOH . J 5 HOH A 38 338 37 HOH HOH . J 5 HOH A 39 339 88 HOH HOH . J 5 HOH A 40 340 57 HOH HOH . J 5 HOH A 41 341 15 HOH HOH . J 5 HOH A 42 342 76 HOH HOH . J 5 HOH A 43 343 69 HOH HOH . J 5 HOH A 44 344 167 HOH HOH . J 5 HOH A 45 345 6 HOH HOH . J 5 HOH A 46 346 25 HOH HOH . J 5 HOH A 47 347 130 HOH HOH . J 5 HOH A 48 348 29 HOH HOH . J 5 HOH A 49 349 116 HOH HOH . J 5 HOH A 50 350 166 HOH HOH . J 5 HOH A 51 351 42 HOH HOH . J 5 HOH A 52 352 144 HOH HOH . J 5 HOH A 53 353 173 HOH HOH . J 5 HOH A 54 354 89 HOH HOH . J 5 HOH A 55 355 38 HOH HOH . J 5 HOH A 56 356 118 HOH HOH . J 5 HOH A 57 357 90 HOH HOH . J 5 HOH A 58 358 159 HOH HOH . J 5 HOH A 59 359 91 HOH HOH . J 5 HOH A 60 360 142 HOH HOH . J 5 HOH A 61 361 165 HOH HOH . J 5 HOH A 62 362 64 HOH HOH . J 5 HOH A 63 363 95 HOH HOH . J 5 HOH A 64 364 65 HOH HOH . J 5 HOH A 65 365 132 HOH HOH . J 5 HOH A 66 366 100 HOH HOH . J 5 HOH A 67 367 171 HOH HOH . J 5 HOH A 68 368 168 HOH HOH . J 5 HOH A 69 369 40 HOH HOH . J 5 HOH A 70 370 170 HOH HOH . J 5 HOH A 71 371 125 HOH HOH . J 5 HOH A 72 372 39 HOH HOH . J 5 HOH A 73 373 153 HOH HOH . J 5 HOH A 74 374 67 HOH HOH . J 5 HOH A 75 375 114 HOH HOH . J 5 HOH A 76 376 157 HOH HOH . J 5 HOH A 77 377 146 HOH HOH . J 5 HOH A 78 378 66 HOH HOH . J 5 HOH A 79 379 137 HOH HOH . J 5 HOH A 80 380 44 HOH HOH . J 5 HOH A 81 381 121 HOH HOH . J 5 HOH A 82 382 120 HOH HOH . K 5 HOH B 1 301 5 HOH HOH . K 5 HOH B 2 302 123 HOH HOH . K 5 HOH B 3 303 61 HOH HOH . K 5 HOH B 4 304 160 HOH HOH . K 5 HOH B 5 305 129 HOH HOH . K 5 HOH B 6 306 11 HOH HOH . K 5 HOH B 7 307 94 HOH HOH . K 5 HOH B 8 308 79 HOH HOH . K 5 HOH B 9 309 50 HOH HOH . K 5 HOH B 10 310 46 HOH HOH . K 5 HOH B 11 311 16 HOH HOH . K 5 HOH B 12 312 102 HOH HOH . K 5 HOH B 13 313 48 HOH HOH . K 5 HOH B 14 314 17 HOH HOH . K 5 HOH B 15 315 34 HOH HOH . K 5 HOH B 16 316 26 HOH HOH . K 5 HOH B 17 317 14 HOH HOH . K 5 HOH B 18 318 9 HOH HOH . K 5 HOH B 19 319 103 HOH HOH . K 5 HOH B 20 320 45 HOH HOH . K 5 HOH B 21 321 59 HOH HOH . K 5 HOH B 22 322 85 HOH HOH . K 5 HOH B 23 323 19 HOH HOH . K 5 HOH B 24 324 74 HOH HOH . K 5 HOH B 25 325 54 HOH HOH . K 5 HOH B 26 326 13 HOH HOH . K 5 HOH B 27 327 51 HOH HOH . K 5 HOH B 28 328 152 HOH HOH . K 5 HOH B 29 329 71 HOH HOH . K 5 HOH B 30 330 53 HOH HOH . K 5 HOH B 31 331 68 HOH HOH . K 5 HOH B 32 332 24 HOH HOH . K 5 HOH B 33 333 56 HOH HOH . K 5 HOH B 34 334 128 HOH HOH . K 5 HOH B 35 335 4 HOH HOH . K 5 HOH B 36 336 96 HOH HOH . K 5 HOH B 37 337 93 HOH HOH . K 5 HOH B 38 338 72 HOH HOH . K 5 HOH B 39 339 155 HOH HOH . K 5 HOH B 40 340 36 HOH HOH . K 5 HOH B 41 341 140 HOH HOH . K 5 HOH B 42 342 86 HOH HOH . K 5 HOH B 43 343 12 HOH HOH . K 5 HOH B 44 344 62 HOH HOH . K 5 HOH B 45 345 149 HOH HOH . K 5 HOH B 46 346 101 HOH HOH . K 5 HOH B 47 347 84 HOH HOH . K 5 HOH B 48 348 58 HOH HOH . K 5 HOH B 49 349 32 HOH HOH . K 5 HOH B 50 350 73 HOH HOH . K 5 HOH B 51 351 87 HOH HOH . K 5 HOH B 52 352 22 HOH HOH . K 5 HOH B 53 353 21 HOH HOH . K 5 HOH B 54 354 99 HOH HOH . K 5 HOH B 55 355 31 HOH HOH . K 5 HOH B 56 356 81 HOH HOH . K 5 HOH B 57 357 131 HOH HOH . K 5 HOH B 58 358 163 HOH HOH . K 5 HOH B 59 359 112 HOH HOH . K 5 HOH B 60 360 169 HOH HOH . K 5 HOH B 61 361 127 HOH HOH . K 5 HOH B 62 362 92 HOH HOH . K 5 HOH B 63 363 138 HOH HOH . K 5 HOH B 64 364 70 HOH HOH . K 5 HOH B 65 365 109 HOH HOH . K 5 HOH B 66 366 164 HOH HOH . K 5 HOH B 67 367 47 HOH HOH . K 5 HOH B 68 368 124 HOH HOH . K 5 HOH B 69 369 143 HOH HOH . K 5 HOH B 70 370 104 HOH HOH . K 5 HOH B 71 371 35 HOH HOH . K 5 HOH B 72 372 135 HOH HOH . K 5 HOH B 73 373 156 HOH HOH . K 5 HOH B 74 374 158 HOH HOH . K 5 HOH B 75 375 161 HOH HOH . K 5 HOH B 76 376 108 HOH HOH . K 5 HOH B 77 377 30 HOH HOH . K 5 HOH B 78 378 134 HOH HOH . K 5 HOH B 79 379 49 HOH HOH . K 5 HOH B 80 380 97 HOH HOH . K 5 HOH B 81 381 150 HOH HOH . K 5 HOH B 82 382 106 HOH HOH . K 5 HOH B 83 383 151 HOH HOH . K 5 HOH B 84 384 147 HOH HOH . K 5 HOH B 85 385 41 HOH HOH . K 5 HOH B 86 386 117 HOH HOH . K 5 HOH B 87 387 162 HOH HOH . K 5 HOH B 88 388 113 HOH HOH . K 5 HOH B 89 389 111 HOH HOH . K 5 HOH B 90 390 172 HOH HOH . K 5 HOH B 91 391 126 HOH HOH . K 5 HOH B 92 392 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PE4 . . . E 3 17.049 10.046 -2.229 1 40.72 ? O1 PE4 201 B 1 HETATM 2 C C1 PE4 . . . E 3 17.44 8.74 -1.754 1 51.56 ? C1 PE4 201 B 1 HETATM 3 C C2 PE4 . . . E 3 16.872 8.5 -0.364 1 61.25 ? C2 PE4 201 B 1 HETATM 4 O O2 PE4 . . . E 3 16.025 7.359 -0.381 1 81.75 ? O2 PE4 201 B 1 HETATM 5 C C3 PE4 . . . E 3 15.808 6.723 0.926 1 62.35 ? C3 PE4 201 B 1 HETATM 6 C C4 PE4 . . . E 3 14.342 6.146 1.02 1 47.38 ? C4 PE4 201 B 1 HETATM 7 O O3 PE4 . . . E 3 14.012 5.949 2.368 1 52.04 ? O3 PE4 201 B 1 HETATM 8 C C5 PE4 . . . E 3 12.617 6.088 2.673 1 44.02 ? C5 PE4 201 B 1 HETATM 9 C C6 PE4 . . . E 3 12.423 5.836 4.147 1 49.66 ? C6 PE4 201 B 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #