data_4Z1V # _model_server_result.job_id mUuM46AlrC08ygaEBkZGOQ _model_server_result.datetime_utc '2025-09-24 13:25:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4z1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 4Z1V # _exptl.entry_id 4Z1V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Z1V _cell.length_a 86.65 _cell.length_b 86.65 _cell.length_c 147.73 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 202 A HIS 199 1_555 E FE FE . A FE 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc2 A OD2 ASP 204 A ASP 201 1_555 E FE FE . A FE 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc3 A NE2 HIS 282 A HIS 279 1_555 E FE FE . A FE 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc4 B O2 OGA . A OGA 601 1_555 E FE FE . A FE 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc5 B O2' OGA . A OGA 601 1_555 E FE FE . A FE 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc6 C N NO . A NO 602 1_555 E FE FE . A FE 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.829 ? metalc ? metalc7 C O NO . A NO 602 1_555 E FE FE . A FE 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 252 n n C1 C2 PEG sing 253 n n C1 H11 PEG sing 254 n n C1 H12 PEG sing 255 n n O1 HO1 PEG sing 256 n n C2 O2 PEG sing 257 n n C2 H21 PEG sing 258 n n C2 H22 PEG sing 259 n n O2 C3 PEG sing 260 n n C3 C4 PEG sing 261 n n C3 H31 PEG sing 262 n n C3 H32 PEG sing 263 n n C4 O4 PEG sing 264 n n C4 H41 PEG sing 265 n n C4 H42 PEG sing 266 n n O4 HO4 PEG sing 267 n n # _atom_sites.entry_id 4Z1V _atom_sites.fract_transf_matrix[1][1] 0.011541 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011541 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006769 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OGA A 1 601 601 OGA OGA . C 3 NO A 1 602 602 NO NO . D 4 PEG A 1 603 603 PEG PEG . E 5 FE A 1 604 604 FE FE . F 6 SO4 A 1 605 605 SO4 SO4 . G 6 SO4 A 1 606 606 SO4 SO4 . H 6 SO4 A 1 607 607 SO4 SO4 . I 6 SO4 A 1 608 608 SO4 SO4 . J 6 SO4 A 1 609 609 SO4 SO4 . K 7 HOH A 1 701 701 HOH HOH . K 7 HOH A 2 702 739 HOH HOH . K 7 HOH A 3 703 706 HOH HOH . K 7 HOH A 4 704 718 HOH HOH . K 7 HOH A 5 705 708 HOH HOH . K 7 HOH A 6 706 707 HOH HOH . K 7 HOH A 7 707 703 HOH HOH . K 7 HOH A 8 708 725 HOH HOH . K 7 HOH A 9 709 722 HOH HOH . K 7 HOH A 10 710 9 HOH HOH . K 7 HOH A 11 711 705 HOH HOH . K 7 HOH A 12 712 711 HOH HOH . K 7 HOH A 13 713 710 HOH HOH . K 7 HOH A 14 714 724 HOH HOH . K 7 HOH A 15 715 712 HOH HOH . K 7 HOH A 16 716 709 HOH HOH . K 7 HOH A 17 717 702 HOH HOH . K 7 HOH A 18 718 704 HOH HOH . K 7 HOH A 19 719 716 HOH HOH . K 7 HOH A 20 720 715 HOH HOH . K 7 HOH A 21 721 732 HOH HOH . K 7 HOH A 22 722 714 HOH HOH . K 7 HOH A 23 723 726 HOH HOH . K 7 HOH A 24 724 11 HOH HOH . K 7 HOH A 25 725 720 HOH HOH . K 7 HOH A 26 726 721 HOH HOH . K 7 HOH A 27 727 713 HOH HOH . K 7 HOH A 28 728 719 HOH HOH . K 7 HOH A 29 729 731 HOH HOH . K 7 HOH A 30 730 727 HOH HOH . K 7 HOH A 31 731 742 HOH HOH . K 7 HOH A 32 732 735 HOH HOH . K 7 HOH A 33 733 733 HOH HOH . K 7 HOH A 34 734 717 HOH HOH . K 7 HOH A 35 735 730 HOH HOH . K 7 HOH A 36 736 728 HOH HOH . K 7 HOH A 37 737 734 HOH HOH . K 7 HOH A 38 738 729 HOH HOH . K 7 HOH A 39 739 8 HOH HOH . K 7 HOH A 40 740 743 HOH HOH . K 7 HOH A 41 741 736 HOH HOH . K 7 HOH A 42 742 737 HOH HOH . K 7 HOH A 43 743 744 HOH HOH . K 7 HOH A 44 744 738 HOH HOH . K 7 HOH A 45 745 757 HOH HOH . K 7 HOH A 46 746 745 HOH HOH . K 7 HOH A 47 747 752 HOH HOH . K 7 HOH A 48 748 747 HOH HOH . K 7 HOH A 49 749 746 HOH HOH . K 7 HOH A 50 750 723 HOH HOH . K 7 HOH A 51 751 741 HOH HOH . K 7 HOH A 52 752 750 HOH HOH . K 7 HOH A 53 753 754 HOH HOH . K 7 HOH A 54 754 749 HOH HOH . K 7 HOH A 55 755 2 HOH HOH . K 7 HOH A 56 756 740 HOH HOH . K 7 HOH A 57 757 755 HOH HOH . K 7 HOH A 58 758 758 HOH HOH . K 7 HOH A 59 759 748 HOH HOH . K 7 HOH A 60 760 751 HOH HOH . K 7 HOH A 61 761 753 HOH HOH . K 7 HOH A 62 762 756 HOH HOH . K 7 HOH A 63 763 772 HOH HOH . K 7 HOH A 64 764 765 HOH HOH . K 7 HOH A 65 765 759 HOH HOH . K 7 HOH A 66 766 768 HOH HOH . K 7 HOH A 67 767 761 HOH HOH . K 7 HOH A 68 768 3 HOH HOH . K 7 HOH A 69 769 767 HOH HOH . K 7 HOH A 70 770 764 HOH HOH . K 7 HOH A 71 771 7 HOH HOH . K 7 HOH A 72 772 766 HOH HOH . K 7 HOH A 73 773 762 HOH HOH . K 7 HOH A 74 774 5 HOH HOH . K 7 HOH A 75 775 760 HOH HOH . K 7 HOH A 76 776 770 HOH HOH . K 7 HOH A 77 777 10 HOH HOH . K 7 HOH A 78 778 763 HOH HOH . K 7 HOH A 79 779 769 HOH HOH . K 7 HOH A 80 780 775 HOH HOH . K 7 HOH A 81 781 778 HOH HOH . K 7 HOH A 82 782 781 HOH HOH . K 7 HOH A 83 783 773 HOH HOH . K 7 HOH A 84 784 771 HOH HOH . K 7 HOH A 85 785 776 HOH HOH . K 7 HOH A 86 786 785 HOH HOH . K 7 HOH A 87 787 774 HOH HOH . K 7 HOH A 88 788 779 HOH HOH . K 7 HOH A 89 789 777 HOH HOH . K 7 HOH A 90 790 782 HOH HOH . K 7 HOH A 91 791 780 HOH HOH . K 7 HOH A 92 792 788 HOH HOH . K 7 HOH A 93 793 6 HOH HOH . K 7 HOH A 94 794 784 HOH HOH . K 7 HOH A 95 795 786 HOH HOH . K 7 HOH A 96 796 4 HOH HOH . K 7 HOH A 97 797 787 HOH HOH . K 7 HOH A 98 798 1 HOH HOH . K 7 HOH A 99 799 790 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 4 -17.784 21.943 -4.071 1 66 ? C1 PEG 603 A 1 HETATM 2 O O1 PEG . . . D 4 -18.34 22.961 -4.896 1 66.27 ? O1 PEG 603 A 1 HETATM 3 C C2 PEG . . . D 4 -16.274 22.046 -4.181 1 66.34 ? C2 PEG 603 A 1 HETATM 4 O O2 PEG . . . D 4 -15.602 20.96 -3.538 1 72.66 ? O2 PEG 603 A 1 HETATM 5 C C3 PEG . . . D 4 -14.18 21.155 -3.334 1 65.29 ? C3 PEG 603 A 1 HETATM 6 C C4 PEG . . . D 4 -13.702 20.416 -2.088 1 69.58 ? C4 PEG 603 A 1 HETATM 7 O O4 PEG . . . D 4 -13.721 19.003 -2.307 1 70.01 ? O4 PEG 603 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #