data_4Z2W # _model_server_result.job_id mPMh9CW_7DDUKJizpR06yA _model_server_result.datetime_utc '2024-11-25 06:42:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4z2w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 4Z2W # _exptl.entry_id 4Z2W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Z2W _cell.length_a 86.57 _cell.length_b 86.57 _cell.length_c 147.23 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z2W _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 202 A HIS 199 1_555 D FE FE . A FE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc2 A OD2 ASP 204 A ASP 201 1_555 D FE FE . A FE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc3 A NE2 HIS 282 A HIS 279 1_555 D FE FE . A FE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc4 B O2 AKG . A AKG 401 1_555 D FE FE . A FE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc5 B O5 AKG . A AKG 401 1_555 D FE FE . A FE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc6 D FE FE . A FE 403 1_555 J O HOH . A HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4Z2W _atom_sites.fract_transf_matrix[1][1] 0.011551 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006792 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AKG A 1 401 1351 AKG AKG . C 3 PEG A 1 402 1 PEG PEG . D 4 FE A 1 403 1 FE FE . E 5 SO4 A 1 404 1 SO4 SO4 . F 5 SO4 A 1 405 2 SO4 SO4 . G 5 SO4 A 1 406 4 SO4 SO4 . H 5 SO4 A 1 407 5 SO4 SO4 . I 5 SO4 A 1 408 6 SO4 SO4 . J 6 HOH A 1 501 57 HOH HOH . J 6 HOH A 2 502 41 HOH HOH . J 6 HOH A 3 503 48 HOH HOH . J 6 HOH A 4 504 67 HOH HOH . J 6 HOH A 5 505 65 HOH HOH . J 6 HOH A 6 506 73 HOH HOH . J 6 HOH A 7 507 60 HOH HOH . J 6 HOH A 8 508 13 HOH HOH . J 6 HOH A 9 509 39 HOH HOH . J 6 HOH A 10 510 33 HOH HOH . J 6 HOH A 11 511 61 HOH HOH . J 6 HOH A 12 512 19 HOH HOH . J 6 HOH A 13 513 7 HOH HOH . J 6 HOH A 14 514 20 HOH HOH . J 6 HOH A 15 515 14 HOH HOH . J 6 HOH A 16 516 4 HOH HOH . J 6 HOH A 17 517 30 HOH HOH . J 6 HOH A 18 518 43 HOH HOH . J 6 HOH A 19 519 59 HOH HOH . J 6 HOH A 20 520 38 HOH HOH . J 6 HOH A 21 521 5 HOH HOH . J 6 HOH A 22 522 44 HOH HOH . J 6 HOH A 23 523 9 HOH HOH . J 6 HOH A 24 524 55 HOH HOH . J 6 HOH A 25 525 17 HOH HOH . J 6 HOH A 26 526 6 HOH HOH . J 6 HOH A 27 527 58 HOH HOH . J 6 HOH A 28 528 8 HOH HOH . J 6 HOH A 29 529 24 HOH HOH . J 6 HOH A 30 530 53 HOH HOH . J 6 HOH A 31 531 18 HOH HOH . J 6 HOH A 32 532 64 HOH HOH . J 6 HOH A 33 533 72 HOH HOH . J 6 HOH A 34 534 40 HOH HOH . J 6 HOH A 35 535 71 HOH HOH . J 6 HOH A 36 536 46 HOH HOH . J 6 HOH A 37 537 21 HOH HOH . J 6 HOH A 38 538 36 HOH HOH . J 6 HOH A 39 539 29 HOH HOH . J 6 HOH A 40 540 10 HOH HOH . J 6 HOH A 41 541 47 HOH HOH . J 6 HOH A 42 542 15 HOH HOH . J 6 HOH A 43 543 27 HOH HOH . J 6 HOH A 44 544 12 HOH HOH . J 6 HOH A 45 545 16 HOH HOH . J 6 HOH A 46 546 45 HOH HOH . J 6 HOH A 47 547 28 HOH HOH . J 6 HOH A 48 548 52 HOH HOH . J 6 HOH A 49 549 54 HOH HOH . J 6 HOH A 50 550 74 HOH HOH . J 6 HOH A 51 551 50 HOH HOH . J 6 HOH A 52 552 68 HOH HOH . J 6 HOH A 53 553 26 HOH HOH . J 6 HOH A 54 554 22 HOH HOH . J 6 HOH A 55 555 37 HOH HOH . J 6 HOH A 56 556 63 HOH HOH . J 6 HOH A 57 557 62 HOH HOH . J 6 HOH A 58 558 51 HOH HOH . J 6 HOH A 59 559 35 HOH HOH . J 6 HOH A 60 560 70 HOH HOH . J 6 HOH A 61 561 69 HOH HOH . J 6 HOH A 62 562 11 HOH HOH . J 6 HOH A 63 563 34 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -15.604 _atom_site.Cartn_y 19.763 _atom_site.Cartn_z -7.859 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #