data_4Z3C # _model_server_result.job_id pXFa0XsEy8GgUX_nm4BLig _model_server_result.datetime_utc '2025-03-12 20:02:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4z3c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":104}' # _entry.id 4Z3C # _exptl.entry_id 4Z3C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight ? _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'UNKNOWN ATOM OR ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.53 _cell.angle_gamma 90 _cell.entry_id 4Z3C _cell.length_a 27.616 _cell.length_b 54.744 _cell.length_c 40.228 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z3C _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C SG CYS 11 C CYS 57 1_555 E ZN ZN . C ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc2 C SG CYS 14 C CYS 60 1_555 E ZN ZN . C ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc3 C SG CYS 17 C CYS 63 1_555 E ZN ZN . C ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc4 C SG CYS 23 C CYS 69 1_555 F ZN ZN . C ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc5 C SG CYS 26 C CYS 72 1_555 F ZN ZN . C ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc6 C SG CYS 29 C CYS 75 1_555 F ZN ZN . C ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc7 C SG CYS 38 C CYS 84 1_555 F ZN ZN . C ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc8 C SG CYS 43 C CYS 89 1_555 E ZN ZN . C ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? hydrog WATSON-CRICK hydrog1 A N1 DG 1 A DG 1 1_555 B N3 DC 12 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 1 A DG 1 1_555 B O2 DC 12 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 1 A DG 1 1_555 B N4 DC 12 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 DC 2 A DC 2 1_555 B N1 DG 11 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 DC 2 A DC 2 1_555 B O6 DG 11 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 DC 2 A DC 2 1_555 B N2 DG 11 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DC 3 A DC 3 1_555 B N1 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 DC 3 A DC 3 1_555 B O6 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 DC 3 A DC 3 1_555 B N2 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DA 4 A DA 4 1_555 B N3 DT 9 B DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N6 DA 4 A DA 4 1_555 B O4 DT 9 B DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 DA 5 A DA 5 1_555 B N3 DT 8 B DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N6 DA 5 A DA 5 1_555 B O4 DT 8 B DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DC 6 A DC 6 1_555 B N1 DG 7 B DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N4 DC 6 A DC 6 1_555 B O6 DG 7 B DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O2 DC 6 A DC 6 1_555 B N2 DG 7 B DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N1 DG 7 A DG 7 1_555 B N3 DC 6 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N2 DG 7 A DG 7 1_555 B O2 DC 6 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A O6 DG 7 A DG 7 1_555 B N4 DC 6 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N3 DT 8 A DT 8 1_555 B N1 DA 5 B DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O4 DT 8 A DT 8 1_555 B N6 DA 5 B DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N3 DT 9 A DT 9 1_555 B N1 DA 4 B DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O4 DT 9 A DT 9 1_555 B N6 DA 4 B DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N1 DG 10 A DG 10 1_555 B N3 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N2 DG 10 A DG 10 1_555 B O2 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O6 DG 10 A DG 10 1_555 B N4 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N1 DG 11 A DG 11 1_555 B N3 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N2 DG 11 A DG 11 1_555 B O2 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A O6 DG 11 A DG 11 1_555 B N4 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A N3 DC 12 A DC 12 1_555 B N1 DG 1 B DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 A N4 DC 12 A DC 12 1_555 B O6 DG 1 B DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 A O2 DC 12 A DC 12 1_555 B N2 DG 1 B DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula ? _chem_comp.formula_weight ? _chem_comp.id UNX _chem_comp.mon_nstd_flag . _chem_comp.name 'UNKNOWN ATOM OR ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4Z3C _atom_sites.fract_transf_matrix[1][1] 0.036211 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008712 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018267 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025568 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 UNX B 1 101 4 UNX UNX . E 4 ZN C 1 101 1 ZN ZN . F 4 ZN C 1 102 2 ZN ZN . G 3 UNX C 1 103 2 UNX UNX . H 3 UNX C 1 104 5 UNX UNX . I 3 UNX C 1 105 6 UNX UNX . J 5 HOH A 1 101 79 HOH HOH . J 5 HOH A 2 102 23 HOH HOH . J 5 HOH A 3 103 49 HOH HOH . J 5 HOH A 4 104 69 HOH HOH . J 5 HOH A 5 105 5 HOH HOH . J 5 HOH A 6 106 45 HOH HOH . J 5 HOH A 7 107 3 HOH HOH . J 5 HOH A 8 108 27 HOH HOH . J 5 HOH A 9 109 2 HOH HOH . J 5 HOH A 10 110 12 HOH HOH . J 5 HOH A 11 111 8 HOH HOH . J 5 HOH A 12 112 44 HOH HOH . J 5 HOH A 13 113 89 HOH HOH . J 5 HOH A 14 114 62 HOH HOH . J 5 HOH A 15 115 74 HOH HOH . J 5 HOH A 16 116 58 HOH HOH . J 5 HOH A 17 117 107 HOH HOH . J 5 HOH A 18 118 57 HOH HOH . J 5 HOH A 19 119 65 HOH HOH . J 5 HOH A 20 120 11 HOH HOH . J 5 HOH A 21 121 78 HOH HOH . J 5 HOH A 22 122 105 HOH HOH . K 5 HOH B 1 201 104 HOH HOH . K 5 HOH B 2 202 99 HOH HOH . K 5 HOH B 3 203 94 HOH HOH . K 5 HOH B 4 204 55 HOH HOH . K 5 HOH B 5 205 52 HOH HOH . K 5 HOH B 6 206 85 HOH HOH . K 5 HOH B 7 207 63 HOH HOH . K 5 HOH B 8 208 30 HOH HOH . K 5 HOH B 9 209 84 HOH HOH . K 5 HOH B 10 210 64 HOH HOH . K 5 HOH B 11 211 51 HOH HOH . K 5 HOH B 12 212 13 HOH HOH . K 5 HOH B 13 213 54 HOH HOH . K 5 HOH B 14 214 50 HOH HOH . K 5 HOH B 15 215 83 HOH HOH . K 5 HOH B 16 216 80 HOH HOH . K 5 HOH B 17 217 97 HOH HOH . K 5 HOH B 18 218 9 HOH HOH . K 5 HOH B 19 219 40 HOH HOH . K 5 HOH B 20 220 87 HOH HOH . L 5 HOH C 1 201 77 HOH HOH . L 5 HOH C 2 202 92 HOH HOH . L 5 HOH C 3 203 96 HOH HOH . L 5 HOH C 4 204 46 HOH HOH . L 5 HOH C 5 205 70 HOH HOH . L 5 HOH C 6 206 32 HOH HOH . L 5 HOH C 7 207 100 HOH HOH . L 5 HOH C 8 208 10 HOH HOH . L 5 HOH C 9 209 31 HOH HOH . L 5 HOH C 10 210 36 HOH HOH . L 5 HOH C 11 211 20 HOH HOH . L 5 HOH C 12 212 1 HOH HOH . L 5 HOH C 13 213 37 HOH HOH . L 5 HOH C 14 214 39 HOH HOH . L 5 HOH C 15 215 67 HOH HOH . L 5 HOH C 16 216 41 HOH HOH . L 5 HOH C 17 217 61 HOH HOH . L 5 HOH C 18 218 88 HOH HOH . L 5 HOH C 19 219 75 HOH HOH . L 5 HOH C 20 220 28 HOH HOH . L 5 HOH C 21 221 76 HOH HOH . L 5 HOH C 22 222 82 HOH HOH . L 5 HOH C 23 223 106 HOH HOH . L 5 HOH C 24 224 53 HOH HOH . L 5 HOH C 25 225 15 HOH HOH . L 5 HOH C 26 226 21 HOH HOH . L 5 HOH C 27 227 56 HOH HOH . L 5 HOH C 28 228 102 HOH HOH . L 5 HOH C 29 229 48 HOH HOH . L 5 HOH C 30 230 95 HOH HOH . L 5 HOH C 31 231 103 HOH HOH . L 5 HOH C 32 232 101 HOH HOH . L 5 HOH C 33 233 71 HOH HOH . L 5 HOH C 34 234 59 HOH HOH . L 5 HOH C 35 235 60 HOH HOH . L 5 HOH C 36 236 90 HOH HOH . L 5 HOH C 37 237 73 HOH HOH . L 5 HOH C 38 238 47 HOH HOH . L 5 HOH C 39 239 93 HOH HOH . L 5 HOH C 40 240 91 HOH HOH . L 5 HOH C 41 241 68 HOH HOH . L 5 HOH C 42 242 66 HOH HOH . L 5 HOH C 43 243 86 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol X _atom_site.label_atom_id UNK _atom_site.label_comp_id UNX _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x -12.601 _atom_site.Cartn_y 3.422 _atom_site.Cartn_z -5.557 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id UNK _atom_site.auth_comp_id UNX _atom_site.auth_seq_id 104 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #