data_4Z4F
#
_model_server_result.job_id            N4-_fTBB1Fb4bCWXPzslNA 
_model_server_result.datetime_utc      '2025-01-20 05:23:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4z4f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":901}' 
#
_entry.id    4Z4F 
#
_exptl.entry_id    4Z4F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.52 
_cell.angle_gamma         90 
_cell.entry_id            4Z4F 
_cell.length_a            55.859 
_cell.length_b            116.591 
_cell.length_c            70.375 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4Z4F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 H N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C O3' A 8 D A 8 1_555 C P N6G 9 D N6G 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.607 ? 
covale ? covale2 C O3' N6G 9 D N6G 9 1_555 C P A 10 D A 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.607 ? 
metalc ? metalc1 A OD1 ASP 597 A ASP 597 1_555 D MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? 
metalc ? metalc2 A O VAL 598 A VAL 598 1_555 D MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc3 D MG MG . A MG 901 1_555 J O HOH . A HOH 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc4 D MG MG . A MG 901 1_555 J O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc5 D MG MG . A MG 901 1_555 J O HOH . A HOH 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc6 D MG MG . A MG 901 1_555 K O HOH . B HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc7 B OP2 A 13 B A 13 1_555 H MG MG . B MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? 
metalc ? metalc8 H MG MG . B MG 101 1_555 K O HOH . B HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc9 H MG MG . B MG 101 1_555 K O HOH . B HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc10 C O4 U 4 D U 4 1_555 I MG MG . D MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc11 I MG MG . D MG 101 1_555 L O HOH . D HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc12 I MG MG . D MG 101 1_555 L O HOH . D HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? 
metalc ? metalc13 I MG MG . D MG 101 1_555 L O HOH . D HOH 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc14 I MG MG . D MG 101 1_555 L O HOH . D HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.984 ? 
metalc ? metalc15 I MG MG . D MG 101 1_555 L O HOH . D HOH 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? 
hydrog WATSON-CRICK hydrog1 B N3 U 2 B U 2 1_555 C N1 A 8 D A 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 B O4 U 2 B U 2 1_555 C N6 A 8 D A 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 B N3 C 3 B C 3 1_555 C N1 G 7 D G 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 B N4 C 3 B C 3 1_555 C O6 G 7 D G 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 B O2 C 3 B C 3 1_555 C N2 G 7 D G 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 B N1 A 4 B A 4 1_555 C N3 U 6 D U 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 B N6 A 4 B A 4 1_555 C O4 U 6 D U 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 B N3 C 5 B C 5 1_555 C N1 G 5 D G 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 B N4 C 5 B C 5 1_555 C O6 G 5 D G 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 B O2 C 5 B C 5 1_555 C N2 G 5 D G 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'A-U PAIR' hydrog11 B N1 A 6 B A 6 1_555 C N3 U 4 D U 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 B N3 U 7 B U 7 1_555 C N1 A 3 D A 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 B O4 U 7 B U 7 1_555 C N6 A 3 D A 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 B N3 U 8 B U 8 1_555 C N1 A 2 D A 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 B O4 U 8 B U 8 1_555 C N6 A 2 D A 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 B N1 G 9 B G 9 1_555 C N3 C 1 D C 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 B N2 G 9 B G 9 1_555 C O2 C 1 D C 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 B O6 G 9 B G 9 1_555 C N4 C 1 D C 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4Z4F 
_atom_sites.fract_transf_matrix[1][1]    0.017902 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000787 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008577 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014223 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 MG A 1 901 1 MG MG . 
E 5 IPH A 1 902 1 IPH IPH . 
F 5 IPH A 1 903 2 IPH IPH . 
G 5 IPH A 1 904 3 IPH IPH . 
H 4 MG B 1 101 3 MG MG . 
I 4 MG D 1 101 2 MG MG . 
J 6 HOH A 1 1001 16 HOH HOH . 
J 6 HOH A 2 1002 2 HOH HOH . 
J 6 HOH A 3 1003 5 HOH HOH . 
J 6 HOH A 4 1004 17 HOH HOH . 
J 6 HOH A 5 1005 3 HOH HOH . 
J 6 HOH A 6 1006 4 HOH HOH . 
J 6 HOH A 7 1007 7 HOH HOH . 
K 6 HOH B 1 201 14 HOH HOH . 
K 6 HOH B 2 202 13 HOH HOH . 
K 6 HOH B 3 203 15 HOH HOH . 
K 6 HOH B 4 204 6 HOH HOH . 
L 6 HOH D 1 201 9 HOH HOH . 
L 6 HOH D 2 202 8 HOH HOH . 
L 6 HOH D 3 203 10 HOH HOH . 
L 6 HOH D 4 204 11 HOH HOH . 
L 6 HOH D 5 205 12 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               61.095 
_atom_site.Cartn_y               -9.099 
_atom_site.Cartn_z               24.461 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        24.85 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           901 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#