data_4Z55
#
_model_server_result.job_id            KF4D01lYh87oT25K2JBFGw 
_model_server_result.datetime_utc      '2025-01-07 07:12:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4z55 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1502}' 
#
_entry.id    4Z55 
#
_exptl.entry_id    4Z55 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4Z55 
_cell.length_a            51.56 
_cell.length_b            57.52 
_cell.length_c            105.42 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4Z55 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 213 n n 
C1 C2 GOL sing 214 n n 
C1 H11 GOL sing 215 n n 
C1 H12 GOL sing 216 n n 
O1 HO1 GOL sing 217 n n 
C2 O2 GOL sing 218 n n 
C2 C3 GOL sing 219 n n 
C2 H2 GOL sing 220 n n 
O2 HO2 GOL sing 221 n n 
C3 O3 GOL sing 222 n n 
C3 H31 GOL sing 223 n n 
C3 H32 GOL sing 224 n n 
O3 HO3 GOL sing 225 n n 
#
_atom_sites.entry_id                     4Z55 
_atom_sites.fract_transf_matrix[1][1]    0.019395 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017385 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009486 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 1501 1 GOL GOL . 
C 2 GOL A 1 1502 2 GOL GOL . 
D 3 4LO A 1 1503 1 4LO LI1 . 
E 4 HOH A 1 1601 38 HOH HOH . 
E 4 HOH A 2 1602 113 HOH HOH . 
E 4 HOH A 3 1603 46 HOH HOH . 
E 4 HOH A 4 1604 89 HOH HOH . 
E 4 HOH A 5 1605 72 HOH HOH . 
E 4 HOH A 6 1606 61 HOH HOH . 
E 4 HOH A 7 1607 100 HOH HOH . 
E 4 HOH A 8 1608 151 HOH HOH . 
E 4 HOH A 9 1609 47 HOH HOH . 
E 4 HOH A 10 1610 19 HOH HOH . 
E 4 HOH A 11 1611 9 HOH HOH . 
E 4 HOH A 12 1612 31 HOH HOH . 
E 4 HOH A 13 1613 24 HOH HOH . 
E 4 HOH A 14 1614 21 HOH HOH . 
E 4 HOH A 15 1615 173 HOH HOH . 
E 4 HOH A 16 1616 159 HOH HOH . 
E 4 HOH A 17 1617 106 HOH HOH . 
E 4 HOH A 18 1618 6 HOH HOH . 
E 4 HOH A 19 1619 17 HOH HOH . 
E 4 HOH A 20 1620 7 HOH HOH . 
E 4 HOH A 21 1621 117 HOH HOH . 
E 4 HOH A 22 1622 44 HOH HOH . 
E 4 HOH A 23 1623 70 HOH HOH . 
E 4 HOH A 24 1624 69 HOH HOH . 
E 4 HOH A 25 1625 42 HOH HOH . 
E 4 HOH A 26 1626 4 HOH HOH . 
E 4 HOH A 27 1627 51 HOH HOH . 
E 4 HOH A 28 1628 71 HOH HOH . 
E 4 HOH A 29 1629 48 HOH HOH . 
E 4 HOH A 30 1630 80 HOH HOH . 
E 4 HOH A 31 1631 77 HOH HOH . 
E 4 HOH A 32 1632 194 HOH HOH . 
E 4 HOH A 33 1633 190 HOH HOH . 
E 4 HOH A 34 1634 123 HOH HOH . 
E 4 HOH A 35 1635 178 HOH HOH . 
E 4 HOH A 36 1636 179 HOH HOH . 
E 4 HOH A 37 1637 130 HOH HOH . 
E 4 HOH A 38 1638 29 HOH HOH . 
E 4 HOH A 39 1639 16 HOH HOH . 
E 4 HOH A 40 1640 22 HOH HOH . 
E 4 HOH A 41 1641 26 HOH HOH . 
E 4 HOH A 42 1642 153 HOH HOH . 
E 4 HOH A 43 1643 187 HOH HOH . 
E 4 HOH A 44 1644 94 HOH HOH . 
E 4 HOH A 45 1645 41 HOH HOH . 
E 4 HOH A 46 1646 53 HOH HOH . 
E 4 HOH A 47 1647 182 HOH HOH . 
E 4 HOH A 48 1648 167 HOH HOH . 
E 4 HOH A 49 1649 88 HOH HOH . 
E 4 HOH A 50 1650 158 HOH HOH . 
E 4 HOH A 51 1651 56 HOH HOH . 
E 4 HOH A 52 1652 43 HOH HOH . 
E 4 HOH A 53 1653 63 HOH HOH . 
E 4 HOH A 54 1654 129 HOH HOH . 
E 4 HOH A 55 1655 142 HOH HOH . 
E 4 HOH A 56 1656 49 HOH HOH . 
E 4 HOH A 57 1657 8 HOH HOH . 
E 4 HOH A 58 1658 96 HOH HOH . 
E 4 HOH A 59 1659 32 HOH HOH . 
E 4 HOH A 60 1660 103 HOH HOH . 
E 4 HOH A 61 1661 137 HOH HOH . 
E 4 HOH A 62 1662 189 HOH HOH . 
E 4 HOH A 63 1663 79 HOH HOH . 
E 4 HOH A 64 1664 36 HOH HOH . 
E 4 HOH A 65 1665 143 HOH HOH . 
E 4 HOH A 66 1666 65 HOH HOH . 
E 4 HOH A 67 1667 10 HOH HOH . 
E 4 HOH A 68 1668 20 HOH HOH . 
E 4 HOH A 69 1669 68 HOH HOH . 
E 4 HOH A 70 1670 57 HOH HOH . 
E 4 HOH A 71 1671 3 HOH HOH . 
E 4 HOH A 72 1672 74 HOH HOH . 
E 4 HOH A 73 1673 45 HOH HOH . 
E 4 HOH A 74 1674 83 HOH HOH . 
E 4 HOH A 75 1675 177 HOH HOH . 
E 4 HOH A 76 1676 164 HOH HOH . 
E 4 HOH A 77 1677 5 HOH HOH . 
E 4 HOH A 78 1678 144 HOH HOH . 
E 4 HOH A 79 1679 12 HOH HOH . 
E 4 HOH A 80 1680 30 HOH HOH . 
E 4 HOH A 81 1681 87 HOH HOH . 
E 4 HOH A 82 1682 169 HOH HOH . 
E 4 HOH A 83 1683 157 HOH HOH . 
E 4 HOH A 84 1684 78 HOH HOH . 
E 4 HOH A 85 1685 14 HOH HOH . 
E 4 HOH A 86 1686 15 HOH HOH . 
E 4 HOH A 87 1687 114 HOH HOH . 
E 4 HOH A 88 1688 2 HOH HOH . 
E 4 HOH A 89 1689 55 HOH HOH . 
E 4 HOH A 90 1690 155 HOH HOH . 
E 4 HOH A 91 1691 13 HOH HOH . 
E 4 HOH A 92 1692 122 HOH HOH . 
E 4 HOH A 93 1693 54 HOH HOH . 
E 4 HOH A 94 1694 176 HOH HOH . 
E 4 HOH A 95 1695 161 HOH HOH . 
E 4 HOH A 96 1696 112 HOH HOH . 
E 4 HOH A 97 1697 86 HOH HOH . 
E 4 HOH A 98 1698 124 HOH HOH . 
E 4 HOH A 99 1699 90 HOH HOH . 
E 4 HOH A 100 1700 59 HOH HOH . 
E 4 HOH A 101 1701 97 HOH HOH . 
E 4 HOH A 102 1702 25 HOH HOH . 
E 4 HOH A 103 1703 27 HOH HOH . 
E 4 HOH A 104 1704 50 HOH HOH . 
E 4 HOH A 105 1705 195 HOH HOH . 
E 4 HOH A 106 1706 66 HOH HOH . 
E 4 HOH A 107 1707 172 HOH HOH . 
E 4 HOH A 108 1708 11 HOH HOH . 
E 4 HOH A 109 1709 1 HOH HOH . 
E 4 HOH A 110 1710 92 HOH HOH . 
E 4 HOH A 111 1711 118 HOH HOH . 
E 4 HOH A 112 1712 128 HOH HOH . 
E 4 HOH A 113 1713 91 HOH HOH . 
E 4 HOH A 114 1714 109 HOH HOH . 
E 4 HOH A 115 1715 132 HOH HOH . 
E 4 HOH A 116 1716 148 HOH HOH . 
E 4 HOH A 117 1717 64 HOH HOH . 
E 4 HOH A 118 1718 35 HOH HOH . 
E 4 HOH A 119 1719 120 HOH HOH . 
E 4 HOH A 120 1720 196 HOH HOH . 
E 4 HOH A 121 1721 18 HOH HOH . 
E 4 HOH A 122 1722 93 HOH HOH . 
E 4 HOH A 123 1723 58 HOH HOH . 
E 4 HOH A 124 1724 101 HOH HOH . 
E 4 HOH A 125 1725 126 HOH HOH . 
E 4 HOH A 126 1726 28 HOH HOH . 
E 4 HOH A 127 1727 125 HOH HOH . 
E 4 HOH A 128 1728 162 HOH HOH . 
E 4 HOH A 129 1729 33 HOH HOH . 
E 4 HOH A 130 1730 82 HOH HOH . 
E 4 HOH A 131 1731 23 HOH HOH . 
E 4 HOH A 132 1732 127 HOH HOH . 
E 4 HOH A 133 1733 115 HOH HOH . 
E 4 HOH A 134 1734 131 HOH HOH . 
E 4 HOH A 135 1735 116 HOH HOH . 
E 4 HOH A 136 1736 85 HOH HOH . 
E 4 HOH A 137 1737 188 HOH HOH . 
E 4 HOH A 138 1738 145 HOH HOH . 
E 4 HOH A 139 1739 121 HOH HOH . 
E 4 HOH A 140 1740 67 HOH HOH . 
E 4 HOH A 141 1741 136 HOH HOH . 
E 4 HOH A 142 1742 107 HOH HOH . 
E 4 HOH A 143 1743 192 HOH HOH . 
E 4 HOH A 144 1744 52 HOH HOH . 
E 4 HOH A 145 1745 75 HOH HOH . 
E 4 HOH A 146 1746 186 HOH HOH . 
E 4 HOH A 147 1747 149 HOH HOH . 
E 4 HOH A 148 1748 168 HOH HOH . 
E 4 HOH A 149 1749 73 HOH HOH . 
E 4 HOH A 150 1750 135 HOH HOH . 
E 4 HOH A 151 1751 76 HOH HOH . 
E 4 HOH A 152 1752 146 HOH HOH . 
E 4 HOH A 153 1753 133 HOH HOH . 
E 4 HOH A 154 1754 60 HOH HOH . 
E 4 HOH A 155 1755 39 HOH HOH . 
E 4 HOH A 156 1756 191 HOH HOH . 
E 4 HOH A 157 1757 147 HOH HOH . 
E 4 HOH A 158 1758 34 HOH HOH . 
E 4 HOH A 159 1759 141 HOH HOH . 
E 4 HOH A 160 1760 37 HOH HOH . 
E 4 HOH A 161 1761 154 HOH HOH . 
E 4 HOH A 162 1762 134 HOH HOH . 
E 4 HOH A 163 1763 139 HOH HOH . 
E 4 HOH A 164 1764 185 HOH HOH . 
E 4 HOH A 165 1765 99 HOH HOH . 
E 4 HOH A 166 1766 175 HOH HOH . 
E 4 HOH A 167 1767 62 HOH HOH . 
E 4 HOH A 168 1768 150 HOH HOH . 
E 4 HOH A 169 1769 171 HOH HOH . 
E 4 HOH A 170 1770 98 HOH HOH . 
E 4 HOH A 171 1771 180 HOH HOH . 
E 4 HOH A 172 1772 108 HOH HOH . 
E 4 HOH A 173 1773 160 HOH HOH . 
E 4 HOH A 174 1774 183 HOH HOH . 
E 4 HOH A 175 1775 105 HOH HOH . 
E 4 HOH A 176 1776 84 HOH HOH . 
E 4 HOH A 177 1777 174 HOH HOH . 
E 4 HOH A 178 1778 102 HOH HOH . 
E 4 HOH A 179 1779 104 HOH HOH . 
E 4 HOH A 180 1780 197 HOH HOH . 
E 4 HOH A 181 1781 156 HOH HOH . 
E 4 HOH A 182 1782 184 HOH HOH . 
E 4 HOH A 183 1783 165 HOH HOH . 
E 4 HOH A 184 1784 152 HOH HOH . 
E 4 HOH A 185 1785 111 HOH HOH . 
E 4 HOH A 186 1786 119 HOH HOH . 
E 4 HOH A 187 1787 170 HOH HOH . 
E 4 HOH A 188 1788 181 HOH HOH . 
E 4 HOH A 189 1789 110 HOH HOH . 
E 4 HOH A 190 1790 81 HOH HOH . 
E 4 HOH A 191 1791 40 HOH HOH . 
E 4 HOH A 192 1792 163 HOH HOH . 
E 4 HOH A 193 1793 166 HOH HOH . 
E 4 HOH A 194 1794 193 HOH HOH . 
E 4 HOH A 195 1795 138 HOH HOH . 
E 4 HOH A 196 1796 95 HOH HOH . 
E 4 HOH A 197 1797 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 -24.367 23.16 -20.609 1 20.18 ? C1 GOL 1502 A 1 
HETATM 2 O O1 GOL . . . C 2 -23.673 22.088 -21.244 1 18.11 ? O1 GOL 1502 A 1 
HETATM 3 C C2 GOL . . . C 2 -23.657 23.547 -19.332 1 23.69 ? C2 GOL 1502 A 1 
HETATM 4 O O2 GOL . . . C 2 -24.477 24.384 -18.498 1 29.75 ? O2 GOL 1502 A 1 
HETATM 5 C C3 GOL . . . C 2 -23.317 22.292 -18.576 1 17.92 ? C3 GOL 1502 A 1 
HETATM 6 O O3 GOL . . . C 2 -22.212 22.537 -17.75 1 27.93 ? O3 GOL 1502 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#