data_4Z5Y # _model_server_result.job_id goIapenzsjoNQcgBDt6bwA _model_server_result.datetime_utc '2024-10-19 05:26:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4z5y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 4Z5Y # _exptl.entry_id 4Z5Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Z5Y _cell.length_a 86.202 _cell.length_b 86.202 _cell.length_c 106.625 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z5Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 20 A CYS 19 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc2 A SG CYS 22 A CYS 21 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc3 A SG CYS 25 A CYS 24 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc4 A NE2 HIS 94 A HIS 93 1_555 C CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc5 A OD2 ASP 188 A ASP 187 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? metalc ? metalc6 A OG1 THR 191 A THR 190 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc7 A NE2 HIS 270 A HIS 269 1_555 C CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc8 A OD1 ASN 273 A ASN 272 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc9 A O LEU 304 A LEU 303 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc10 C CU CU . A CU 402 1_555 E O HOH . A HOH 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc11 C CU CU . A CU 402 1_555 E O HOH . A HOH 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4Z5Y _atom_sites.fract_transf_matrix[1][1] 0.011601 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009379 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 320 ZN ZN . C 3 CU A 1 402 1 CU CU . D 4 NA A 1 403 1 NA NA . E 5 HOH A 1 501 212 HOH HOH . E 5 HOH A 2 502 91 HOH HOH . E 5 HOH A 3 503 110 HOH HOH . E 5 HOH A 4 504 129 HOH HOH . E 5 HOH A 5 505 216 HOH HOH . E 5 HOH A 6 506 5 HOH HOH . E 5 HOH A 7 507 255 HOH HOH . E 5 HOH A 8 508 200 HOH HOH . E 5 HOH A 9 509 204 HOH HOH . E 5 HOH A 10 510 221 HOH HOH . E 5 HOH A 11 511 171 HOH HOH . E 5 HOH A 12 512 131 HOH HOH . E 5 HOH A 13 513 111 HOH HOH . E 5 HOH A 14 514 62 HOH HOH . E 5 HOH A 15 515 92 HOH HOH . E 5 HOH A 16 516 126 HOH HOH . E 5 HOH A 17 517 158 HOH HOH . E 5 HOH A 18 518 51 HOH HOH . E 5 HOH A 19 519 168 HOH HOH . E 5 HOH A 20 520 208 HOH HOH . E 5 HOH A 21 521 178 HOH HOH . E 5 HOH A 22 522 17 HOH HOH . E 5 HOH A 23 523 27 HOH HOH . E 5 HOH A 24 524 134 HOH HOH . E 5 HOH A 25 525 23 HOH HOH . E 5 HOH A 26 526 53 HOH HOH . E 5 HOH A 27 527 65 HOH HOH . E 5 HOH A 28 528 152 HOH HOH . E 5 HOH A 29 529 2 HOH HOH . E 5 HOH A 30 530 15 HOH HOH . E 5 HOH A 31 531 56 HOH HOH . E 5 HOH A 32 532 36 HOH HOH . E 5 HOH A 33 533 257 HOH HOH . E 5 HOH A 34 534 113 HOH HOH . E 5 HOH A 35 535 144 HOH HOH . E 5 HOH A 36 536 188 HOH HOH . E 5 HOH A 37 537 236 HOH HOH . E 5 HOH A 38 538 78 HOH HOH . E 5 HOH A 39 539 46 HOH HOH . E 5 HOH A 40 540 114 HOH HOH . E 5 HOH A 41 541 30 HOH HOH . E 5 HOH A 42 542 38 HOH HOH . E 5 HOH A 43 543 83 HOH HOH . E 5 HOH A 44 544 68 HOH HOH . E 5 HOH A 45 545 81 HOH HOH . E 5 HOH A 46 546 206 HOH HOH . E 5 HOH A 47 547 1 HOH HOH . E 5 HOH A 48 548 138 HOH HOH . E 5 HOH A 49 549 50 HOH HOH . E 5 HOH A 50 550 225 HOH HOH . E 5 HOH A 51 551 192 HOH HOH . E 5 HOH A 52 552 231 HOH HOH . E 5 HOH A 53 553 89 HOH HOH . E 5 HOH A 54 554 26 HOH HOH . E 5 HOH A 55 555 3 HOH HOH . E 5 HOH A 56 556 35 HOH HOH . E 5 HOH A 57 557 41 HOH HOH . E 5 HOH A 58 558 6 HOH HOH . E 5 HOH A 59 559 60 HOH HOH . E 5 HOH A 60 560 133 HOH HOH . E 5 HOH A 61 561 44 HOH HOH . E 5 HOH A 62 562 14 HOH HOH . E 5 HOH A 63 563 63 HOH HOH . E 5 HOH A 64 564 39 HOH HOH . E 5 HOH A 65 565 72 HOH HOH . E 5 HOH A 66 566 34 HOH HOH . E 5 HOH A 67 567 93 HOH HOH . E 5 HOH A 68 568 24 HOH HOH . E 5 HOH A 69 569 66 HOH HOH . E 5 HOH A 70 570 235 HOH HOH . E 5 HOH A 71 571 135 HOH HOH . E 5 HOH A 72 572 79 HOH HOH . E 5 HOH A 73 573 58 HOH HOH . E 5 HOH A 74 574 95 HOH HOH . E 5 HOH A 75 575 54 HOH HOH . E 5 HOH A 76 576 90 HOH HOH . E 5 HOH A 77 577 128 HOH HOH . E 5 HOH A 78 578 191 HOH HOH . E 5 HOH A 79 579 199 HOH HOH . E 5 HOH A 80 580 103 HOH HOH . E 5 HOH A 81 581 211 HOH HOH . E 5 HOH A 82 582 32 HOH HOH . E 5 HOH A 83 583 29 HOH HOH . E 5 HOH A 84 584 101 HOH HOH . E 5 HOH A 85 585 145 HOH HOH . E 5 HOH A 86 586 16 HOH HOH . E 5 HOH A 87 587 82 HOH HOH . E 5 HOH A 88 588 119 HOH HOH . E 5 HOH A 89 589 4 HOH HOH . E 5 HOH A 90 590 213 HOH HOH . E 5 HOH A 91 591 123 HOH HOH . E 5 HOH A 92 592 106 HOH HOH . E 5 HOH A 93 593 7 HOH HOH . E 5 HOH A 94 594 80 HOH HOH . E 5 HOH A 95 595 9 HOH HOH . E 5 HOH A 96 596 37 HOH HOH . E 5 HOH A 97 597 13 HOH HOH . E 5 HOH A 98 598 183 HOH HOH . E 5 HOH A 99 599 18 HOH HOH . E 5 HOH A 100 600 71 HOH HOH . E 5 HOH A 101 601 42 HOH HOH . E 5 HOH A 102 602 153 HOH HOH . E 5 HOH A 103 603 112 HOH HOH . E 5 HOH A 104 604 20 HOH HOH . E 5 HOH A 105 605 137 HOH HOH . E 5 HOH A 106 606 57 HOH HOH . E 5 HOH A 107 607 175 HOH HOH . E 5 HOH A 108 608 102 HOH HOH . E 5 HOH A 109 609 108 HOH HOH . E 5 HOH A 110 610 49 HOH HOH . E 5 HOH A 111 611 201 HOH HOH . E 5 HOH A 112 612 45 HOH HOH . E 5 HOH A 113 613 243 HOH HOH . E 5 HOH A 114 614 31 HOH HOH . E 5 HOH A 115 615 117 HOH HOH . E 5 HOH A 116 616 157 HOH HOH . E 5 HOH A 117 617 8 HOH HOH . E 5 HOH A 118 618 40 HOH HOH . E 5 HOH A 119 619 12 HOH HOH . E 5 HOH A 120 620 223 HOH HOH . E 5 HOH A 121 621 33 HOH HOH . E 5 HOH A 122 622 99 HOH HOH . E 5 HOH A 123 623 55 HOH HOH . E 5 HOH A 124 624 88 HOH HOH . E 5 HOH A 125 625 47 HOH HOH . E 5 HOH A 126 626 149 HOH HOH . E 5 HOH A 127 627 218 HOH HOH . E 5 HOH A 128 628 67 HOH HOH . E 5 HOH A 129 629 132 HOH HOH . E 5 HOH A 130 630 127 HOH HOH . E 5 HOH A 131 631 202 HOH HOH . E 5 HOH A 132 632 107 HOH HOH . E 5 HOH A 133 633 154 HOH HOH . E 5 HOH A 134 634 210 HOH HOH . E 5 HOH A 135 635 146 HOH HOH . E 5 HOH A 136 636 166 HOH HOH . E 5 HOH A 137 637 25 HOH HOH . E 5 HOH A 138 638 120 HOH HOH . E 5 HOH A 139 639 21 HOH HOH . E 5 HOH A 140 640 19 HOH HOH . E 5 HOH A 141 641 189 HOH HOH . E 5 HOH A 142 642 75 HOH HOH . E 5 HOH A 143 643 116 HOH HOH . E 5 HOH A 144 644 147 HOH HOH . E 5 HOH A 145 645 254 HOH HOH . E 5 HOH A 146 646 228 HOH HOH . E 5 HOH A 147 647 22 HOH HOH . E 5 HOH A 148 648 86 HOH HOH . E 5 HOH A 149 649 181 HOH HOH . E 5 HOH A 150 650 142 HOH HOH . E 5 HOH A 151 651 140 HOH HOH . E 5 HOH A 152 652 172 HOH HOH . E 5 HOH A 153 653 155 HOH HOH . E 5 HOH A 154 654 77 HOH HOH . E 5 HOH A 155 655 148 HOH HOH . E 5 HOH A 156 656 69 HOH HOH . E 5 HOH A 157 657 203 HOH HOH . E 5 HOH A 158 658 73 HOH HOH . E 5 HOH A 159 659 94 HOH HOH . E 5 HOH A 160 660 48 HOH HOH . E 5 HOH A 161 661 64 HOH HOH . E 5 HOH A 162 662 136 HOH HOH . E 5 HOH A 163 663 250 HOH HOH . E 5 HOH A 164 664 98 HOH HOH . E 5 HOH A 165 665 124 HOH HOH . E 5 HOH A 166 666 186 HOH HOH . E 5 HOH A 167 667 198 HOH HOH . E 5 HOH A 168 668 237 HOH HOH . E 5 HOH A 169 669 244 HOH HOH . E 5 HOH A 170 670 184 HOH HOH . E 5 HOH A 171 671 43 HOH HOH . E 5 HOH A 172 672 165 HOH HOH . E 5 HOH A 173 673 219 HOH HOH . E 5 HOH A 174 674 59 HOH HOH . E 5 HOH A 175 675 76 HOH HOH . E 5 HOH A 176 676 217 HOH HOH . E 5 HOH A 177 677 251 HOH HOH . E 5 HOH A 178 678 118 HOH HOH . E 5 HOH A 179 679 205 HOH HOH . E 5 HOH A 180 680 121 HOH HOH . E 5 HOH A 181 681 182 HOH HOH . E 5 HOH A 182 682 215 HOH HOH . E 5 HOH A 183 683 84 HOH HOH . E 5 HOH A 184 684 209 HOH HOH . E 5 HOH A 185 685 246 HOH HOH . E 5 HOH A 186 686 196 HOH HOH . E 5 HOH A 187 687 241 HOH HOH . E 5 HOH A 188 688 11 HOH HOH . E 5 HOH A 189 689 245 HOH HOH . E 5 HOH A 190 690 180 HOH HOH . E 5 HOH A 191 691 28 HOH HOH . E 5 HOH A 192 692 173 HOH HOH . E 5 HOH A 193 693 256 HOH HOH . E 5 HOH A 194 694 242 HOH HOH . E 5 HOH A 195 695 70 HOH HOH . E 5 HOH A 196 696 238 HOH HOH . E 5 HOH A 197 697 170 HOH HOH . E 5 HOH A 198 698 10 HOH HOH . E 5 HOH A 199 699 226 HOH HOH . E 5 HOH A 200 700 249 HOH HOH . E 5 HOH A 201 701 151 HOH HOH . E 5 HOH A 202 702 207 HOH HOH . E 5 HOH A 203 703 61 HOH HOH . E 5 HOH A 204 704 239 HOH HOH . E 5 HOH A 205 705 109 HOH HOH . E 5 HOH A 206 706 229 HOH HOH . E 5 HOH A 207 707 176 HOH HOH . E 5 HOH A 208 708 187 HOH HOH . E 5 HOH A 209 709 104 HOH HOH . E 5 HOH A 210 710 161 HOH HOH . E 5 HOH A 211 711 96 HOH HOH . E 5 HOH A 212 712 179 HOH HOH . E 5 HOH A 213 713 232 HOH HOH . E 5 HOH A 214 714 115 HOH HOH . E 5 HOH A 215 715 252 HOH HOH . E 5 HOH A 216 716 185 HOH HOH . E 5 HOH A 217 717 247 HOH HOH . E 5 HOH A 218 718 222 HOH HOH . E 5 HOH A 219 719 253 HOH HOH . E 5 HOH A 220 720 150 HOH HOH . E 5 HOH A 221 721 240 HOH HOH . E 5 HOH A 222 722 74 HOH HOH . E 5 HOH A 223 723 194 HOH HOH . E 5 HOH A 224 724 160 HOH HOH . E 5 HOH A 225 725 174 HOH HOH . E 5 HOH A 226 726 159 HOH HOH . E 5 HOH A 227 727 97 HOH HOH . E 5 HOH A 228 728 193 HOH HOH . E 5 HOH A 229 729 52 HOH HOH . E 5 HOH A 230 730 85 HOH HOH . E 5 HOH A 231 731 227 HOH HOH . E 5 HOH A 232 732 234 HOH HOH . E 5 HOH A 233 733 162 HOH HOH . E 5 HOH A 234 734 163 HOH HOH . E 5 HOH A 235 735 169 HOH HOH . E 5 HOH A 236 736 156 HOH HOH . E 5 HOH A 237 737 125 HOH HOH . E 5 HOH A 238 738 164 HOH HOH . E 5 HOH A 239 739 224 HOH HOH . E 5 HOH A 240 740 143 HOH HOH . E 5 HOH A 241 741 220 HOH HOH . E 5 HOH A 242 742 141 HOH HOH . E 5 HOH A 243 743 100 HOH HOH . E 5 HOH A 244 744 195 HOH HOH . E 5 HOH A 245 745 105 HOH HOH . E 5 HOH A 246 746 190 HOH HOH . E 5 HOH A 247 747 139 HOH HOH . E 5 HOH A 248 748 87 HOH HOH . E 5 HOH A 249 749 248 HOH HOH . E 5 HOH A 250 750 130 HOH HOH . E 5 HOH A 251 751 197 HOH HOH . E 5 HOH A 252 752 233 HOH HOH . E 5 HOH A 253 753 177 HOH HOH . E 5 HOH A 254 754 167 HOH HOH . E 5 HOH A 255 755 122 HOH HOH . E 5 HOH A 256 756 214 HOH HOH . E 5 HOH A 257 757 230 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -16.277 _atom_site.Cartn_y -23.449 _atom_site.Cartn_z -12.383 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 27.17 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #