data_4Z6A # _model_server_result.job_id 5S-lfW84lIG8V-MxMEbocw _model_server_result.datetime_utc '2025-04-17 12:00:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4z6a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 4Z6A # _exptl.entry_id 4Z6A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Z6A _cell.length_a 67.03 _cell.length_b 81.7 _cell.length_c 124.56 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z6A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 L CYS 50 1_555 A SG CYS 14 L CYS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 8 L CYS 55 1_555 A SG CYS 23 L CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 25 L CYS 72 1_555 A SG CYS 34 L CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 A SG CYS 44 L CYS 91 1_555 A SG CYS 55 L CYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 A SG CYS 51 L CYS 98 1_555 A SG CYS 65 L CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf6 A SG CYS 67 L CYS 114 1_555 A SG CYS 80 L CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 A SG CYS 88 L CYS 135 1_555 B SG CYS 110 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 B SG CYS 7 H CYS 22 1_555 B SG CYS 12 H CYS 27 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.045 ? disulf ? disulf9 B SG CYS 26 H CYS 41 1_555 B SG CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf10 B SG CYS 158 H CYS 168 1_555 B SG CYS 172 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf11 B SG CYS 183 H CYS 191 1_555 B SG CYS 211 H CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf12 C SG CYS 46 T CYS 49 1_555 C SG CYS 54 T CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf13 C SG CYS 183 T CYS 186 1_555 C SG CYS 206 T CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 A OG SER 13 L SER 60 1_555 E C1 FUC . L FUC 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale2 B NE2 HIS 41 H HIS 57 1_555 F C3 0Z6 . H 0Z6 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale3 B OG SER 187 H SER 195 1_555 F C2 0Z6 . H 0Z6 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale4 B O GLY 208 H GLY 216 1_555 F N 0Z6 . H 0Z6 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.303 ? metalc ? metalc1 B OE1 GLU 58 H GLU 70 1_555 G CA CA . H CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc2 B OE2 GLU 58 H GLU 70 1_555 G CA CA . H CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? metalc ? metalc3 B O ASP 60 H ASP 72 1_555 G CA CA . H CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc4 B O GLU 63 H GLU 75 1_555 G CA CA . H CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc5 B OE1 GLU 68 H GLU 80 1_555 G CA CA . H CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc6 G CA CA . H CA 502 1_555 J O HOH . H HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc7 G CA CA . H CA 502 1_555 J O HOH . H HOH 687 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4Z6A _atom_sites.fract_transf_matrix[1][1] 0.014919 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01224 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008028 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BGC L 1 201 201 BGC BGC . E 5 FUC L 1 202 202 FUC FUC . F 6 0Z6 H 1 501 501 0Z6 0Z6 . G 7 CA H 1 502 502 CA CA . H 8 CIT T 1 301 301 CIT CIT . I 9 HOH L 1 301 301 HOH HOH . I 9 HOH L 2 302 302 HOH HOH . I 9 HOH L 3 303 303 HOH HOH . I 9 HOH L 4 304 304 HOH HOH . I 9 HOH L 5 305 305 HOH HOH . I 9 HOH L 6 306 306 HOH HOH . I 9 HOH L 7 307 307 HOH HOH . I 9 HOH L 8 308 308 HOH HOH . I 9 HOH L 9 309 309 HOH HOH . I 9 HOH L 10 310 310 HOH HOH . I 9 HOH L 11 311 311 HOH HOH . I 9 HOH L 12 312 312 HOH HOH . I 9 HOH L 13 313 313 HOH HOH . I 9 HOH L 14 314 314 HOH HOH . I 9 HOH L 15 315 315 HOH HOH . I 9 HOH L 16 316 316 HOH HOH . I 9 HOH L 17 317 317 HOH HOH . I 9 HOH L 18 318 318 HOH HOH . I 9 HOH L 19 319 319 HOH HOH . I 9 HOH L 20 320 320 HOH HOH . I 9 HOH L 21 321 321 HOH HOH . I 9 HOH L 22 322 322 HOH HOH . I 9 HOH L 23 323 323 HOH HOH . I 9 HOH L 24 324 324 HOH HOH . I 9 HOH L 25 325 325 HOH HOH . I 9 HOH L 26 326 326 HOH HOH . J 9 HOH H 1 601 601 HOH HOH . J 9 HOH H 2 602 602 HOH HOH . J 9 HOH H 3 603 603 HOH HOH . J 9 HOH H 4 604 604 HOH HOH . J 9 HOH H 5 605 605 HOH HOH . J 9 HOH H 6 606 606 HOH HOH . J 9 HOH H 7 607 607 HOH HOH . J 9 HOH H 8 608 608 HOH HOH . J 9 HOH H 9 609 609 HOH HOH . J 9 HOH H 10 610 610 HOH HOH . J 9 HOH H 11 611 611 HOH HOH . J 9 HOH H 12 612 612 HOH HOH . J 9 HOH H 13 613 613 HOH HOH . J 9 HOH H 14 614 614 HOH HOH . J 9 HOH H 15 615 615 HOH HOH . J 9 HOH H 16 616 616 HOH HOH . J 9 HOH H 17 617 617 HOH HOH . J 9 HOH H 18 618 618 HOH HOH . J 9 HOH H 19 619 619 HOH HOH . J 9 HOH H 20 620 620 HOH HOH . J 9 HOH H 21 621 621 HOH HOH . J 9 HOH H 22 622 622 HOH HOH . J 9 HOH H 23 623 623 HOH HOH . J 9 HOH H 24 624 624 HOH HOH . J 9 HOH H 25 625 625 HOH HOH . J 9 HOH H 26 626 626 HOH HOH . J 9 HOH H 27 627 627 HOH HOH . J 9 HOH H 28 628 628 HOH HOH . J 9 HOH H 29 629 629 HOH HOH . J 9 HOH H 30 630 630 HOH HOH . J 9 HOH H 31 631 631 HOH HOH . J 9 HOH H 32 632 632 HOH HOH . J 9 HOH H 33 633 633 HOH HOH . J 9 HOH H 34 634 634 HOH HOH . J 9 HOH H 35 635 635 HOH HOH . J 9 HOH H 36 636 636 HOH HOH . J 9 HOH H 37 637 637 HOH HOH . J 9 HOH H 38 638 638 HOH HOH . J 9 HOH H 39 639 639 HOH HOH . J 9 HOH H 40 640 640 HOH HOH . J 9 HOH H 41 641 641 HOH HOH . J 9 HOH H 42 642 642 HOH HOH . J 9 HOH H 43 643 643 HOH HOH . J 9 HOH H 44 644 644 HOH HOH . J 9 HOH H 45 645 645 HOH HOH . J 9 HOH H 46 646 646 HOH HOH . J 9 HOH H 47 647 647 HOH HOH . J 9 HOH H 48 648 648 HOH HOH . J 9 HOH H 49 649 649 HOH HOH . J 9 HOH H 50 650 650 HOH HOH . J 9 HOH H 51 651 651 HOH HOH . J 9 HOH H 52 652 652 HOH HOH . J 9 HOH H 53 653 653 HOH HOH . J 9 HOH H 54 654 654 HOH HOH . J 9 HOH H 55 655 655 HOH HOH . J 9 HOH H 56 656 656 HOH HOH . J 9 HOH H 57 657 657 HOH HOH . J 9 HOH H 58 658 658 HOH HOH . J 9 HOH H 59 659 659 HOH HOH . J 9 HOH H 60 660 660 HOH HOH . J 9 HOH H 61 661 661 HOH HOH . J 9 HOH H 62 662 662 HOH HOH . J 9 HOH H 63 663 663 HOH HOH . J 9 HOH H 64 664 664 HOH HOH . J 9 HOH H 65 665 665 HOH HOH . J 9 HOH H 66 666 666 HOH HOH . J 9 HOH H 67 667 667 HOH HOH . J 9 HOH H 68 668 668 HOH HOH . J 9 HOH H 69 669 669 HOH HOH . J 9 HOH H 70 670 670 HOH HOH . J 9 HOH H 71 671 671 HOH HOH . J 9 HOH H 72 672 672 HOH HOH . J 9 HOH H 73 673 673 HOH HOH . J 9 HOH H 74 674 674 HOH HOH . J 9 HOH H 75 675 675 HOH HOH . J 9 HOH H 76 676 676 HOH HOH . J 9 HOH H 77 677 677 HOH HOH . J 9 HOH H 78 678 678 HOH HOH . J 9 HOH H 79 679 679 HOH HOH . J 9 HOH H 80 680 680 HOH HOH . J 9 HOH H 81 681 681 HOH HOH . J 9 HOH H 82 682 682 HOH HOH . J 9 HOH H 83 683 683 HOH HOH . J 9 HOH H 84 684 684 HOH HOH . J 9 HOH H 85 685 685 HOH HOH . J 9 HOH H 86 686 686 HOH HOH . J 9 HOH H 87 687 687 HOH HOH . J 9 HOH H 88 688 688 HOH HOH . J 9 HOH H 89 689 689 HOH HOH . J 9 HOH H 90 690 690 HOH HOH . J 9 HOH H 91 691 691 HOH HOH . J 9 HOH H 92 692 692 HOH HOH . J 9 HOH H 93 693 693 HOH HOH . J 9 HOH H 94 694 694 HOH HOH . J 9 HOH H 95 695 695 HOH HOH . J 9 HOH H 96 696 696 HOH HOH . J 9 HOH H 97 697 697 HOH HOH . J 9 HOH H 98 698 698 HOH HOH . J 9 HOH H 99 699 699 HOH HOH . J 9 HOH H 100 700 700 HOH HOH . J 9 HOH H 101 701 701 HOH HOH . J 9 HOH H 102 702 702 HOH HOH . J 9 HOH H 103 703 703 HOH HOH . J 9 HOH H 104 704 704 HOH HOH . J 9 HOH H 105 705 705 HOH HOH . J 9 HOH H 106 706 706 HOH HOH . J 9 HOH H 107 707 707 HOH HOH . J 9 HOH H 108 708 708 HOH HOH . J 9 HOH H 109 709 709 HOH HOH . J 9 HOH H 110 710 710 HOH HOH . J 9 HOH H 111 711 711 HOH HOH . J 9 HOH H 112 712 712 HOH HOH . J 9 HOH H 113 713 713 HOH HOH . J 9 HOH H 114 714 714 HOH HOH . J 9 HOH H 115 715 715 HOH HOH . J 9 HOH H 116 716 716 HOH HOH . J 9 HOH H 117 717 717 HOH HOH . J 9 HOH H 118 718 718 HOH HOH . J 9 HOH H 119 719 719 HOH HOH . J 9 HOH H 120 720 720 HOH HOH . J 9 HOH H 121 721 721 HOH HOH . J 9 HOH H 122 722 722 HOH HOH . J 9 HOH H 123 723 723 HOH HOH . J 9 HOH H 124 724 724 HOH HOH . J 9 HOH H 125 725 725 HOH HOH . J 9 HOH H 126 726 726 HOH HOH . J 9 HOH H 127 727 727 HOH HOH . J 9 HOH H 128 728 728 HOH HOH . J 9 HOH H 129 729 729 HOH HOH . J 9 HOH H 130 730 730 HOH HOH . J 9 HOH H 131 731 731 HOH HOH . J 9 HOH H 132 732 732 HOH HOH . J 9 HOH H 133 733 733 HOH HOH . J 9 HOH H 134 734 734 HOH HOH . J 9 HOH H 135 735 735 HOH HOH . J 9 HOH H 136 736 736 HOH HOH . J 9 HOH H 137 737 737 HOH HOH . J 9 HOH H 138 738 738 HOH HOH . J 9 HOH H 139 739 739 HOH HOH . J 9 HOH H 140 740 740 HOH HOH . J 9 HOH H 141 741 741 HOH HOH . K 9 HOH T 1 401 401 HOH HOH . K 9 HOH T 2 402 402 HOH HOH . K 9 HOH T 3 403 403 HOH HOH . K 9 HOH T 4 404 404 HOH HOH . K 9 HOH T 5 405 405 HOH HOH . K 9 HOH T 6 406 406 HOH HOH . K 9 HOH T 7 407 407 HOH HOH . K 9 HOH T 8 408 408 HOH HOH . K 9 HOH T 9 409 409 HOH HOH . K 9 HOH T 10 410 410 HOH HOH . K 9 HOH T 11 411 411 HOH HOH . K 9 HOH T 12 412 412 HOH HOH . K 9 HOH T 13 413 413 HOH HOH . K 9 HOH T 14 414 414 HOH HOH . K 9 HOH T 15 415 415 HOH HOH . K 9 HOH T 16 416 416 HOH HOH . K 9 HOH T 17 417 417 HOH HOH . K 9 HOH T 18 418 418 HOH HOH . K 9 HOH T 19 419 419 HOH HOH . K 9 HOH T 20 420 420 HOH HOH . K 9 HOH T 21 421 421 HOH HOH . K 9 HOH T 22 422 422 HOH HOH . K 9 HOH T 23 423 423 HOH HOH . K 9 HOH T 24 424 424 HOH HOH . K 9 HOH T 25 425 425 HOH HOH . K 9 HOH T 26 426 426 HOH HOH . K 9 HOH T 27 427 427 HOH HOH . K 9 HOH T 28 428 428 HOH HOH . K 9 HOH T 29 429 429 HOH HOH . K 9 HOH T 30 430 430 HOH HOH . K 9 HOH T 31 431 431 HOH HOH . K 9 HOH T 32 432 432 HOH HOH . K 9 HOH T 33 433 433 HOH HOH . K 9 HOH T 34 434 434 HOH HOH . K 9 HOH T 35 435 435 HOH HOH . K 9 HOH T 36 436 436 HOH HOH . K 9 HOH T 37 437 437 HOH HOH . K 9 HOH T 38 438 438 HOH HOH . K 9 HOH T 39 439 439 HOH HOH . K 9 HOH T 40 440 440 HOH HOH . K 9 HOH T 41 441 441 HOH HOH . K 9 HOH T 42 442 442 HOH HOH . K 9 HOH T 43 443 443 HOH HOH . K 9 HOH T 44 444 444 HOH HOH . K 9 HOH T 45 445 445 HOH HOH . K 9 HOH T 46 446 446 HOH HOH . K 9 HOH T 47 447 447 HOH HOH . K 9 HOH T 48 448 448 HOH HOH . K 9 HOH T 49 449 449 HOH HOH . K 9 HOH T 50 450 450 HOH HOH . K 9 HOH T 51 451 451 HOH HOH . K 9 HOH T 52 452 452 HOH HOH . K 9 HOH T 53 453 453 HOH HOH . K 9 HOH T 54 454 454 HOH HOH . K 9 HOH T 55 455 455 HOH HOH . K 9 HOH T 56 456 456 HOH HOH . K 9 HOH T 57 457 457 HOH HOH . K 9 HOH T 58 458 458 HOH HOH . K 9 HOH T 59 459 459 HOH HOH . K 9 HOH T 60 460 460 HOH HOH . K 9 HOH T 61 461 461 HOH HOH . K 9 HOH T 62 462 462 HOH HOH . K 9 HOH T 63 463 463 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 7 _atom_site.Cartn_x -27.237 _atom_site.Cartn_y -8.329 _atom_site.Cartn_z 56.775 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 64.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 502 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #