data_4Z7C # _model_server_result.job_id Z7y6RPaPhIX4fM04_o-pXA _model_server_result.datetime_utc '2025-09-14 07:14:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4z7c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4Z7C # _exptl.entry_id 4Z7C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4Z7C _cell.length_a 152.13 _cell.length_b 152.13 _cell.length_c 108.582 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z7C _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 6 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 209 A CYS 210 1_555 A SG CYS 209 A CYS 210 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc1 A OG1 THR 49 A THR 50 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.925 ? metalc ? metalc2 A O LYS 90 A LYS 91 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc3 A OE2 GLU 92 A GLU 93 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 273 n n P O2 PO4 sing 274 n n P O3 PO4 sing 275 n n P O4 PO4 sing 276 n n # _atom_sites.entry_id 4Z7C _atom_sites.fract_transf_matrix[1][1] 0.006573 _atom_sites.fract_transf_matrix[1][2] 0.003795 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00759 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00921 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 401 1 PO4 PO4 . C 3 NA A 1 402 1 NA NA . D 2 PO4 A 1 403 1 PO4 PO4 . E 4 GOL A 1 404 3968 GOL GOL . F 5 HOH A 1 501 15 HOH HOH . F 5 HOH A 2 502 64 HOH HOH . F 5 HOH A 3 503 37 HOH HOH . F 5 HOH A 4 504 40 HOH HOH . F 5 HOH A 5 505 123 HOH HOH . F 5 HOH A 6 506 108 HOH HOH . F 5 HOH A 7 507 18 HOH HOH . F 5 HOH A 8 508 106 HOH HOH . F 5 HOH A 9 509 2 HOH HOH . F 5 HOH A 10 510 9 HOH HOH . F 5 HOH A 11 511 13 HOH HOH . F 5 HOH A 12 512 122 HOH HOH . F 5 HOH A 13 513 4 HOH HOH . F 5 HOH A 14 514 81 HOH HOH . F 5 HOH A 15 515 46 HOH HOH . F 5 HOH A 16 516 115 HOH HOH . F 5 HOH A 17 517 49 HOH HOH . F 5 HOH A 18 518 7 HOH HOH . F 5 HOH A 19 519 17 HOH HOH . F 5 HOH A 20 520 43 HOH HOH . F 5 HOH A 21 521 69 HOH HOH . F 5 HOH A 22 522 45 HOH HOH . F 5 HOH A 23 523 70 HOH HOH . F 5 HOH A 24 524 20 HOH HOH . F 5 HOH A 25 525 101 HOH HOH . F 5 HOH A 26 526 91 HOH HOH . F 5 HOH A 27 527 14 HOH HOH . F 5 HOH A 28 528 121 HOH HOH . F 5 HOH A 29 529 29 HOH HOH . F 5 HOH A 30 530 32 HOH HOH . F 5 HOH A 31 531 67 HOH HOH . F 5 HOH A 32 532 38 HOH HOH . F 5 HOH A 33 533 24 HOH HOH . F 5 HOH A 34 534 127 HOH HOH . F 5 HOH A 35 535 62 HOH HOH . F 5 HOH A 36 536 133 HOH HOH . F 5 HOH A 37 537 21 HOH HOH . F 5 HOH A 38 538 90 HOH HOH . F 5 HOH A 39 539 58 HOH HOH . F 5 HOH A 40 540 73 HOH HOH . F 5 HOH A 41 541 10 HOH HOH . F 5 HOH A 42 542 80 HOH HOH . F 5 HOH A 43 543 27 HOH HOH . F 5 HOH A 44 544 51 HOH HOH . F 5 HOH A 45 545 30 HOH HOH . F 5 HOH A 46 546 34 HOH HOH . F 5 HOH A 47 547 66 HOH HOH . F 5 HOH A 48 548 12 HOH HOH . F 5 HOH A 49 549 5 HOH HOH . F 5 HOH A 50 550 134 HOH HOH . F 5 HOH A 51 551 16 HOH HOH . F 5 HOH A 52 552 71 HOH HOH . F 5 HOH A 53 553 72 HOH HOH . F 5 HOH A 54 554 88 HOH HOH . F 5 HOH A 55 555 39 HOH HOH . F 5 HOH A 56 556 116 HOH HOH . F 5 HOH A 57 557 8 HOH HOH . F 5 HOH A 58 558 89 HOH HOH . F 5 HOH A 59 559 11 HOH HOH . F 5 HOH A 60 560 124 HOH HOH . F 5 HOH A 61 561 44 HOH HOH . F 5 HOH A 62 562 128 HOH HOH . F 5 HOH A 63 563 117 HOH HOH . F 5 HOH A 64 564 26 HOH HOH . F 5 HOH A 65 565 113 HOH HOH . F 5 HOH A 66 566 83 HOH HOH . F 5 HOH A 67 567 100 HOH HOH . F 5 HOH A 68 568 95 HOH HOH . F 5 HOH A 69 569 78 HOH HOH . F 5 HOH A 70 570 19 HOH HOH . F 5 HOH A 71 571 22 HOH HOH . F 5 HOH A 72 572 103 HOH HOH . F 5 HOH A 73 573 63 HOH HOH . F 5 HOH A 74 574 92 HOH HOH . F 5 HOH A 75 575 3 HOH HOH . F 5 HOH A 76 576 50 HOH HOH . F 5 HOH A 77 577 76 HOH HOH . F 5 HOH A 78 578 28 HOH HOH . F 5 HOH A 79 579 107 HOH HOH . F 5 HOH A 80 580 42 HOH HOH . F 5 HOH A 81 581 53 HOH HOH . F 5 HOH A 82 582 84 HOH HOH . F 5 HOH A 83 583 31 HOH HOH . F 5 HOH A 84 584 131 HOH HOH . F 5 HOH A 85 585 87 HOH HOH . F 5 HOH A 86 586 1 HOH HOH . F 5 HOH A 87 587 110 HOH HOH . F 5 HOH A 88 588 130 HOH HOH . F 5 HOH A 89 589 41 HOH HOH . F 5 HOH A 90 590 118 HOH HOH . F 5 HOH A 91 591 6 HOH HOH . F 5 HOH A 92 592 56 HOH HOH . F 5 HOH A 93 593 55 HOH HOH . F 5 HOH A 94 594 136 HOH HOH . F 5 HOH A 95 595 35 HOH HOH . F 5 HOH A 96 596 96 HOH HOH . F 5 HOH A 97 597 132 HOH HOH . F 5 HOH A 98 598 125 HOH HOH . F 5 HOH A 99 599 97 HOH HOH . F 5 HOH A 100 600 109 HOH HOH . F 5 HOH A 101 601 98 HOH HOH . F 5 HOH A 102 602 75 HOH HOH . F 5 HOH A 103 603 33 HOH HOH . F 5 HOH A 104 604 137 HOH HOH . F 5 HOH A 105 605 79 HOH HOH . F 5 HOH A 106 606 47 HOH HOH . F 5 HOH A 107 607 52 HOH HOH . F 5 HOH A 108 608 120 HOH HOH . F 5 HOH A 109 609 25 HOH HOH . F 5 HOH A 110 610 114 HOH HOH . F 5 HOH A 111 611 23 HOH HOH . F 5 HOH A 112 612 68 HOH HOH . F 5 HOH A 113 613 135 HOH HOH . F 5 HOH A 114 614 77 HOH HOH . F 5 HOH A 115 615 74 HOH HOH . F 5 HOH A 116 616 65 HOH HOH . F 5 HOH A 117 617 93 HOH HOH . F 5 HOH A 118 618 57 HOH HOH . F 5 HOH A 119 619 126 HOH HOH . F 5 HOH A 120 620 54 HOH HOH . F 5 HOH A 121 621 104 HOH HOH . F 5 HOH A 122 622 102 HOH HOH . F 5 HOH A 123 623 129 HOH HOH . F 5 HOH A 124 624 119 HOH HOH . F 5 HOH A 125 625 59 HOH HOH . F 5 HOH A 126 626 111 HOH HOH . F 5 HOH A 127 627 60 HOH HOH . F 5 HOH A 128 628 105 HOH HOH . F 5 HOH A 129 629 61 HOH HOH . F 5 HOH A 130 630 82 HOH HOH . F 5 HOH A 131 631 48 HOH HOH . F 5 HOH A 132 632 36 HOH HOH . F 5 HOH A 133 633 94 HOH HOH . F 5 HOH A 134 634 140 HOH HOH . F 5 HOH A 135 635 99 HOH HOH . F 5 HOH A 136 636 86 HOH HOH . F 5 HOH A 137 637 138 HOH HOH . F 5 HOH A 138 638 85 HOH HOH . F 5 HOH A 139 639 112 HOH HOH . F 5 HOH A 140 640 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 11.215 18.696 16.517 1 28.95 ? P PO4 401 A 1 HETATM 2 O O1 PO4 . . . B 2 11.957 18.95 15.231 1 32.44 ? O1 PO4 401 A 1 HETATM 3 O O2 PO4 . . . B 2 9.801 19.183 16.341 1 28.44 ? O2 PO4 401 A 1 HETATM 4 O O3 PO4 . . . B 2 11.247 17.222 16.829 1 28.18 ? O3 PO4 401 A 1 HETATM 5 O O4 PO4 . . . B 2 11.822 19.503 17.652 1 29.88 ? O4 PO4 401 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #