data_4Z7W # _model_server_result.job_id 9K-WXWFyoNDSvUr9z2Ooyg _model_server_result.datetime_utc '2024-11-17 08:53:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4z7w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":301}' # _entry.id 4Z7W # _exptl.entry_id 4Z7W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.63 _cell.angle_gamma 90 _cell.entry_id 4Z7W _cell.length_a 66.623 _cell.length_b 200.518 _cell.length_c 87.183 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z7W _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? pentameric 5 author_defined_assembly 1 ? pentameric 5 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,J,K,M,P,Q,V,W 1 1 C,D,E,F,I,L,N,O,R,S,T,U,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id O _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 6 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 6 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 6 3 2 MAN NAG C1 O1 . O3 HO3 . sing 3 ? 6 4 3 MAN MAN C1 O1 . O6 HO6 . sing 4 ? 6 5 1 FUC NAG C1 O1 . O3 HO3 . sing 5 ? 6 6 1 FUC NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 6 n K NAG 1 K 1 NAG A 1000 NAG 6 n K NAG 2 K 2 NAG A 1001 NAG 6 n K MAN 3 K 3 MAN A 1004 MAN 6 n K MAN 4 K 4 MAN A 1005 MAN 6 n K FUC 5 K 5 FUC A 1002 FUC 6 n K FUC 6 K 6 FUC A 1003 FUC 6 n L NAG 1 L 1 NAG C 1000 NAG 6 n L NAG 2 L 2 NAG C 1001 NAG 6 n L MAN 3 L 3 MAN C 1004 MAN 6 n L MAN 4 L 4 MAN C 1005 MAN 6 n L FUC 5 L 5 FUC C 1002 FUC 6 n L FUC 6 L 6 FUC C 1003 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 110 A CYS 107 1_555 A SG CYS 166 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 B SG CYS 28 B CYS 15 1_555 B SG CYS 92 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 B SG CYS 130 B CYS 117 1_555 B SG CYS 186 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 C SG CYS 110 C CYS 107 1_555 C SG CYS 166 C CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 D SG CYS 28 D CYS 15 1_555 D SG CYS 92 D CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 D SG CYS 130 D CYS 117 1_555 D SG CYS 186 D CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 E SG CYS 22 E CYS 23 1_555 E SG CYS 90 E CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf8 E SG CYS 135 E CYS 151 1_555 E SG CYS 185 E CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf9 E SG CYS 160 E CYS 176 1_555 F SG CYS 168 F CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf10 F SG CYS 21 F CYS 23 1_555 F SG CYS 89 F CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf11 F SG CYS 142 F CYS 158 1_555 F SG CYS 207 F CYS 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf12 G SG CYS 22 G CYS 23 1_555 G SG CYS 90 G CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf13 G SG CYS 135 G CYS 151 1_555 G SG CYS 185 G CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf14 G SG CYS 160 G CYS 176 1_555 H SG CYS 168 H CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf15 H SG CYS 21 H CYS 23 1_555 H SG CYS 89 H CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf16 H SG CYS 142 H CYS 158 1_555 H SG CYS 207 H CYS 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 A ND2 ASN 81 A ASN 78 1_555 K C1 NAG . K NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale2 A ND2 ASN 121 A ASN 118 1_555 M C1 NAG . A NAG 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale3 C ND2 ASN 81 C ASN 78 1_555 L C1 NAG . L NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale4 C ND2 ASN 121 C ASN 118 1_555 N C1 NAG . C NAG 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale5 K O4 NAG . K NAG 1 1_555 K C1 NAG . K NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale6 K O3 NAG . K NAG 1 1_555 K C1 FUC . K FUC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale7 K O6 NAG . K NAG 1 1_555 K C1 FUC . K FUC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale8 K O3 NAG . K NAG 2 1_555 K C1 MAN . K MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale9 K O6 MAN . K MAN 3 1_555 K C1 MAN . K MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.407 ? covale ? covale10 L O4 NAG . L NAG 1 1_555 L C1 NAG . L NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale11 L O3 NAG . L NAG 1 1_555 L C1 FUC . L FUC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale12 L O6 NAG . L NAG 1 1_555 L C1 FUC . L FUC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.399 ? covale ? covale13 L O3 NAG . L NAG 2 1_555 L C1 MAN . L MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale14 L O6 MAN . L MAN 3 1_555 L C1 MAN . L MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.391 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 367 n n S O2 SO4 doub 368 n n S O3 SO4 sing 369 n n S O4 SO4 sing 370 n n # _atom_sites.entry_id 4Z7W _atom_sites.fract_transf_matrix[1][1] 0.01501 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002817 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004987 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01167 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 7 NAG A 1 207 2001 NAG NAG . N 7 NAG C 1 207 2001 NAG NAG . O 8 SO4 F 1 301 1 SO4 SO4 . P 9 HOH A 1 301 423 HOH HOH . P 9 HOH A 2 302 181 HOH HOH . P 9 HOH A 3 303 36 HOH HOH . P 9 HOH A 4 304 245 HOH HOH . P 9 HOH A 5 305 6 HOH HOH . P 9 HOH A 6 306 370 HOH HOH . P 9 HOH A 7 307 210 HOH HOH . P 9 HOH A 8 308 120 HOH HOH . P 9 HOH A 9 309 30 HOH HOH . P 9 HOH A 10 310 65 HOH HOH . P 9 HOH A 11 311 60 HOH HOH . P 9 HOH A 12 312 28 HOH HOH . P 9 HOH A 13 313 11 HOH HOH . P 9 HOH A 14 314 37 HOH HOH . P 9 HOH A 15 315 408 HOH HOH . Q 9 HOH B 1 301 121 HOH HOH . Q 9 HOH B 2 302 208 HOH HOH . Q 9 HOH B 3 303 54 HOH HOH . Q 9 HOH B 4 304 160 HOH HOH . Q 9 HOH B 5 305 17 HOH HOH . Q 9 HOH B 6 306 255 HOH HOH . Q 9 HOH B 7 307 118 HOH HOH . Q 9 HOH B 8 308 382 HOH HOH . Q 9 HOH B 9 309 156 HOH HOH . Q 9 HOH B 10 310 402 HOH HOH . Q 9 HOH B 11 311 150 HOH HOH . Q 9 HOH B 12 312 70 HOH HOH . Q 9 HOH B 13 313 104 HOH HOH . Q 9 HOH B 14 314 23 HOH HOH . Q 9 HOH B 15 315 325 HOH HOH . Q 9 HOH B 16 316 132 HOH HOH . Q 9 HOH B 17 317 72 HOH HOH . Q 9 HOH B 18 318 323 HOH HOH . R 9 HOH C 1 301 38 HOH HOH . R 9 HOH C 2 302 107 HOH HOH . R 9 HOH C 3 303 310 HOH HOH . R 9 HOH C 4 304 167 HOH HOH . R 9 HOH C 5 305 248 HOH HOH . R 9 HOH C 6 306 237 HOH HOH . R 9 HOH C 7 307 137 HOH HOH . R 9 HOH C 8 308 189 HOH HOH . R 9 HOH C 9 309 79 HOH HOH . R 9 HOH C 10 310 422 HOH HOH . R 9 HOH C 11 311 421 HOH HOH . R 9 HOH C 12 312 49 HOH HOH . R 9 HOH C 13 313 138 HOH HOH . R 9 HOH C 14 314 246 HOH HOH . R 9 HOH C 15 315 8 HOH HOH . R 9 HOH C 16 316 22 HOH HOH . R 9 HOH C 17 317 153 HOH HOH . R 9 HOH C 18 318 9 HOH HOH . R 9 HOH C 19 319 15 HOH HOH . R 9 HOH C 20 320 67 HOH HOH . R 9 HOH C 21 321 322 HOH HOH . S 9 HOH D 1 301 13 HOH HOH . S 9 HOH D 2 302 48 HOH HOH . S 9 HOH D 3 303 81 HOH HOH . S 9 HOH D 4 304 418 HOH HOH . S 9 HOH D 5 305 131 HOH HOH . S 9 HOH D 6 306 182 HOH HOH . S 9 HOH D 7 307 165 HOH HOH . S 9 HOH D 8 308 308 HOH HOH . T 9 HOH E 1 301 7 HOH HOH . T 9 HOH E 2 302 307 HOH HOH . T 9 HOH E 3 303 172 HOH HOH . T 9 HOH E 4 304 4 HOH HOH . T 9 HOH E 5 305 171 HOH HOH . T 9 HOH E 6 306 140 HOH HOH . T 9 HOH E 7 307 24 HOH HOH . T 9 HOH E 8 308 191 HOH HOH . U 9 HOH F 1 401 61 HOH HOH . U 9 HOH F 2 402 254 HOH HOH . U 9 HOH F 3 403 64 HOH HOH . U 9 HOH F 4 404 133 HOH HOH . U 9 HOH F 5 405 130 HOH HOH . U 9 HOH F 6 406 52 HOH HOH . U 9 HOH F 7 407 98 HOH HOH . U 9 HOH F 8 408 110 HOH HOH . U 9 HOH F 9 409 283 HOH HOH . U 9 HOH F 10 410 27 HOH HOH . U 9 HOH F 11 411 124 HOH HOH . U 9 HOH F 12 412 407 HOH HOH . U 9 HOH F 13 413 105 HOH HOH . U 9 HOH F 14 414 134 HOH HOH . U 9 HOH F 15 415 330 HOH HOH . V 9 HOH G 1 301 301 HOH HOH . V 9 HOH G 2 302 295 HOH HOH . V 9 HOH G 3 303 281 HOH HOH . V 9 HOH G 4 304 116 HOH HOH . V 9 HOH G 5 305 200 HOH HOH . W 9 HOH H 1 301 125 HOH HOH . W 9 HOH H 2 302 420 HOH HOH . W 9 HOH H 3 303 228 HOH HOH . W 9 HOH H 4 304 216 HOH HOH . W 9 HOH H 5 305 35 HOH HOH . W 9 HOH H 6 306 215 HOH HOH . W 9 HOH H 7 307 10 HOH HOH . W 9 HOH H 8 308 106 HOH HOH . W 9 HOH H 9 309 73 HOH HOH . W 9 HOH H 10 310 114 HOH HOH . W 9 HOH H 11 311 213 HOH HOH . W 9 HOH H 12 312 176 HOH HOH . X 9 HOH I 1 101 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . O 8 18.633 -1.191 -26.827 1 64.29 ? S SO4 301 F 1 HETATM 2 O O1 SO4 . . . O 8 19.769 -2.009 -27.248 1 64.3 ? O1 SO4 301 F 1 HETATM 3 O O2 SO4 . . . O 8 17.85 -0.811 -28.001 1 64.28 ? O2 SO4 301 F 1 HETATM 4 O O3 SO4 . . . O 8 17.796 -1.957 -25.904 1 64.2 ? O3 SO4 301 F 1 HETATM 5 O O4 SO4 . . . O 8 19.117 0.016 -26.157 1 64.31 ? O4 SO4 301 F 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 39 _model_server_stats.create_model_time_ms 51 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #