data_4Z9I # _model_server_result.job_id o_Ax8NbyOgXdlHwtNb8fDg _model_server_result.datetime_utc '2024-10-10 07:23:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4z9i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4Z9I # _exptl.entry_id 4Z9I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 133.103 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ASPARTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.02 _cell.angle_gamma 90 _cell.entry_id 4Z9I _cell.length_a 81.46 _cell.length_b 59.51 _cell.length_c 79.38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z9I _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H7 N O4' _chem_comp.formula_weight 133.103 _chem_comp.id ASP _chem_comp.mon_nstd_flag y _chem_comp.name 'ASPARTIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ASP sing 55 n n N H ASP sing 56 n n N H2 ASP sing 57 n n CA C ASP sing 58 n n CA CB ASP sing 59 n n CA HA ASP sing 60 n n C O ASP doub 61 n n C OXT ASP sing 62 n n CB CG ASP sing 63 n n CB HB2 ASP sing 64 n n CB HB3 ASP sing 65 n n CG OD1 ASP doub 66 n n CG OD2 ASP sing 67 n n OD2 HD2 ASP sing 68 n n OXT HXT ASP sing 69 n n # _atom_sites.entry_id 4Z9I _atom_sites.fract_transf_matrix[1][1] 0.012276 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001078 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016804 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012646 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ASP B 1 201 201 ASP ASP . D 3 HOH A 1 201 201 HOH HOH . D 3 HOH A 2 202 202 HOH HOH . D 3 HOH A 3 203 203 HOH HOH . D 3 HOH A 4 204 204 HOH HOH . D 3 HOH A 5 205 205 HOH HOH . D 3 HOH A 6 206 206 HOH HOH . D 3 HOH A 7 207 208 HOH HOH . D 3 HOH A 8 208 207 HOH HOH . D 3 HOH A 9 209 211 HOH HOH . D 3 HOH A 10 210 214 HOH HOH . D 3 HOH A 11 211 210 HOH HOH . D 3 HOH A 12 212 209 HOH HOH . D 3 HOH A 13 213 216 HOH HOH . D 3 HOH A 14 214 215 HOH HOH . D 3 HOH A 15 215 212 HOH HOH . D 3 HOH A 16 216 217 HOH HOH . D 3 HOH A 17 217 220 HOH HOH . D 3 HOH A 18 218 219 HOH HOH . D 3 HOH A 19 219 221 HOH HOH . D 3 HOH A 20 220 227 HOH HOH . D 3 HOH A 21 221 224 HOH HOH . D 3 HOH A 22 222 222 HOH HOH . D 3 HOH A 23 223 225 HOH HOH . D 3 HOH A 24 224 218 HOH HOH . D 3 HOH A 25 225 223 HOH HOH . D 3 HOH A 26 226 226 HOH HOH . D 3 HOH A 27 227 230 HOH HOH . D 3 HOH A 28 228 233 HOH HOH . D 3 HOH A 29 229 232 HOH HOH . D 3 HOH A 30 230 229 HOH HOH . D 3 HOH A 31 231 228 HOH HOH . D 3 HOH A 32 232 231 HOH HOH . D 3 HOH A 33 233 234 HOH HOH . D 3 HOH A 34 234 239 HOH HOH . D 3 HOH A 35 235 238 HOH HOH . D 3 HOH A 36 236 235 HOH HOH . D 3 HOH A 37 237 236 HOH HOH . D 3 HOH A 38 238 247 HOH HOH . D 3 HOH A 39 239 241 HOH HOH . D 3 HOH A 40 240 242 HOH HOH . D 3 HOH A 41 241 243 HOH HOH . D 3 HOH A 42 242 244 HOH HOH . D 3 HOH A 43 243 248 HOH HOH . D 3 HOH A 44 244 246 HOH HOH . D 3 HOH A 45 245 245 HOH HOH . D 3 HOH A 46 246 250 HOH HOH . D 3 HOH A 47 247 240 HOH HOH . D 3 HOH A 48 248 251 HOH HOH . D 3 HOH A 49 249 249 HOH HOH . D 3 HOH A 50 250 252 HOH HOH . D 3 HOH A 51 251 213 HOH HOH . D 3 HOH A 52 252 253 HOH HOH . D 3 HOH A 53 253 254 HOH HOH . D 3 HOH A 54 254 257 HOH HOH . D 3 HOH A 55 255 256 HOH HOH . D 3 HOH A 56 256 260 HOH HOH . D 3 HOH A 57 257 255 HOH HOH . D 3 HOH A 58 258 259 HOH HOH . D 3 HOH A 59 259 258 HOH HOH . D 3 HOH A 60 260 262 HOH HOH . D 3 HOH A 61 261 295 HOH HOH . D 3 HOH A 62 262 263 HOH HOH . D 3 HOH A 63 263 261 HOH HOH . D 3 HOH A 64 264 264 HOH HOH . D 3 HOH A 65 265 266 HOH HOH . D 3 HOH A 66 266 265 HOH HOH . D 3 HOH A 67 267 270 HOH HOH . D 3 HOH A 68 268 267 HOH HOH . D 3 HOH A 69 269 276 HOH HOH . D 3 HOH A 70 270 269 HOH HOH . D 3 HOH A 71 271 271 HOH HOH . D 3 HOH A 72 272 272 HOH HOH . D 3 HOH A 73 273 268 HOH HOH . D 3 HOH A 74 274 275 HOH HOH . D 3 HOH A 75 275 274 HOH HOH . D 3 HOH A 76 276 277 HOH HOH . D 3 HOH A 77 277 279 HOH HOH . D 3 HOH A 78 278 302 HOH HOH . D 3 HOH A 79 279 278 HOH HOH . D 3 HOH A 80 280 273 HOH HOH . D 3 HOH A 81 281 280 HOH HOH . D 3 HOH A 82 282 294 HOH HOH . D 3 HOH A 83 283 282 HOH HOH . D 3 HOH A 84 284 285 HOH HOH . D 3 HOH A 85 285 286 HOH HOH . D 3 HOH A 86 286 284 HOH HOH . D 3 HOH A 87 287 283 HOH HOH . D 3 HOH A 88 288 290 HOH HOH . D 3 HOH A 89 289 291 HOH HOH . D 3 HOH A 90 290 289 HOH HOH . D 3 HOH A 91 291 288 HOH HOH . D 3 HOH A 92 292 287 HOH HOH . D 3 HOH A 93 293 281 HOH HOH . D 3 HOH A 94 294 296 HOH HOH . D 3 HOH A 95 295 298 HOH HOH . D 3 HOH A 96 296 297 HOH HOH . D 3 HOH A 97 297 299 HOH HOH . D 3 HOH A 98 298 292 HOH HOH . D 3 HOH A 99 299 293 HOH HOH . D 3 HOH A 100 300 300 HOH HOH . D 3 HOH A 101 301 303 HOH HOH . D 3 HOH A 102 302 301 HOH HOH . D 3 HOH A 103 303 390 HOH HOH . D 3 HOH A 104 304 306 HOH HOH . D 3 HOH A 105 305 304 HOH HOH . D 3 HOH A 106 306 305 HOH HOH . D 3 HOH A 107 307 308 HOH HOH . D 3 HOH A 108 308 309 HOH HOH . D 3 HOH A 109 309 310 HOH HOH . D 3 HOH A 110 310 307 HOH HOH . D 3 HOH A 111 311 311 HOH HOH . D 3 HOH A 112 312 312 HOH HOH . D 3 HOH A 113 313 313 HOH HOH . D 3 HOH A 114 314 316 HOH HOH . D 3 HOH A 115 315 315 HOH HOH . D 3 HOH A 116 316 314 HOH HOH . D 3 HOH A 117 317 317 HOH HOH . D 3 HOH A 118 318 321 HOH HOH . D 3 HOH A 119 319 319 HOH HOH . D 3 HOH A 120 320 237 HOH HOH . D 3 HOH A 121 321 320 HOH HOH . D 3 HOH A 122 322 318 HOH HOH . D 3 HOH A 123 323 322 HOH HOH . D 3 HOH A 124 324 323 HOH HOH . D 3 HOH A 125 325 324 HOH HOH . D 3 HOH A 126 326 325 HOH HOH . D 3 HOH A 127 327 326 HOH HOH . D 3 HOH A 128 328 328 HOH HOH . D 3 HOH A 129 329 329 HOH HOH . D 3 HOH A 130 330 330 HOH HOH . D 3 HOH A 131 331 331 HOH HOH . D 3 HOH A 132 332 332 HOH HOH . D 3 HOH A 133 333 333 HOH HOH . D 3 HOH A 134 334 327 HOH HOH . D 3 HOH A 135 335 334 HOH HOH . D 3 HOH A 136 336 335 HOH HOH . D 3 HOH A 137 337 336 HOH HOH . D 3 HOH A 138 338 337 HOH HOH . D 3 HOH A 139 339 339 HOH HOH . D 3 HOH A 140 340 338 HOH HOH . D 3 HOH A 141 341 340 HOH HOH . D 3 HOH A 142 342 341 HOH HOH . D 3 HOH A 143 343 343 HOH HOH . D 3 HOH A 144 344 342 HOH HOH . D 3 HOH A 145 345 344 HOH HOH . D 3 HOH A 146 346 345 HOH HOH . D 3 HOH A 147 347 346 HOH HOH . E 3 HOH B 1 301 301 HOH HOH . E 3 HOH B 2 302 302 HOH HOH . E 3 HOH B 3 303 304 HOH HOH . E 3 HOH B 4 304 303 HOH HOH . E 3 HOH B 5 305 305 HOH HOH . E 3 HOH B 6 306 306 HOH HOH . E 3 HOH B 7 307 307 HOH HOH . E 3 HOH B 8 308 311 HOH HOH . E 3 HOH B 9 309 308 HOH HOH . E 3 HOH B 10 310 310 HOH HOH . E 3 HOH B 11 311 309 HOH HOH . E 3 HOH B 12 312 314 HOH HOH . E 3 HOH B 13 313 313 HOH HOH . E 3 HOH B 14 314 312 HOH HOH . E 3 HOH B 15 315 316 HOH HOH . E 3 HOH B 16 316 315 HOH HOH . E 3 HOH B 17 317 317 HOH HOH . E 3 HOH B 18 318 326 HOH HOH . E 3 HOH B 19 319 319 HOH HOH . E 3 HOH B 20 320 322 HOH HOH . E 3 HOH B 21 321 320 HOH HOH . E 3 HOH B 22 322 318 HOH HOH . E 3 HOH B 23 323 321 HOH HOH . E 3 HOH B 24 324 323 HOH HOH . E 3 HOH B 25 325 324 HOH HOH . E 3 HOH B 26 326 325 HOH HOH . E 3 HOH B 27 327 327 HOH HOH . E 3 HOH B 28 328 328 HOH HOH . E 3 HOH B 29 329 338 HOH HOH . E 3 HOH B 30 330 329 HOH HOH . E 3 HOH B 31 331 333 HOH HOH . E 3 HOH B 32 332 332 HOH HOH . E 3 HOH B 33 333 330 HOH HOH . E 3 HOH B 34 334 331 HOH HOH . E 3 HOH B 35 335 335 HOH HOH . E 3 HOH B 36 336 334 HOH HOH . E 3 HOH B 37 337 337 HOH HOH . E 3 HOH B 38 338 336 HOH HOH . E 3 HOH B 39 339 339 HOH HOH . E 3 HOH B 40 340 341 HOH HOH . E 3 HOH B 41 341 342 HOH HOH . E 3 HOH B 42 342 340 HOH HOH . E 3 HOH B 43 343 346 HOH HOH . E 3 HOH B 44 344 344 HOH HOH . E 3 HOH B 45 345 348 HOH HOH . E 3 HOH B 46 346 343 HOH HOH . E 3 HOH B 47 347 350 HOH HOH . E 3 HOH B 48 348 345 HOH HOH . E 3 HOH B 49 349 349 HOH HOH . E 3 HOH B 50 350 347 HOH HOH . E 3 HOH B 51 351 352 HOH HOH . E 3 HOH B 52 352 353 HOH HOH . E 3 HOH B 53 353 356 HOH HOH . E 3 HOH B 54 354 355 HOH HOH . E 3 HOH B 55 355 351 HOH HOH . E 3 HOH B 56 356 354 HOH HOH . E 3 HOH B 57 357 357 HOH HOH . E 3 HOH B 58 358 359 HOH HOH . E 3 HOH B 59 359 368 HOH HOH . E 3 HOH B 60 360 360 HOH HOH . E 3 HOH B 61 361 361 HOH HOH . E 3 HOH B 62 362 362 HOH HOH . E 3 HOH B 63 363 363 HOH HOH . E 3 HOH B 64 364 364 HOH HOH . E 3 HOH B 65 365 358 HOH HOH . E 3 HOH B 66 366 365 HOH HOH . E 3 HOH B 67 367 366 HOH HOH . E 3 HOH B 68 368 369 HOH HOH . E 3 HOH B 69 369 370 HOH HOH . E 3 HOH B 70 370 371 HOH HOH . E 3 HOH B 71 371 367 HOH HOH . E 3 HOH B 72 372 373 HOH HOH . E 3 HOH B 73 373 372 HOH HOH . E 3 HOH B 74 374 374 HOH HOH . E 3 HOH B 75 375 377 HOH HOH . E 3 HOH B 76 376 376 HOH HOH . E 3 HOH B 77 377 375 HOH HOH . E 3 HOH B 78 378 380 HOH HOH . E 3 HOH B 79 379 379 HOH HOH . E 3 HOH B 80 380 382 HOH HOH . E 3 HOH B 81 381 378 HOH HOH . E 3 HOH B 82 382 381 HOH HOH . E 3 HOH B 83 383 385 HOH HOH . E 3 HOH B 84 384 391 HOH HOH . E 3 HOH B 85 385 386 HOH HOH . E 3 HOH B 86 386 384 HOH HOH . E 3 HOH B 87 387 389 HOH HOH . E 3 HOH B 88 388 383 HOH HOH . E 3 HOH B 89 389 392 HOH HOH . E 3 HOH B 90 390 387 HOH HOH . E 3 HOH B 91 391 388 HOH HOH . E 3 HOH B 92 392 394 HOH HOH . E 3 HOH B 93 393 393 HOH HOH . E 3 HOH B 94 394 397 HOH HOH . E 3 HOH B 95 395 395 HOH HOH . E 3 HOH B 96 396 400 HOH HOH . E 3 HOH B 97 397 398 HOH HOH . E 3 HOH B 98 398 401 HOH HOH . E 3 HOH B 99 399 399 HOH HOH . E 3 HOH B 100 400 402 HOH HOH . E 3 HOH B 101 401 403 HOH HOH . E 3 HOH B 102 402 404 HOH HOH . E 3 HOH B 103 403 396 HOH HOH . E 3 HOH B 104 404 405 HOH HOH . E 3 HOH B 105 405 407 HOH HOH . E 3 HOH B 106 406 406 HOH HOH . E 3 HOH B 107 407 408 HOH HOH . E 3 HOH B 108 408 412 HOH HOH . E 3 HOH B 109 409 409 HOH HOH . E 3 HOH B 110 410 410 HOH HOH . E 3 HOH B 111 411 411 HOH HOH . E 3 HOH B 112 412 413 HOH HOH . E 3 HOH B 113 413 415 HOH HOH . E 3 HOH B 114 414 414 HOH HOH . E 3 HOH B 115 415 416 HOH HOH . E 3 HOH B 116 416 417 HOH HOH . E 3 HOH B 117 417 418 HOH HOH . E 3 HOH B 118 418 419 HOH HOH . E 3 HOH B 119 419 420 HOH HOH . E 3 HOH B 120 420 421 HOH HOH . E 3 HOH B 121 421 422 HOH HOH . E 3 HOH B 122 422 423 HOH HOH . E 3 HOH B 123 423 424 HOH HOH . E 3 HOH B 124 424 425 HOH HOH . E 3 HOH B 125 425 426 HOH HOH . E 3 HOH B 126 426 427 HOH HOH . E 3 HOH B 127 427 428 HOH HOH . E 3 HOH B 128 428 429 HOH HOH . E 3 HOH B 129 429 430 HOH HOH . E 3 HOH B 130 430 431 HOH HOH . E 3 HOH B 131 431 434 HOH HOH . E 3 HOH B 132 432 433 HOH HOH . E 3 HOH B 133 433 432 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ASP . . . C 2 11.55 7.085 31.623 1 14.53 ? N ASP 201 B 1 HETATM 2 C CA ASP . . . C 2 12.944 7.373 31.228 1 16.57 ? CA ASP 201 B 1 HETATM 3 C C ASP . . . C 2 13.35 6.645 30.016 1 17.97 ? C ASP 201 B 1 HETATM 4 O O ASP . . . C 2 14.326 7.115 29.382 1 16.38 ? O ASP 201 B 1 HETATM 5 C CB ASP . . . C 2 13.867 7.152 32.361 1 16.02 ? CB ASP 201 B 1 HETATM 6 C CG ASP . . . C 2 13.953 5.666 32.801 1 15.53 ? CG ASP 201 B 1 HETATM 7 O OD1 ASP . . . C 2 12.897 5.067 33.005 1 17.49 ? OD1 ASP 201 B 1 HETATM 8 O OD2 ASP . . . C 2 15.073 5.224 33.044 1 16.37 ? OD2 ASP 201 B 1 HETATM 9 O OXT ASP . . . C 2 12.697 5.635 29.76 1 16.78 ? OXT ASP 201 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #