data_4ZAN # _model_server_result.job_id u7KrEBE05FAK1NJiQYDw7w _model_server_result.datetime_utc '2024-11-07 00:41:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zan # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4ZAN # _exptl.entry_id 4ZAN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 166.112 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Dimethylallyl monophosphate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZAN _cell.length_a 141.73 _cell.length_b 141.73 _cell.length_c 141.73 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZAN _symmetry.cell_setting ? _symmetry.Int_Tables_number 196 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H11 O4 P' _chem_comp.formula_weight 166.112 _chem_comp.id 4LR _chem_comp.mon_nstd_flag . _chem_comp.name 'Dimethylallyl monophosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAC PAJ 4LR doub 1 n n OAE PAJ 4LR sing 2 n n PAJ OAD 4LR sing 3 n n PAJ OAH 4LR sing 4 n n CAG OAH 4LR sing 5 n n CAG CAF 4LR sing 6 n n CAF CAI 4LR doub 7 n n CAB CAI 4LR sing 8 n n CAI CAA 4LR sing 9 n n OAD H1 4LR sing 10 n n OAE H2 4LR sing 11 n n CAG H3 4LR sing 12 n n CAG H4 4LR sing 13 n n CAF H5 4LR sing 14 n n CAB H6 4LR sing 15 n n CAB H7 4LR sing 16 n n CAB H8 4LR sing 17 n n CAA H9 4LR sing 18 n n CAA H10 4LR sing 19 n n CAA H11 4LR sing 20 n n # _atom_sites.entry_id 4ZAN _atom_sites.fract_transf_matrix[1][1] 0.007056 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007056 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007056 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4LR A 1 301 1 4LR DMA . C 3 FMN A 1 302 1 FMN FMN . D 4 SCN A 1 303 1 SCN SCN . E 4 SCN A 1 304 2 SCN SCN . F 5 K A 1 305 3 K K . G 6 HOH A 1 401 32 HOH HOH . G 6 HOH A 2 402 85 HOH HOH . G 6 HOH A 3 403 110 HOH HOH . G 6 HOH A 4 404 112 HOH HOH . G 6 HOH A 5 405 23 HOH HOH . G 6 HOH A 6 406 52 HOH HOH . G 6 HOH A 7 407 97 HOH HOH . G 6 HOH A 8 408 78 HOH HOH . G 6 HOH A 9 409 48 HOH HOH . G 6 HOH A 10 410 17 HOH HOH . G 6 HOH A 11 411 75 HOH HOH . G 6 HOH A 12 412 103 HOH HOH . G 6 HOH A 13 413 82 HOH HOH . G 6 HOH A 14 414 60 HOH HOH . G 6 HOH A 15 415 19 HOH HOH . G 6 HOH A 16 416 56 HOH HOH . G 6 HOH A 17 417 30 HOH HOH . G 6 HOH A 18 418 7 HOH HOH . G 6 HOH A 19 419 5 HOH HOH . G 6 HOH A 20 420 12 HOH HOH . G 6 HOH A 21 421 15 HOH HOH . G 6 HOH A 22 422 86 HOH HOH . G 6 HOH A 23 423 92 HOH HOH . G 6 HOH A 24 424 31 HOH HOH . G 6 HOH A 25 425 55 HOH HOH . G 6 HOH A 26 426 113 HOH HOH . G 6 HOH A 27 427 10 HOH HOH . G 6 HOH A 28 428 65 HOH HOH . G 6 HOH A 29 429 59 HOH HOH . G 6 HOH A 30 430 104 HOH HOH . G 6 HOH A 31 431 89 HOH HOH . G 6 HOH A 32 432 35 HOH HOH . G 6 HOH A 33 433 81 HOH HOH . G 6 HOH A 34 434 22 HOH HOH . G 6 HOH A 35 435 18 HOH HOH . G 6 HOH A 36 436 8 HOH HOH . G 6 HOH A 37 437 98 HOH HOH . G 6 HOH A 38 438 71 HOH HOH . G 6 HOH A 39 439 29 HOH HOH . G 6 HOH A 40 440 26 HOH HOH . G 6 HOH A 41 441 63 HOH HOH . G 6 HOH A 42 442 51 HOH HOH . G 6 HOH A 43 443 20 HOH HOH . G 6 HOH A 44 444 107 HOH HOH . G 6 HOH A 45 445 76 HOH HOH . G 6 HOH A 46 446 28 HOH HOH . G 6 HOH A 47 447 36 HOH HOH . G 6 HOH A 48 448 6 HOH HOH . G 6 HOH A 49 449 21 HOH HOH . G 6 HOH A 50 450 101 HOH HOH . G 6 HOH A 51 451 87 HOH HOH . G 6 HOH A 52 452 16 HOH HOH . G 6 HOH A 53 453 2 HOH HOH . G 6 HOH A 54 454 58 HOH HOH . G 6 HOH A 55 455 94 HOH HOH . G 6 HOH A 56 456 3 HOH HOH . G 6 HOH A 57 457 57 HOH HOH . G 6 HOH A 58 458 64 HOH HOH . G 6 HOH A 59 459 34 HOH HOH . G 6 HOH A 60 460 44 HOH HOH . G 6 HOH A 61 461 37 HOH HOH . G 6 HOH A 62 462 88 HOH HOH . G 6 HOH A 63 463 53 HOH HOH . G 6 HOH A 64 464 46 HOH HOH . G 6 HOH A 65 465 14 HOH HOH . G 6 HOH A 66 466 54 HOH HOH . G 6 HOH A 67 467 25 HOH HOH . G 6 HOH A 68 468 9 HOH HOH . G 6 HOH A 69 469 70 HOH HOH . G 6 HOH A 70 470 11 HOH HOH . G 6 HOH A 71 471 43 HOH HOH . G 6 HOH A 72 472 1 HOH HOH . G 6 HOH A 73 473 61 HOH HOH . G 6 HOH A 74 474 13 HOH HOH . G 6 HOH A 75 475 45 HOH HOH . G 6 HOH A 76 476 40 HOH HOH . G 6 HOH A 77 477 47 HOH HOH . G 6 HOH A 78 478 4 HOH HOH . G 6 HOH A 79 479 90 HOH HOH . G 6 HOH A 80 480 93 HOH HOH . G 6 HOH A 81 481 72 HOH HOH . G 6 HOH A 82 482 91 HOH HOH . G 6 HOH A 83 483 74 HOH HOH . G 6 HOH A 84 484 105 HOH HOH . G 6 HOH A 85 485 41 HOH HOH . G 6 HOH A 86 486 73 HOH HOH . G 6 HOH A 87 487 95 HOH HOH . G 6 HOH A 88 488 33 HOH HOH . G 6 HOH A 89 489 117 HOH HOH . G 6 HOH A 90 490 102 HOH HOH . G 6 HOH A 91 491 66 HOH HOH . G 6 HOH A 92 492 39 HOH HOH . G 6 HOH A 93 493 38 HOH HOH . G 6 HOH A 94 494 99 HOH HOH . G 6 HOH A 95 495 80 HOH HOH . G 6 HOH A 96 496 27 HOH HOH . G 6 HOH A 97 497 83 HOH HOH . G 6 HOH A 98 498 77 HOH HOH . G 6 HOH A 99 499 114 HOH HOH . G 6 HOH A 100 500 84 HOH HOH . G 6 HOH A 101 501 111 HOH HOH . G 6 HOH A 102 502 49 HOH HOH . G 6 HOH A 103 503 24 HOH HOH . G 6 HOH A 104 504 115 HOH HOH . G 6 HOH A 105 505 79 HOH HOH . G 6 HOH A 106 506 50 HOH HOH . G 6 HOH A 107 507 42 HOH HOH . G 6 HOH A 108 508 96 HOH HOH . G 6 HOH A 109 509 108 HOH HOH . G 6 HOH A 110 510 69 HOH HOH . G 6 HOH A 111 511 116 HOH HOH . G 6 HOH A 112 512 68 HOH HOH . G 6 HOH A 113 513 67 HOH HOH . G 6 HOH A 114 514 62 HOH HOH . G 6 HOH A 115 515 106 HOH HOH . G 6 HOH A 116 516 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAD 4LR . . . B 2 0.592 28.377 12.865 1 21.7 ? OAD 4LR 301 A 1 HETATM 2 P PAJ 4LR . . . B 2 -0.527 29.21 12.191 1 23.19 ? PAJ 4LR 301 A 1 HETATM 3 O OAE 4LR . . . B 2 -1.419 28.173 11.428 1 27.88 ? OAE 4LR 301 A 1 HETATM 4 O OAC 4LR . . . B 2 -0.202 30.2 11.117 1 27.15 ? OAC 4LR 301 A 1 HETATM 5 O OAH 4LR . . . B 2 -1.496 29.686 13.409 1 24.86 ? OAH 4LR 301 A 1 HETATM 6 C CAG 4LR . . . B 2 -2.682 30.374 12.993 1 21.42 ? CAG 4LR 301 A 1 HETATM 7 C CAF 4LR . . . B 2 -3.591 30.205 14.209 1 19.32 ? CAF 4LR 301 A 1 HETATM 8 C CAI 4LR . . . B 2 -3.829 31.257 15.183 1 20.39 ? CAI 4LR 301 A 1 HETATM 9 C CAB 4LR . . . B 2 -3.295 32.68 15.016 1 22.88 ? CAB 4LR 301 A 1 HETATM 10 C CAA 4LR . . . B 2 -4.74 30.951 16.349 1 20.57 ? CAA 4LR 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #