data_4ZAV # _model_server_result.job_id RtE-B7P8VCqnYZI86JTu9A _model_server_result.datetime_utc '2024-11-07 00:40:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zav # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 4ZAV # _exptl.entry_id 4ZAV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZAV _cell.length_a 142.18 _cell.length_b 142.18 _cell.length_c 142.18 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZAV _symmetry.cell_setting ? _symmetry.Int_Tables_number 196 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G NA NA . A NA 306 1_555 I O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc2 G NA NA . A NA 306 1_555 I O HOH . A HOH 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc3 G NA NA . A NA 306 1_555 I O HOH . A HOH 461 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc4 G NA NA . A NA 306 1_555 I O HOH . A HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc5 G NA NA . A NA 306 1_555 I O HOH . A HOH 537 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4ZAV _atom_sites.fract_transf_matrix[1][1] 0.007033 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007033 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007033 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4LS A 1 301 1 4LS FMI . C 3 SCN A 1 302 1 SCN SCN . D 3 SCN A 1 303 2 SCN SCN . E 3 SCN A 1 304 4 SCN SCN . F 3 SCN A 1 305 5 SCN SCN . G 4 NA A 1 306 3 NA NA . H 5 PO4 A 1 307 6 PO4 PO4 . I 6 HOH A 1 401 153 HOH HOH . I 6 HOH A 2 402 185 HOH HOH . I 6 HOH A 3 403 119 HOH HOH . I 6 HOH A 4 404 111 HOH HOH . I 6 HOH A 5 405 173 HOH HOH . I 6 HOH A 6 406 205 HOH HOH . I 6 HOH A 7 407 89 HOH HOH . I 6 HOH A 8 408 81 HOH HOH . I 6 HOH A 9 409 69 HOH HOH . I 6 HOH A 10 410 166 HOH HOH . I 6 HOH A 11 411 64 HOH HOH . I 6 HOH A 12 412 209 HOH HOH . I 6 HOH A 13 413 42 HOH HOH . I 6 HOH A 14 414 122 HOH HOH . I 6 HOH A 15 415 143 HOH HOH . I 6 HOH A 16 416 126 HOH HOH . I 6 HOH A 17 417 40 HOH HOH . I 6 HOH A 18 418 84 HOH HOH . I 6 HOH A 19 419 16 HOH HOH . I 6 HOH A 20 420 108 HOH HOH . I 6 HOH A 21 421 32 HOH HOH . I 6 HOH A 22 422 197 HOH HOH . I 6 HOH A 23 423 141 HOH HOH . I 6 HOH A 24 424 184 HOH HOH . I 6 HOH A 25 425 26 HOH HOH . I 6 HOH A 26 426 5 HOH HOH . I 6 HOH A 27 427 45 HOH HOH . I 6 HOH A 28 428 208 HOH HOH . I 6 HOH A 29 429 23 HOH HOH . I 6 HOH A 30 430 8 HOH HOH . I 6 HOH A 31 431 53 HOH HOH . I 6 HOH A 32 432 74 HOH HOH . I 6 HOH A 33 433 86 HOH HOH . I 6 HOH A 34 434 46 HOH HOH . I 6 HOH A 35 435 10 HOH HOH . I 6 HOH A 36 436 104 HOH HOH . I 6 HOH A 37 437 150 HOH HOH . I 6 HOH A 38 438 195 HOH HOH . I 6 HOH A 39 439 210 HOH HOH . I 6 HOH A 40 440 140 HOH HOH . I 6 HOH A 41 441 152 HOH HOH . I 6 HOH A 42 442 44 HOH HOH . I 6 HOH A 43 443 156 HOH HOH . I 6 HOH A 44 444 24 HOH HOH . I 6 HOH A 45 445 29 HOH HOH . I 6 HOH A 46 446 101 HOH HOH . I 6 HOH A 47 447 93 HOH HOH . I 6 HOH A 48 448 48 HOH HOH . I 6 HOH A 49 449 9 HOH HOH . I 6 HOH A 50 450 57 HOH HOH . I 6 HOH A 51 451 13 HOH HOH . I 6 HOH A 52 452 11 HOH HOH . I 6 HOH A 53 453 4 HOH HOH . I 6 HOH A 54 454 20 HOH HOH . I 6 HOH A 55 455 123 HOH HOH . I 6 HOH A 56 456 96 HOH HOH . I 6 HOH A 57 457 72 HOH HOH . I 6 HOH A 58 458 28 HOH HOH . I 6 HOH A 59 459 15 HOH HOH . I 6 HOH A 60 460 71 HOH HOH . I 6 HOH A 61 461 30 HOH HOH . I 6 HOH A 62 462 19 HOH HOH . I 6 HOH A 63 463 100 HOH HOH . I 6 HOH A 64 464 139 HOH HOH . I 6 HOH A 65 465 102 HOH HOH . I 6 HOH A 66 466 58 HOH HOH . I 6 HOH A 67 467 169 HOH HOH . I 6 HOH A 68 468 103 HOH HOH . I 6 HOH A 69 469 132 HOH HOH . I 6 HOH A 70 470 79 HOH HOH . I 6 HOH A 71 471 99 HOH HOH . I 6 HOH A 72 472 7 HOH HOH . I 6 HOH A 73 473 50 HOH HOH . I 6 HOH A 74 474 175 HOH HOH . I 6 HOH A 75 475 188 HOH HOH . I 6 HOH A 76 476 118 HOH HOH . I 6 HOH A 77 477 18 HOH HOH . I 6 HOH A 78 478 128 HOH HOH . I 6 HOH A 79 479 47 HOH HOH . I 6 HOH A 80 480 124 HOH HOH . I 6 HOH A 81 481 67 HOH HOH . I 6 HOH A 82 482 68 HOH HOH . I 6 HOH A 83 483 25 HOH HOH . I 6 HOH A 84 484 35 HOH HOH . I 6 HOH A 85 485 17 HOH HOH . I 6 HOH A 86 486 51 HOH HOH . I 6 HOH A 87 487 66 HOH HOH . I 6 HOH A 88 488 43 HOH HOH . I 6 HOH A 89 489 98 HOH HOH . I 6 HOH A 90 490 176 HOH HOH . I 6 HOH A 91 491 90 HOH HOH . I 6 HOH A 92 492 31 HOH HOH . I 6 HOH A 93 493 41 HOH HOH . I 6 HOH A 94 494 129 HOH HOH . I 6 HOH A 95 495 183 HOH HOH . I 6 HOH A 96 496 75 HOH HOH . I 6 HOH A 97 497 12 HOH HOH . I 6 HOH A 98 498 33 HOH HOH . I 6 HOH A 99 499 63 HOH HOH . I 6 HOH A 100 500 61 HOH HOH . I 6 HOH A 101 501 34 HOH HOH . I 6 HOH A 102 502 59 HOH HOH . I 6 HOH A 103 503 1 HOH HOH . I 6 HOH A 104 504 148 HOH HOH . I 6 HOH A 105 505 138 HOH HOH . I 6 HOH A 106 506 27 HOH HOH . I 6 HOH A 107 507 55 HOH HOH . I 6 HOH A 108 508 49 HOH HOH . I 6 HOH A 109 509 2 HOH HOH . I 6 HOH A 110 510 137 HOH HOH . I 6 HOH A 111 511 83 HOH HOH . I 6 HOH A 112 512 116 HOH HOH . I 6 HOH A 113 513 37 HOH HOH . I 6 HOH A 114 514 135 HOH HOH . I 6 HOH A 115 515 154 HOH HOH . I 6 HOH A 116 516 142 HOH HOH . I 6 HOH A 117 517 189 HOH HOH . I 6 HOH A 118 518 87 HOH HOH . I 6 HOH A 119 519 80 HOH HOH . I 6 HOH A 120 520 130 HOH HOH . I 6 HOH A 121 521 54 HOH HOH . I 6 HOH A 122 522 22 HOH HOH . I 6 HOH A 123 523 39 HOH HOH . I 6 HOH A 124 524 117 HOH HOH . I 6 HOH A 125 525 6 HOH HOH . I 6 HOH A 126 526 204 HOH HOH . I 6 HOH A 127 527 174 HOH HOH . I 6 HOH A 128 528 121 HOH HOH . I 6 HOH A 129 529 65 HOH HOH . I 6 HOH A 130 530 136 HOH HOH . I 6 HOH A 131 531 85 HOH HOH . I 6 HOH A 132 532 73 HOH HOH . I 6 HOH A 133 533 36 HOH HOH . I 6 HOH A 134 534 168 HOH HOH . I 6 HOH A 135 535 82 HOH HOH . I 6 HOH A 136 536 192 HOH HOH . I 6 HOH A 137 537 38 HOH HOH . I 6 HOH A 138 538 171 HOH HOH . I 6 HOH A 139 539 70 HOH HOH . I 6 HOH A 140 540 110 HOH HOH . I 6 HOH A 141 541 112 HOH HOH . I 6 HOH A 142 542 134 HOH HOH . I 6 HOH A 143 543 201 HOH HOH . I 6 HOH A 144 544 198 HOH HOH . I 6 HOH A 145 545 147 HOH HOH . I 6 HOH A 146 546 125 HOH HOH . I 6 HOH A 147 547 206 HOH HOH . I 6 HOH A 148 548 133 HOH HOH . I 6 HOH A 149 549 107 HOH HOH . I 6 HOH A 150 550 60 HOH HOH . I 6 HOH A 151 551 3 HOH HOH . I 6 HOH A 152 552 194 HOH HOH . I 6 HOH A 153 553 165 HOH HOH . I 6 HOH A 154 554 76 HOH HOH . I 6 HOH A 155 555 97 HOH HOH . I 6 HOH A 156 556 177 HOH HOH . I 6 HOH A 157 557 56 HOH HOH . I 6 HOH A 158 558 14 HOH HOH . I 6 HOH A 159 559 191 HOH HOH . I 6 HOH A 160 560 187 HOH HOH . I 6 HOH A 161 561 77 HOH HOH . I 6 HOH A 162 562 190 HOH HOH . I 6 HOH A 163 563 91 HOH HOH . I 6 HOH A 164 564 167 HOH HOH . I 6 HOH A 165 565 78 HOH HOH . I 6 HOH A 166 566 181 HOH HOH . I 6 HOH A 167 567 149 HOH HOH . I 6 HOH A 168 568 202 HOH HOH . I 6 HOH A 169 569 145 HOH HOH . I 6 HOH A 170 570 200 HOH HOH . I 6 HOH A 171 571 196 HOH HOH . I 6 HOH A 172 572 182 HOH HOH . I 6 HOH A 173 573 157 HOH HOH . I 6 HOH A 174 574 180 HOH HOH . I 6 HOH A 175 575 105 HOH HOH . I 6 HOH A 176 576 207 HOH HOH . I 6 HOH A 177 577 172 HOH HOH . I 6 HOH A 178 578 193 HOH HOH . I 6 HOH A 179 579 94 HOH HOH . I 6 HOH A 180 580 203 HOH HOH . I 6 HOH A 181 581 144 HOH HOH . I 6 HOH A 182 582 120 HOH HOH . I 6 HOH A 183 583 114 HOH HOH . I 6 HOH A 184 584 113 HOH HOH . I 6 HOH A 185 585 155 HOH HOH . I 6 HOH A 186 586 131 HOH HOH . I 6 HOH A 187 587 199 HOH HOH . I 6 HOH A 188 588 178 HOH HOH . I 6 HOH A 189 589 186 HOH HOH . I 6 HOH A 190 590 164 HOH HOH . I 6 HOH A 191 591 146 HOH HOH . I 6 HOH A 192 592 170 HOH HOH . I 6 HOH A 193 593 151 HOH HOH . I 6 HOH A 194 594 179 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 13.806 _atom_site.Cartn_y 20.774 _atom_site.Cartn_z -13.404 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 15.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 306 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 398 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 1 #