data_4ZBI # _model_server_result.job_id xGaaCLirK5-asJohEbmzUQ _model_server_result.datetime_utc '2024-12-03 04:38:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zbi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":400}' # _entry.id 4ZBI # _exptl.entry_id 4ZBI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 385.455 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-[3-(naphthalen-1-yloxy)propyl]-5,6-dihydro-4H-pyrrolo[3,2,1-ij]quinoline-2-carboxylic acid' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.65 _cell.angle_gamma 90 _cell.entry_id 4ZBI _cell.length_a 62.256 _cell.length_b 134.015 _cell.length_c 135.931 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZBI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 PISA monomeric 1 author_and_software_defined_assembly 7 PISA monomeric 1 author_and_software_defined_assembly 8 PISA monomeric 1 author_and_software_defined_assembly 9 PISA monomeric 1 author_and_software_defined_assembly 10 PISA monomeric 1 author_and_software_defined_assembly 11 PISA monomeric 1 author_and_software_defined_assembly 12 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,M,Y 1 1 B,N,Z 2 1 C,O,AA 3 1 D,P,BA 4 1 E,Q,CA 5 1 F,R,DA 6 1 G,S,EA 7 1 H,T,FA 8 1 I,U,GA 9 1 J,V,HA 10 1 K,W,IA 11 1 L,X,JA 12 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N # _chem_comp.formula 'C25 H23 N O3' _chem_comp.formula_weight 385.455 _chem_comp.id 4M6 _chem_comp.mon_nstd_flag . _chem_comp.name '1-[3-(naphthalen-1-yloxy)propyl]-5,6-dihydro-4H-pyrrolo[3,2,1-ij]quinoline-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAI CAC 4M6 doub 1 n y CAI CAY 4M6 sing 2 n y CAJ CAY 4M6 doub 3 n y CAJ CAF 4M6 sing 4 n y CAC CAD 4M6 sing 5 n y CAY CAZ 4M6 sing 6 n y CAF CAH 4M6 doub 7 n y CAD CAK 4M6 doub 8 n y CAZ CAK 4M6 sing 9 n y CAZ CAV 4M6 doub 10 n y CAH CAV 4M6 sing 11 n y CAV OAS 4M6 sing 12 n n OAS CAO 4M6 sing 13 n n CAO CAM 4M6 sing 14 n n CAM CAQ 4M6 sing 15 n n CAQ CAW 4M6 sing 16 n n OAB CAT 4M6 doub 17 n n CAW CBA 4M6 sing 18 n y CAW CAX 4M6 doub 19 n y CAL CBA 4M6 doub 20 n y CAL CAE 4M6 sing 21 n y CBA CBB 4M6 sing 22 n y CAT CAX 4M6 sing 23 n n CAT OAA 4M6 sing 24 n n CAE CAG 4M6 doub 25 n y CAX NBC 4M6 sing 26 n y CBB NBC 4M6 sing 27 n y CBB CAU 4M6 doub 28 n y NBC CAR 4M6 sing 29 n n CAG CAU 4M6 sing 30 n y CAU CAP 4M6 sing 31 n n CAR CAN 4M6 sing 32 n n CAN CAP 4M6 sing 33 n n OAA H1 4M6 sing 34 n n CAR H2 4M6 sing 35 n n CAR H3 4M6 sing 36 n n CAN H4 4M6 sing 37 n n CAN H5 4M6 sing 38 n n CAP H6 4M6 sing 39 n n CAP H7 4M6 sing 40 n n CAG H8 4M6 sing 41 n n CAE H9 4M6 sing 42 n n CAL H10 4M6 sing 43 n n CAQ H11 4M6 sing 44 n n CAQ H12 4M6 sing 45 n n CAM H13 4M6 sing 46 n n CAM H14 4M6 sing 47 n n CAO H15 4M6 sing 48 n n CAO H16 4M6 sing 49 n n CAK H17 4M6 sing 50 n n CAD H18 4M6 sing 51 n n CAC H19 4M6 sing 52 n n CAI H20 4M6 sing 53 n n CAJ H21 4M6 sing 54 n n CAF H22 4M6 sing 55 n n CAH H23 4M6 sing 56 n n # _atom_sites.entry_id 4ZBI _atom_sites.fract_transf_matrix[1][1] 0.016063 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002731 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007462 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 4M6 A 1 400 400 4M6 DRG . N 2 4M6 B 1 400 400 4M6 DRG . O 2 4M6 C 1 400 400 4M6 DRG . P 2 4M6 D 1 400 400 4M6 DRG . Q 2 4M6 E 1 400 400 4M6 DRG . R 2 4M6 F 1 400 400 4M6 DRG . S 2 4M6 G 1 400 400 4M6 DRG . T 2 4M6 H 1 400 400 4M6 DRG . U 2 4M6 I 1 400 400 4M6 DRG . V 2 4M6 J 1 400 400 4M6 DRG . W 2 4M6 K 1 400 400 4M6 DRG . X 2 4M6 L 1 400 400 4M6 DRG . Y 3 HOH A 1 501 7 HOH HOH . Y 3 HOH A 2 502 38 HOH HOH . Y 3 HOH A 3 503 111 HOH HOH . Y 3 HOH A 4 504 50 HOH HOH . Y 3 HOH A 5 505 69 HOH HOH . Y 3 HOH A 6 506 164 HOH HOH . Y 3 HOH A 7 507 89 HOH HOH . Y 3 HOH A 8 508 113 HOH HOH . Y 3 HOH A 9 509 18 HOH HOH . Y 3 HOH A 10 510 57 HOH HOH . Y 3 HOH A 11 511 33 HOH HOH . Y 3 HOH A 12 512 46 HOH HOH . Y 3 HOH A 13 513 58 HOH HOH . Y 3 HOH A 14 514 168 HOH HOH . Y 3 HOH A 15 515 108 HOH HOH . Y 3 HOH A 16 516 107 HOH HOH . Z 3 HOH B 1 501 161 HOH HOH . Z 3 HOH B 2 502 66 HOH HOH . Z 3 HOH B 3 503 62 HOH HOH . Z 3 HOH B 4 504 76 HOH HOH . Z 3 HOH B 5 505 156 HOH HOH . Z 3 HOH B 6 506 56 HOH HOH . Z 3 HOH B 7 507 11 HOH HOH . Z 3 HOH B 8 508 48 HOH HOH . Z 3 HOH B 9 509 175 HOH HOH . Z 3 HOH B 10 510 155 HOH HOH . Z 3 HOH B 11 511 6 HOH HOH . Z 3 HOH B 12 512 169 HOH HOH . Z 3 HOH B 13 513 138 HOH HOH . Z 3 HOH B 14 514 145 HOH HOH . Z 3 HOH B 15 515 137 HOH HOH . Z 3 HOH B 16 516 94 HOH HOH . Z 3 HOH B 17 517 12 HOH HOH . AA 3 HOH C 1 501 157 HOH HOH . AA 3 HOH C 2 502 32 HOH HOH . AA 3 HOH C 3 503 129 HOH HOH . AA 3 HOH C 4 504 47 HOH HOH . AA 3 HOH C 5 505 22 HOH HOH . AA 3 HOH C 6 506 159 HOH HOH . AA 3 HOH C 7 507 176 HOH HOH . AA 3 HOH C 8 508 52 HOH HOH . AA 3 HOH C 9 509 14 HOH HOH . AA 3 HOH C 10 510 82 HOH HOH . AA 3 HOH C 11 511 75 HOH HOH . AA 3 HOH C 12 512 60 HOH HOH . AA 3 HOH C 13 513 85 HOH HOH . AA 3 HOH C 14 514 88 HOH HOH . AA 3 HOH C 15 515 24 HOH HOH . AA 3 HOH C 16 516 171 HOH HOH . BA 3 HOH D 1 501 154 HOH HOH . BA 3 HOH D 2 502 26 HOH HOH . BA 3 HOH D 3 503 165 HOH HOH . BA 3 HOH D 4 504 15 HOH HOH . BA 3 HOH D 5 505 65 HOH HOH . BA 3 HOH D 6 506 59 HOH HOH . BA 3 HOH D 7 507 4 HOH HOH . BA 3 HOH D 8 508 119 HOH HOH . BA 3 HOH D 9 509 54 HOH HOH . BA 3 HOH D 10 510 139 HOH HOH . BA 3 HOH D 11 511 95 HOH HOH . BA 3 HOH D 12 512 25 HOH HOH . BA 3 HOH D 13 513 141 HOH HOH . BA 3 HOH D 14 514 51 HOH HOH . BA 3 HOH D 15 515 98 HOH HOH . BA 3 HOH D 16 516 84 HOH HOH . BA 3 HOH D 17 517 70 HOH HOH . BA 3 HOH D 18 518 121 HOH HOH . BA 3 HOH D 19 519 21 HOH HOH . BA 3 HOH D 20 520 63 HOH HOH . BA 3 HOH D 21 521 170 HOH HOH . BA 3 HOH D 22 522 133 HOH HOH . BA 3 HOH D 23 523 123 HOH HOH . BA 3 HOH D 24 524 34 HOH HOH . BA 3 HOH D 25 525 28 HOH HOH . CA 3 HOH E 1 501 53 HOH HOH . CA 3 HOH E 2 502 162 HOH HOH . CA 3 HOH E 3 503 160 HOH HOH . CA 3 HOH E 4 504 127 HOH HOH . CA 3 HOH E 5 505 37 HOH HOH . CA 3 HOH E 6 506 31 HOH HOH . CA 3 HOH E 7 507 149 HOH HOH . CA 3 HOH E 8 508 17 HOH HOH . CA 3 HOH E 9 509 71 HOH HOH . CA 3 HOH E 10 510 64 HOH HOH . CA 3 HOH E 11 511 125 HOH HOH . CA 3 HOH E 12 512 86 HOH HOH . CA 3 HOH E 13 513 101 HOH HOH . CA 3 HOH E 14 514 150 HOH HOH . CA 3 HOH E 15 515 105 HOH HOH . CA 3 HOH E 16 516 41 HOH HOH . CA 3 HOH E 17 517 151 HOH HOH . CA 3 HOH E 18 518 49 HOH HOH . CA 3 HOH E 19 519 72 HOH HOH . DA 3 HOH F 1 501 117 HOH HOH . DA 3 HOH F 2 502 126 HOH HOH . DA 3 HOH F 3 503 9 HOH HOH . DA 3 HOH F 4 504 79 HOH HOH . DA 3 HOH F 5 505 20 HOH HOH . DA 3 HOH F 6 506 124 HOH HOH . EA 3 HOH G 1 501 142 HOH HOH . EA 3 HOH G 2 502 148 HOH HOH . EA 3 HOH G 3 503 104 HOH HOH . EA 3 HOH G 4 504 99 HOH HOH . EA 3 HOH G 5 505 42 HOH HOH . EA 3 HOH G 6 506 13 HOH HOH . EA 3 HOH G 7 507 146 HOH HOH . EA 3 HOH G 8 508 106 HOH HOH . FA 3 HOH H 1 501 8 HOH HOH . FA 3 HOH H 2 502 45 HOH HOH . FA 3 HOH H 3 503 67 HOH HOH . FA 3 HOH H 4 504 23 HOH HOH . FA 3 HOH H 5 505 80 HOH HOH . FA 3 HOH H 6 506 74 HOH HOH . FA 3 HOH H 7 507 40 HOH HOH . FA 3 HOH H 8 508 163 HOH HOH . FA 3 HOH H 9 509 132 HOH HOH . FA 3 HOH H 10 510 81 HOH HOH . FA 3 HOH H 11 511 112 HOH HOH . FA 3 HOH H 12 512 143 HOH HOH . FA 3 HOH H 13 513 116 HOH HOH . GA 3 HOH I 1 501 16 HOH HOH . GA 3 HOH I 2 502 118 HOH HOH . GA 3 HOH I 3 503 97 HOH HOH . GA 3 HOH I 4 504 100 HOH HOH . GA 3 HOH I 5 505 44 HOH HOH . GA 3 HOH I 6 506 144 HOH HOH . GA 3 HOH I 7 507 83 HOH HOH . GA 3 HOH I 8 508 167 HOH HOH . GA 3 HOH I 9 509 30 HOH HOH . GA 3 HOH I 10 510 174 HOH HOH . GA 3 HOH I 11 511 39 HOH HOH . GA 3 HOH I 12 512 128 HOH HOH . GA 3 HOH I 13 513 158 HOH HOH . GA 3 HOH I 14 514 10 HOH HOH . GA 3 HOH I 15 515 90 HOH HOH . GA 3 HOH I 16 516 177 HOH HOH . GA 3 HOH I 17 517 43 HOH HOH . GA 3 HOH I 18 518 68 HOH HOH . GA 3 HOH I 19 519 114 HOH HOH . GA 3 HOH I 20 520 87 HOH HOH . GA 3 HOH I 21 521 27 HOH HOH . GA 3 HOH I 22 522 91 HOH HOH . GA 3 HOH I 23 523 172 HOH HOH . HA 3 HOH J 1 501 29 HOH HOH . HA 3 HOH J 2 502 36 HOH HOH . HA 3 HOH J 3 503 55 HOH HOH . HA 3 HOH J 4 504 130 HOH HOH . HA 3 HOH J 5 505 120 HOH HOH . HA 3 HOH J 6 506 19 HOH HOH . HA 3 HOH J 7 507 78 HOH HOH . HA 3 HOH J 8 508 131 HOH HOH . HA 3 HOH J 9 509 2 HOH HOH . HA 3 HOH J 10 510 103 HOH HOH . HA 3 HOH J 11 511 153 HOH HOH . HA 3 HOH J 12 512 122 HOH HOH . IA 3 HOH K 1 501 61 HOH HOH . IA 3 HOH K 2 502 35 HOH HOH . IA 3 HOH K 3 503 152 HOH HOH . IA 3 HOH K 4 504 93 HOH HOH . IA 3 HOH K 5 505 134 HOH HOH . IA 3 HOH K 6 506 92 HOH HOH . IA 3 HOH K 7 507 110 HOH HOH . IA 3 HOH K 8 508 3 HOH HOH . IA 3 HOH K 9 509 173 HOH HOH . IA 3 HOH K 10 510 136 HOH HOH . IA 3 HOH K 11 511 77 HOH HOH . JA 3 HOH L 1 501 96 HOH HOH . JA 3 HOH L 2 502 166 HOH HOH . JA 3 HOH L 3 503 115 HOH HOH . JA 3 HOH L 4 504 1 HOH HOH . JA 3 HOH L 5 505 102 HOH HOH . JA 3 HOH L 6 506 73 HOH HOH . JA 3 HOH L 7 507 5 HOH HOH . JA 3 HOH L 8 508 109 HOH HOH . JA 3 HOH L 9 509 147 HOH HOH . JA 3 HOH L 10 510 135 HOH HOH . JA 3 HOH L 11 511 140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAA 4M6 . . . N 2 2.441 -7.574 11.336 1 74.72 ? OAA 4M6 400 B 1 HETATM 2 C CAT 4M6 . . . N 2 2.779 -8.177 10.287 1 56.04 ? CAT 4M6 400 B 1 HETATM 3 O OAB 4M6 . . . N 2 2.397 -7.759 9.175 1 60.08 ? OAB 4M6 400 B 1 HETATM 4 C CAX 4M6 . . . N 2 3.691 -9.389 10.375 1 56.12 ? CAX 4M6 400 B 1 HETATM 5 N NBC 4M6 . . . N 2 3.454 -10.559 11.05 1 45.8 ? NBC 4M6 400 B 1 HETATM 6 C CBB 4M6 . . . N 2 4.502 -11.354 10.888 1 22.31 ? CBB 4M6 400 B 1 HETATM 7 C CAR 4M6 . . . N 2 2.282 -11.004 11.875 1 53.52 ? CAR 4M6 400 B 1 HETATM 8 C CAN 4M6 . . . N 2 2.216 -12.535 12.104 1 40.38 ? CAN 4M6 400 B 1 HETATM 9 C CAP 4M6 . . . N 2 3.561 -13.221 12.271 1 41.64 ? CAP 4M6 400 B 1 HETATM 10 C CAU 4M6 . . . N 2 4.663 -12.606 11.397 1 25.61 ? CAU 4M6 400 B 1 HETATM 11 C CAG 4M6 . . . N 2 5.863 -13.287 11.101 1 40.25 ? CAG 4M6 400 B 1 HETATM 12 C CAE 4M6 . . . N 2 6.862 -12.68 10.304 1 43.61 ? CAE 4M6 400 B 1 HETATM 13 C CAL 4M6 . . . N 2 6.679 -11.395 9.793 1 29.67 ? CAL 4M6 400 B 1 HETATM 14 C CBA 4M6 . . . N 2 5.474 -10.744 10.093 1 43.26 ? CBA 4M6 400 B 1 HETATM 15 C CAW 4M6 . . . N 2 4.948 -9.465 9.755 1 40.63 ? CAW 4M6 400 B 1 HETATM 16 C CAQ 4M6 . . . N 2 5.611 -8.392 8.899 1 30.99 ? CAQ 4M6 400 B 1 HETATM 17 C CAM 4M6 . . . N 2 5.047 -8.332 7.48 1 39.87 ? CAM 4M6 400 B 1 HETATM 18 C CAO 4M6 . . . N 2 5.214 -9.648 6.718 1 22.17 ? CAO 4M6 400 B 1 HETATM 19 O OAS 4M6 . . . N 2 6.585 -9.808 6.504 1 27.05 ? OAS 4M6 400 B 1 HETATM 20 C CAV 4M6 . . . N 2 6.945 -10.918 5.756 1 31.03 ? CAV 4M6 400 B 1 HETATM 21 C CAZ 4M6 . . . N 2 8.28 -11.026 5.355 1 41.77 ? CAZ 4M6 400 B 1 HETATM 22 C CAK 4M6 . . . N 2 9.195 -10.02 5.722 1 44.93 ? CAK 4M6 400 B 1 HETATM 23 C CAD 4M6 . . . N 2 10.533 -10.118 5.325 1 36.76 ? CAD 4M6 400 B 1 HETATM 24 C CAC 4M6 . . . N 2 10.949 -11.226 4.58 1 21.94 ? CAC 4M6 400 B 1 HETATM 25 C CAI 4M6 . . . N 2 10.032 -12.21 4.218 1 13 ? CAI 4M6 400 B 1 HETATM 26 C CAY 4M6 . . . N 2 8.683 -12.105 4.612 1 32.37 ? CAY 4M6 400 B 1 HETATM 27 C CAJ 4M6 . . . N 2 7.748 -13.093 4.265 1 13.14 ? CAJ 4M6 400 B 1 HETATM 28 C CAF 4M6 . . . N 2 6.426 -12.982 4.663 1 23.38 ? CAF 4M6 400 B 1 HETATM 29 C CAH 4M6 . . . N 2 6.019 -11.888 5.413 1 37.84 ? CAH 4M6 400 B 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #