data_4ZCE # _model_server_result.job_id XA9SmhEJEg9lzA99v9GMMA _model_server_result.datetime_utc '2024-12-26 20:14:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zce # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 4ZCE # _exptl.entry_id 4ZCE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.47 _cell.angle_gamma 90 _cell.entry_id 4ZCE _cell.length_a 25.283 _cell.length_b 53.519 _cell.length_c 40.395 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZCE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 47 1_555 A SG CYS 26 A CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf2 A SG CYS 36 A CYS 76 1_555 A SG CYS 49 A CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf3 B SG CYS 7 B CYS 47 1_555 B SG CYS 26 B CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf4 B SG CYS 36 B CYS 76 1_555 B SG CYS 49 B CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4ZCE _atom_sites.fract_transf_matrix[1][1] 0.039552 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003788 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018685 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024869 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 101 1 EDO EDO . D 3 HOH A 1 201 58 HOH HOH . D 3 HOH A 2 202 139 HOH HOH . D 3 HOH A 3 203 163 HOH HOH . D 3 HOH A 4 204 44 HOH HOH . D 3 HOH A 5 205 68 HOH HOH . D 3 HOH A 6 206 174 HOH HOH . D 3 HOH A 7 207 197 HOH HOH . D 3 HOH A 8 208 70 HOH HOH . D 3 HOH A 9 209 27 HOH HOH . D 3 HOH A 10 210 103 HOH HOH . D 3 HOH A 11 211 157 HOH HOH . D 3 HOH A 12 212 133 HOH HOH . D 3 HOH A 13 213 123 HOH HOH . D 3 HOH A 14 214 148 HOH HOH . D 3 HOH A 15 215 186 HOH HOH . D 3 HOH A 16 216 63 HOH HOH . D 3 HOH A 17 217 3 HOH HOH . D 3 HOH A 18 218 64 HOH HOH . D 3 HOH A 19 219 55 HOH HOH . D 3 HOH A 20 220 47 HOH HOH . D 3 HOH A 21 221 137 HOH HOH . D 3 HOH A 22 222 2 HOH HOH . D 3 HOH A 23 223 117 HOH HOH . D 3 HOH A 24 224 28 HOH HOH . D 3 HOH A 25 225 105 HOH HOH . D 3 HOH A 26 226 201 HOH HOH . D 3 HOH A 27 227 8 HOH HOH . D 3 HOH A 28 228 4 HOH HOH . D 3 HOH A 29 229 39 HOH HOH . D 3 HOH A 30 230 21 HOH HOH . D 3 HOH A 31 231 141 HOH HOH . D 3 HOH A 32 232 65 HOH HOH . D 3 HOH A 33 233 76 HOH HOH . D 3 HOH A 34 234 24 HOH HOH . D 3 HOH A 35 235 75 HOH HOH . D 3 HOH A 36 236 86 HOH HOH . D 3 HOH A 37 237 78 HOH HOH . D 3 HOH A 38 238 156 HOH HOH . D 3 HOH A 39 239 42 HOH HOH . D 3 HOH A 40 240 45 HOH HOH . D 3 HOH A 41 241 190 HOH HOH . D 3 HOH A 42 242 185 HOH HOH . D 3 HOH A 43 243 198 HOH HOH . D 3 HOH A 44 244 179 HOH HOH . D 3 HOH A 45 245 38 HOH HOH . D 3 HOH A 46 246 195 HOH HOH . D 3 HOH A 47 247 85 HOH HOH . D 3 HOH A 48 248 194 HOH HOH . D 3 HOH A 49 249 11 HOH HOH . D 3 HOH A 50 250 183 HOH HOH . D 3 HOH A 51 251 34 HOH HOH . D 3 HOH A 52 252 184 HOH HOH . D 3 HOH A 53 253 40 HOH HOH . D 3 HOH A 54 254 7 HOH HOH . D 3 HOH A 55 255 51 HOH HOH . D 3 HOH A 56 256 89 HOH HOH . D 3 HOH A 57 257 125 HOH HOH . D 3 HOH A 58 258 6 HOH HOH . D 3 HOH A 59 259 57 HOH HOH . D 3 HOH A 60 260 48 HOH HOH . D 3 HOH A 61 261 49 HOH HOH . D 3 HOH A 62 262 181 HOH HOH . D 3 HOH A 63 263 165 HOH HOH . D 3 HOH A 64 264 199 HOH HOH . D 3 HOH A 65 265 97 HOH HOH . D 3 HOH A 66 266 104 HOH HOH . D 3 HOH A 67 267 154 HOH HOH . D 3 HOH A 68 268 200 HOH HOH . D 3 HOH A 69 269 182 HOH HOH . D 3 HOH A 70 270 147 HOH HOH . D 3 HOH A 71 271 84 HOH HOH . D 3 HOH A 72 272 83 HOH HOH . D 3 HOH A 73 273 98 HOH HOH . D 3 HOH A 74 274 149 HOH HOH . D 3 HOH A 75 275 115 HOH HOH . D 3 HOH A 76 276 122 HOH HOH . D 3 HOH A 77 277 50 HOH HOH . D 3 HOH A 78 278 192 HOH HOH . D 3 HOH A 79 279 155 HOH HOH . D 3 HOH A 80 280 152 HOH HOH . D 3 HOH A 81 281 16 HOH HOH . D 3 HOH A 82 282 74 HOH HOH . D 3 HOH A 83 283 161 HOH HOH . D 3 HOH A 84 284 145 HOH HOH . D 3 HOH A 85 285 164 HOH HOH . D 3 HOH A 86 286 143 HOH HOH . D 3 HOH A 87 287 134 HOH HOH . D 3 HOH A 88 288 188 HOH HOH . D 3 HOH A 89 289 162 HOH HOH . D 3 HOH A 90 290 126 HOH HOH . D 3 HOH A 91 291 144 HOH HOH . D 3 HOH A 92 292 61 HOH HOH . D 3 HOH A 93 293 169 HOH HOH . D 3 HOH A 94 294 177 HOH HOH . D 3 HOH A 95 295 135 HOH HOH . D 3 HOH A 96 296 176 HOH HOH . E 3 HOH B 1 101 150 HOH HOH . E 3 HOH B 2 102 193 HOH HOH . E 3 HOH B 3 103 114 HOH HOH . E 3 HOH B 4 104 102 HOH HOH . E 3 HOH B 5 105 167 HOH HOH . E 3 HOH B 6 106 10 HOH HOH . E 3 HOH B 7 107 189 HOH HOH . E 3 HOH B 8 108 127 HOH HOH . E 3 HOH B 9 109 99 HOH HOH . E 3 HOH B 10 110 87 HOH HOH . E 3 HOH B 11 111 80 HOH HOH . E 3 HOH B 12 112 5 HOH HOH . E 3 HOH B 13 113 25 HOH HOH . E 3 HOH B 14 114 69 HOH HOH . E 3 HOH B 15 115 26 HOH HOH . E 3 HOH B 16 116 116 HOH HOH . E 3 HOH B 17 117 52 HOH HOH . E 3 HOH B 18 118 113 HOH HOH . E 3 HOH B 19 119 172 HOH HOH . E 3 HOH B 20 120 60 HOH HOH . E 3 HOH B 21 121 101 HOH HOH . E 3 HOH B 22 122 12 HOH HOH . E 3 HOH B 23 123 107 HOH HOH . E 3 HOH B 24 124 160 HOH HOH . E 3 HOH B 25 125 37 HOH HOH . E 3 HOH B 26 126 13 HOH HOH . E 3 HOH B 27 127 111 HOH HOH . E 3 HOH B 28 128 79 HOH HOH . E 3 HOH B 29 129 72 HOH HOH . E 3 HOH B 30 130 93 HOH HOH . E 3 HOH B 31 131 180 HOH HOH . E 3 HOH B 32 132 92 HOH HOH . E 3 HOH B 33 133 19 HOH HOH . E 3 HOH B 34 134 18 HOH HOH . E 3 HOH B 35 135 31 HOH HOH . E 3 HOH B 36 136 158 HOH HOH . E 3 HOH B 37 137 23 HOH HOH . E 3 HOH B 38 138 17 HOH HOH . E 3 HOH B 39 139 128 HOH HOH . E 3 HOH B 40 140 168 HOH HOH . E 3 HOH B 41 141 32 HOH HOH . E 3 HOH B 42 142 73 HOH HOH . E 3 HOH B 43 143 1 HOH HOH . E 3 HOH B 44 144 29 HOH HOH . E 3 HOH B 45 145 67 HOH HOH . E 3 HOH B 46 146 22 HOH HOH . E 3 HOH B 47 147 130 HOH HOH . E 3 HOH B 48 148 53 HOH HOH . E 3 HOH B 49 149 43 HOH HOH . E 3 HOH B 50 150 100 HOH HOH . E 3 HOH B 51 151 82 HOH HOH . E 3 HOH B 52 152 14 HOH HOH . E 3 HOH B 53 153 77 HOH HOH . E 3 HOH B 54 154 30 HOH HOH . E 3 HOH B 55 155 96 HOH HOH . E 3 HOH B 56 156 20 HOH HOH . E 3 HOH B 57 157 9 HOH HOH . E 3 HOH B 58 158 46 HOH HOH . E 3 HOH B 59 159 33 HOH HOH . E 3 HOH B 60 160 153 HOH HOH . E 3 HOH B 61 161 54 HOH HOH . E 3 HOH B 62 162 35 HOH HOH . E 3 HOH B 63 163 187 HOH HOH . E 3 HOH B 64 164 36 HOH HOH . E 3 HOH B 65 165 131 HOH HOH . E 3 HOH B 66 166 175 HOH HOH . E 3 HOH B 67 167 120 HOH HOH . E 3 HOH B 68 168 88 HOH HOH . E 3 HOH B 69 169 41 HOH HOH . E 3 HOH B 70 170 178 HOH HOH . E 3 HOH B 71 171 106 HOH HOH . E 3 HOH B 72 172 138 HOH HOH . E 3 HOH B 73 173 146 HOH HOH . E 3 HOH B 74 174 112 HOH HOH . E 3 HOH B 75 175 170 HOH HOH . E 3 HOH B 76 176 109 HOH HOH . E 3 HOH B 77 177 66 HOH HOH . E 3 HOH B 78 178 140 HOH HOH . E 3 HOH B 79 179 91 HOH HOH . E 3 HOH B 80 180 136 HOH HOH . E 3 HOH B 81 181 151 HOH HOH . E 3 HOH B 82 182 71 HOH HOH . E 3 HOH B 83 183 56 HOH HOH . E 3 HOH B 84 184 81 HOH HOH . E 3 HOH B 85 185 196 HOH HOH . E 3 HOH B 86 186 166 HOH HOH . E 3 HOH B 87 187 95 HOH HOH . E 3 HOH B 88 188 94 HOH HOH . E 3 HOH B 89 189 62 HOH HOH . E 3 HOH B 90 190 159 HOH HOH . E 3 HOH B 91 191 121 HOH HOH . E 3 HOH B 92 192 15 HOH HOH . E 3 HOH B 93 193 108 HOH HOH . E 3 HOH B 94 194 129 HOH HOH . E 3 HOH B 95 195 119 HOH HOH . E 3 HOH B 96 196 173 HOH HOH . E 3 HOH B 97 197 171 HOH HOH . E 3 HOH B 98 198 90 HOH HOH . E 3 HOH B 99 199 132 HOH HOH . E 3 HOH B 100 200 110 HOH HOH . E 3 HOH B 101 201 59 HOH HOH . E 3 HOH B 102 202 142 HOH HOH . E 3 HOH B 103 203 124 HOH HOH . E 3 HOH B 104 204 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 -6.124 -0.912 13.826 1 38.73 ? C1 EDO 101 A 1 HETATM 2 O O1 EDO . . . C 2 -7.017 -0.889 14.926 1 39.72 ? O1 EDO 101 A 1 HETATM 3 C C2 EDO . . . C 2 -6.65 -2.058 13.011 1 42.75 ? C2 EDO 101 A 1 HETATM 4 O O2 EDO . . . C 2 -6.665 -1.598 11.679 1 48.35 ? O2 EDO 101 A 1 HETATM 5 H H11 EDO . . . C 2 -5.099 -1.099 14.154 1 46.48 ? H11 EDO 101 A 1 HETATM 6 H H12 EDO . . . C 2 -6.167 0.023 13.264 1 46.48 ? H12 EDO 101 A 1 HETATM 7 H HO1 EDO . . . C 2 -6.768 -0.175 15.528 1 47.66 ? HO1 EDO 101 A 1 HETATM 8 H H21 EDO . . . C 2 -5.999 -2.929 13.109 1 51.3 ? H21 EDO 101 A 1 HETATM 9 H H22 EDO . . . C 2 -7.657 -2.328 13.335 1 51.3 ? H22 EDO 101 A 1 HETATM 10 H HO2 EDO . . . C 2 -6.997 -2.298 11.1 1 58.01 ? HO2 EDO 101 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #