data_4ZCM # _model_server_result.job_id d7EfkBlQW5y0U0yEhHiOkw _model_server_result.datetime_utc '2024-12-06 18:10:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zcm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 4ZCM # _exptl.entry_id 4ZCM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 161.116 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT HEXAMMINE(III)' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.04 _cell.angle_gamma 90 _cell.entry_id 4ZCM _cell.length_a 56.821 _cell.length_b 160.125 _cell.length_c 89.718 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZCM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1 B,G,H,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'Co H18 N6 3' _chem_comp.formula_weight 161.116 _chem_comp.id NCO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT HEXAMMINE(III)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CO N1 NCO sing 290 n n CO N2 NCO sing 291 n n CO N3 NCO sing 292 n n CO N4 NCO sing 293 n n CO N5 NCO sing 294 n n CO N6 NCO sing 295 n n N1 HN11 NCO sing 296 n n N1 HN12 NCO sing 297 n n N1 HN13 NCO sing 298 n n N2 HN21 NCO sing 299 n n N2 HN22 NCO sing 300 n n N2 HN23 NCO sing 301 n n N3 HN31 NCO sing 302 n n N3 HN32 NCO sing 303 n n N3 HN33 NCO sing 304 n n N4 HN41 NCO sing 305 n n N4 HN42 NCO sing 306 n n N4 HN43 NCO sing 307 n n N5 HN51 NCO sing 308 n n N5 HN52 NCO sing 309 n n N5 HN53 NCO sing 310 n n N6 HN61 NCO sing 311 n n N6 HN62 NCO sing 312 n n N6 HN63 NCO sing 313 n n # _atom_sites.entry_id 4ZCM _atom_sites.fract_transf_matrix[1][1] 0.017599 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002487 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006245 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011257 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NCO A 1 1001 1001 NCO NCO . D 2 NCO A 1 1002 1002 NCO NCO . E 3 G4P A 1 1003 1101 G4P G4P . F 4 MG A 1 1004 1102 MG MG . G 2 NCO B 1 1001 1001 NCO NCO . H 2 NCO B 1 1002 1002 NCO NCO . I 3 G4P B 1 1003 1101 G4P G4P . J 4 MG B 1 1004 1102 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CO CO NCO . . . C 2 0.235 14.953 60.527 1 114.3 ? CO NCO 1001 A 1 HETATM 2 N N1 NCO . . . C 2 0.267 15.469 58.617 1 133.56 ? N1 NCO 1001 A 1 HETATM 3 N N2 NCO . . . C 2 0.202 14.436 62.438 1 133.06 ? N2 NCO 1001 A 1 HETATM 4 N N3 NCO . . . C 2 1.146 16.646 60.998 1 127.11 ? N3 NCO 1001 A 1 HETATM 5 N N4 NCO . . . C 2 1.993 14.068 60.316 1 120.23 ? N4 NCO 1001 A 1 HETATM 6 N N5 NCO . . . C 2 -0.677 13.26 60.054 1 130 ? N5 NCO 1001 A 1 HETATM 7 N N6 NCO . . . C 2 -1.524 15.838 60.736 1 121.79 ? N6 NCO 1001 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #