data_4ZCR # _model_server_result.job_id EPz8j42iRTr8j5PAjN1Jmw _model_server_result.datetime_utc '2024-11-25 10:56:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zcr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 4ZCR # _exptl.entry_id 4ZCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 184.151 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZCR _cell.length_a 50.62 _cell.length_b 69.57 _cell.length_c 117.86 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_645 -x+1,-y-1,z -1 0 0 0 -1 0 0 0 1 50.62 -69.57 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H15 N O4 P 1' _chem_comp.formula_weight 184.151 _chem_comp.id PC _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1 PC doub 237 n n P1 O3 PC sing 238 n n P1 O4 PC sing 239 n n P1 O2 PC sing 240 n n O3 HO3 PC sing 241 n n O4 HO4 PC sing 242 n n O2 C1 PC sing 243 n n C1 C2 PC sing 244 n n C1 H11 PC sing 245 n n C1 H12 PC sing 246 n n C2 N1 PC sing 247 n n C2 H21 PC sing 248 n n C2 H22 PC sing 249 n n N1 C3 PC sing 250 n n N1 C4 PC sing 251 n n N1 C5 PC sing 252 n n C3 H31 PC sing 253 n n C3 H32 PC sing 254 n n C3 H33 PC sing 255 n n C4 H41 PC sing 256 n n C4 H42 PC sing 257 n n C4 H43 PC sing 258 n n C5 H51 PC sing 259 n n C5 H52 PC sing 260 n n C5 H53 PC sing 261 n n # _atom_sites.entry_id 4ZCR _atom_sites.fract_transf_matrix[1][1] 0.019755 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014374 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008485 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PC A 1 801 1 PC PC . C 3 HOH A 1 901 50 HOH HOH . C 3 HOH A 2 902 56 HOH HOH . C 3 HOH A 3 903 22 HOH HOH . C 3 HOH A 4 904 87 HOH HOH . C 3 HOH A 5 905 81 HOH HOH . C 3 HOH A 6 906 44 HOH HOH . C 3 HOH A 7 907 27 HOH HOH . C 3 HOH A 8 908 7 HOH HOH . C 3 HOH A 9 909 45 HOH HOH . C 3 HOH A 10 910 75 HOH HOH . C 3 HOH A 11 911 6 HOH HOH . C 3 HOH A 12 912 25 HOH HOH . C 3 HOH A 13 913 34 HOH HOH . C 3 HOH A 14 914 70 HOH HOH . C 3 HOH A 15 915 5 HOH HOH . C 3 HOH A 16 916 2 HOH HOH . C 3 HOH A 17 917 13 HOH HOH . C 3 HOH A 18 918 10 HOH HOH . C 3 HOH A 19 919 60 HOH HOH . C 3 HOH A 20 920 8 HOH HOH . C 3 HOH A 21 921 72 HOH HOH . C 3 HOH A 22 922 32 HOH HOH . C 3 HOH A 23 923 47 HOH HOH . C 3 HOH A 24 924 29 HOH HOH . C 3 HOH A 25 925 1 HOH HOH . C 3 HOH A 26 926 11 HOH HOH . C 3 HOH A 27 927 30 HOH HOH . C 3 HOH A 28 928 4 HOH HOH . C 3 HOH A 29 929 77 HOH HOH . C 3 HOH A 30 930 3 HOH HOH . C 3 HOH A 31 931 57 HOH HOH . C 3 HOH A 32 932 12 HOH HOH . C 3 HOH A 33 933 52 HOH HOH . C 3 HOH A 34 934 62 HOH HOH . C 3 HOH A 35 935 83 HOH HOH . C 3 HOH A 36 936 20 HOH HOH . C 3 HOH A 37 937 64 HOH HOH . C 3 HOH A 38 938 73 HOH HOH . C 3 HOH A 39 939 18 HOH HOH . C 3 HOH A 40 940 33 HOH HOH . C 3 HOH A 41 941 38 HOH HOH . C 3 HOH A 42 942 61 HOH HOH . C 3 HOH A 43 943 74 HOH HOH . C 3 HOH A 44 944 49 HOH HOH . C 3 HOH A 45 945 91 HOH HOH . C 3 HOH A 46 946 42 HOH HOH . C 3 HOH A 47 947 53 HOH HOH . C 3 HOH A 48 948 26 HOH HOH . C 3 HOH A 49 949 21 HOH HOH . C 3 HOH A 50 950 43 HOH HOH . C 3 HOH A 51 951 66 HOH HOH . C 3 HOH A 52 952 16 HOH HOH . C 3 HOH A 53 953 24 HOH HOH . C 3 HOH A 54 954 17 HOH HOH . C 3 HOH A 55 955 71 HOH HOH . C 3 HOH A 56 956 84 HOH HOH . C 3 HOH A 57 957 37 HOH HOH . C 3 HOH A 58 958 41 HOH HOH . C 3 HOH A 59 959 19 HOH HOH . C 3 HOH A 60 960 55 HOH HOH . C 3 HOH A 61 961 31 HOH HOH . C 3 HOH A 62 962 48 HOH HOH . C 3 HOH A 63 963 15 HOH HOH . C 3 HOH A 64 964 82 HOH HOH . C 3 HOH A 65 965 59 HOH HOH . C 3 HOH A 66 966 23 HOH HOH . C 3 HOH A 67 967 40 HOH HOH . C 3 HOH A 68 968 14 HOH HOH . C 3 HOH A 69 969 76 HOH HOH . C 3 HOH A 70 970 58 HOH HOH . C 3 HOH A 71 971 54 HOH HOH . C 3 HOH A 72 972 51 HOH HOH . C 3 HOH A 73 973 9 HOH HOH . C 3 HOH A 74 974 80 HOH HOH . C 3 HOH A 75 975 63 HOH HOH . C 3 HOH A 76 976 65 HOH HOH . C 3 HOH A 77 977 79 HOH HOH . C 3 HOH A 78 978 28 HOH HOH . C 3 HOH A 79 979 85 HOH HOH . C 3 HOH A 80 980 88 HOH HOH . C 3 HOH A 81 981 36 HOH HOH . C 3 HOH A 82 982 35 HOH HOH . C 3 HOH A 83 983 68 HOH HOH . C 3 HOH A 84 984 69 HOH HOH . C 3 HOH A 85 985 90 HOH HOH . C 3 HOH A 86 986 46 HOH HOH . C 3 HOH A 87 987 39 HOH HOH . C 3 HOH A 88 988 67 HOH HOH . C 3 HOH A 89 989 89 HOH HOH . C 3 HOH A 90 990 78 HOH HOH . C 3 HOH A 91 991 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 PC . . . B 2 17.918 -49.572 251.982 0.6 67.84 ? P1 PC 801 A 1 HETATM 2 O O1 PC . . . B 2 16.88 -49.871 250.765 0.6 75.49 ? O1 PC 801 A 1 HETATM 3 O O3 PC . . . B 2 17.065 -48.765 253.131 0.6 59.11 ? O3 PC 801 A 1 HETATM 4 O O4 PC . . . B 2 19.127 -48.824 251.532 0.6 49.42 ? O4 PC 801 A 1 HETATM 5 O O2 PC . . . B 2 18.261 -51.024 252.584 0.6 64.58 ? O2 PC 801 A 1 HETATM 6 C C1 PC . . . B 2 18.638 -52.091 251.749 0.6 63.07 ? C1 PC 801 A 1 HETATM 7 C C2 PC . . . B 2 19.684 -52.843 252.533 0.6 60.67 ? C2 PC 801 A 1 HETATM 8 N N1 PC . . . B 2 19.131 -53.951 253.385 0.6 61.5 ? N1 PC 801 A 1 HETATM 9 C C3 PC . . . B 2 20.253 -54.366 254.285 0.6 56.75 ? C3 PC 801 A 1 HETATM 10 C C4 PC . . . B 2 18.695 -55.112 252.548 0.6 63.29 ? C4 PC 801 A 1 HETATM 11 C C5 PC . . . B 2 17.959 -53.53 254.211 0.6 64.12 ? C5 PC 801 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #