data_4ZDQ # _model_server_result.job_id y9zSeDZSO_oxesRZbeRE2Q _model_server_result.datetime_utc '2025-02-05 06:52:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zdq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":307}' # _entry.id 4ZDQ # _exptl.entry_id 4ZDQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.94 _cell.angle_gamma 90 _cell.entry_id 4ZDQ _cell.length_a 45.9 _cell.length_b 138.95 _cell.length_c 76.92 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZDQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 PISA dimeric 2 software_defined_assembly 5 PISA dimeric 2 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,J,K,U 1 1 B,V 2 1 C,L,M,N,O,W 3 1 D,P,Q,R,S,T,X 4 1 A,B,E,F,G,H,I,J,K,U,V 5 1 C,D,L,M,N,O,P,Q,R,S,T,W,X 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 R N N ? 4 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E O2A CTP . A CTP 301 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc2 E O2B CTP . A CTP 301 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc3 E O3G CTP . A CTP 301 1_555 F MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc4 F MG MG . A MG 302 1_555 U O HOH . A HOH 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc5 F MG MG . A MG 302 1_555 U O HOH . A HOH 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc6 P O2A CTP . D CTP 301 1_555 Q MG MG . D MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc7 P O2B CTP . D CTP 301 1_555 Q MG MG . D MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 4ZDQ _atom_sites.fract_transf_matrix[1][1] 0.021786 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004607 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007197 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CTP A 1 301 300 CTP CTP . F 3 MG A 1 302 1 MG MG . G 4 ACT A 1 303 1 ACT ACT . H 4 ACT A 1 304 2 ACT ACT . I 4 ACT A 1 305 10 ACT ACT . J 4 ACT A 1 306 11 ACT ACT . K 4 ACT A 1 307 13 ACT ACT . L 4 ACT C 1 301 3 ACT ACT . M 4 ACT C 1 302 6 ACT ACT . N 4 ACT C 1 303 9 ACT ACT . O 5 CAD C 1 304 1 CAD CAD . P 2 CTP D 1 301 300 CTP CTP . Q 3 MG D 1 302 2 MG MG . R 4 ACT D 1 303 4 ACT ACT . S 4 ACT D 1 304 8 ACT ACT . T 6 GOL D 1 305 1 GOL GOL . U 7 HOH A 1 401 166 HOH HOH . U 7 HOH A 2 402 30 HOH HOH . U 7 HOH A 3 403 23 HOH HOH . U 7 HOH A 4 404 4 HOH HOH . U 7 HOH A 5 405 194 HOH HOH . U 7 HOH A 6 406 46 HOH HOH . U 7 HOH A 7 407 7 HOH HOH . U 7 HOH A 8 408 10 HOH HOH . U 7 HOH A 9 409 38 HOH HOH . U 7 HOH A 10 410 20 HOH HOH . U 7 HOH A 11 411 29 HOH HOH . U 7 HOH A 12 412 22 HOH HOH . U 7 HOH A 13 413 3 HOH HOH . U 7 HOH A 14 414 66 HOH HOH . U 7 HOH A 15 415 44 HOH HOH . U 7 HOH A 16 416 27 HOH HOH . U 7 HOH A 17 417 5 HOH HOH . U 7 HOH A 18 418 21 HOH HOH . U 7 HOH A 19 419 17 HOH HOH . U 7 HOH A 20 420 73 HOH HOH . U 7 HOH A 21 421 39 HOH HOH . U 7 HOH A 22 422 2 HOH HOH . U 7 HOH A 23 423 11 HOH HOH . U 7 HOH A 24 424 8 HOH HOH . U 7 HOH A 25 425 24 HOH HOH . U 7 HOH A 26 426 15 HOH HOH . U 7 HOH A 27 427 79 HOH HOH . U 7 HOH A 28 428 26 HOH HOH . U 7 HOH A 29 429 14 HOH HOH . U 7 HOH A 30 430 34 HOH HOH . U 7 HOH A 31 431 9 HOH HOH . U 7 HOH A 32 432 198 HOH HOH . U 7 HOH A 33 433 35 HOH HOH . U 7 HOH A 34 434 6 HOH HOH . U 7 HOH A 35 435 197 HOH HOH . U 7 HOH A 36 436 13 HOH HOH . U 7 HOH A 37 437 182 HOH HOH . U 7 HOH A 38 438 16 HOH HOH . U 7 HOH A 39 439 18 HOH HOH . U 7 HOH A 40 440 25 HOH HOH . U 7 HOH A 41 441 31 HOH HOH . U 7 HOH A 42 442 37 HOH HOH . U 7 HOH A 43 443 49 HOH HOH . U 7 HOH A 44 444 196 HOH HOH . U 7 HOH A 45 445 181 HOH HOH . U 7 HOH A 46 446 12 HOH HOH . U 7 HOH A 47 447 86 HOH HOH . U 7 HOH A 48 448 165 HOH HOH . U 7 HOH A 49 449 199 HOH HOH . U 7 HOH A 50 450 216 HOH HOH . U 7 HOH A 51 451 40 HOH HOH . U 7 HOH A 52 452 195 HOH HOH . U 7 HOH A 53 453 28 HOH HOH . U 7 HOH A 54 454 201 HOH HOH . U 7 HOH A 55 455 163 HOH HOH . U 7 HOH A 56 456 19 HOH HOH . U 7 HOH A 57 457 212 HOH HOH . U 7 HOH A 58 458 1 HOH HOH . U 7 HOH A 59 459 36 HOH HOH . U 7 HOH A 60 460 173 HOH HOH . V 7 HOH B 1 301 90 HOH HOH . V 7 HOH B 2 302 76 HOH HOH . V 7 HOH B 3 303 91 HOH HOH . V 7 HOH B 4 304 84 HOH HOH . V 7 HOH B 5 305 54 HOH HOH . V 7 HOH B 6 306 59 HOH HOH . V 7 HOH B 7 307 77 HOH HOH . V 7 HOH B 8 308 64 HOH HOH . V 7 HOH B 9 309 53 HOH HOH . V 7 HOH B 10 310 164 HOH HOH . V 7 HOH B 11 311 58 HOH HOH . V 7 HOH B 12 312 52 HOH HOH . V 7 HOH B 13 313 51 HOH HOH . V 7 HOH B 14 314 62 HOH HOH . V 7 HOH B 15 315 65 HOH HOH . V 7 HOH B 16 316 82 HOH HOH . V 7 HOH B 17 317 72 HOH HOH . V 7 HOH B 18 318 74 HOH HOH . V 7 HOH B 19 319 71 HOH HOH . V 7 HOH B 20 320 174 HOH HOH . V 7 HOH B 21 321 57 HOH HOH . V 7 HOH B 22 322 60 HOH HOH . V 7 HOH B 23 323 68 HOH HOH . V 7 HOH B 24 324 167 HOH HOH . V 7 HOH B 25 325 47 HOH HOH . V 7 HOH B 26 326 50 HOH HOH . V 7 HOH B 27 327 81 HOH HOH . V 7 HOH B 28 328 78 HOH HOH . V 7 HOH B 29 329 56 HOH HOH . V 7 HOH B 30 330 55 HOH HOH . V 7 HOH B 31 331 63 HOH HOH . V 7 HOH B 32 332 67 HOH HOH . V 7 HOH B 33 333 202 HOH HOH . V 7 HOH B 34 334 92 HOH HOH . V 7 HOH B 35 335 184 HOH HOH . V 7 HOH B 36 336 214 HOH HOH . V 7 HOH B 37 337 162 HOH HOH . V 7 HOH B 38 338 80 HOH HOH . V 7 HOH B 39 339 175 HOH HOH . V 7 HOH B 40 340 213 HOH HOH . V 7 HOH B 41 341 83 HOH HOH . V 7 HOH B 42 342 69 HOH HOH . V 7 HOH B 43 343 70 HOH HOH . V 7 HOH B 44 344 85 HOH HOH . W 7 HOH C 1 401 113 HOH HOH . W 7 HOH C 2 402 102 HOH HOH . W 7 HOH C 3 403 98 HOH HOH . W 7 HOH C 4 404 110 HOH HOH . W 7 HOH C 5 405 108 HOH HOH . W 7 HOH C 6 406 132 HOH HOH . W 7 HOH C 7 407 99 HOH HOH . W 7 HOH C 8 408 101 HOH HOH . W 7 HOH C 9 409 93 HOH HOH . W 7 HOH C 10 410 117 HOH HOH . W 7 HOH C 11 411 111 HOH HOH . W 7 HOH C 12 412 189 HOH HOH . W 7 HOH C 13 413 106 HOH HOH . W 7 HOH C 14 414 118 HOH HOH . W 7 HOH C 15 415 97 HOH HOH . W 7 HOH C 16 416 204 HOH HOH . W 7 HOH C 17 417 103 HOH HOH . W 7 HOH C 18 418 94 HOH HOH . W 7 HOH C 19 419 203 HOH HOH . W 7 HOH C 20 420 119 HOH HOH . W 7 HOH C 21 421 125 HOH HOH . W 7 HOH C 22 422 123 HOH HOH . W 7 HOH C 23 423 187 HOH HOH . W 7 HOH C 24 424 112 HOH HOH . W 7 HOH C 25 425 121 HOH HOH . W 7 HOH C 26 426 95 HOH HOH . W 7 HOH C 27 427 114 HOH HOH . W 7 HOH C 28 428 115 HOH HOH . W 7 HOH C 29 429 104 HOH HOH . W 7 HOH C 30 430 109 HOH HOH . W 7 HOH C 31 431 96 HOH HOH . W 7 HOH C 32 432 193 HOH HOH . W 7 HOH C 33 433 116 HOH HOH . W 7 HOH C 34 434 105 HOH HOH . W 7 HOH C 35 435 100 HOH HOH . W 7 HOH C 36 436 186 HOH HOH . W 7 HOH C 37 437 192 HOH HOH . W 7 HOH C 38 438 126 HOH HOH . W 7 HOH C 39 439 128 HOH HOH . W 7 HOH C 40 440 172 HOH HOH . W 7 HOH C 41 441 107 HOH HOH . W 7 HOH C 42 442 188 HOH HOH . X 7 HOH D 1 401 159 HOH HOH . X 7 HOH D 2 402 133 HOH HOH . X 7 HOH D 3 403 148 HOH HOH . X 7 HOH D 4 404 160 HOH HOH . X 7 HOH D 5 405 141 HOH HOH . X 7 HOH D 6 406 209 HOH HOH . X 7 HOH D 7 407 210 HOH HOH . X 7 HOH D 8 408 149 HOH HOH . X 7 HOH D 9 409 150 HOH HOH . X 7 HOH D 10 410 161 HOH HOH . X 7 HOH D 11 411 134 HOH HOH . X 7 HOH D 12 412 140 HOH HOH . X 7 HOH D 13 413 170 HOH HOH . X 7 HOH D 14 414 131 HOH HOH . X 7 HOH D 15 415 139 HOH HOH . X 7 HOH D 16 416 208 HOH HOH . X 7 HOH D 17 417 142 HOH HOH . X 7 HOH D 18 418 138 HOH HOH . X 7 HOH D 19 419 151 HOH HOH . X 7 HOH D 20 420 158 HOH HOH . X 7 HOH D 21 421 135 HOH HOH . X 7 HOH D 22 422 205 HOH HOH . X 7 HOH D 23 423 129 HOH HOH . X 7 HOH D 24 424 136 HOH HOH . X 7 HOH D 25 425 185 HOH HOH . X 7 HOH D 26 426 145 HOH HOH . X 7 HOH D 27 427 207 HOH HOH . X 7 HOH D 28 428 144 HOH HOH . X 7 HOH D 29 429 152 HOH HOH . X 7 HOH D 30 430 157 HOH HOH . X 7 HOH D 31 431 147 HOH HOH . X 7 HOH D 32 432 156 HOH HOH . X 7 HOH D 33 433 130 HOH HOH . X 7 HOH D 34 434 206 HOH HOH . X 7 HOH D 35 435 168 HOH HOH . X 7 HOH D 36 436 169 HOH HOH . X 7 HOH D 37 437 211 HOH HOH . X 7 HOH D 38 438 143 HOH HOH . X 7 HOH D 39 439 215 HOH HOH . X 7 HOH D 40 440 137 HOH HOH . X 7 HOH D 41 441 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . K 4 49.25 67.659 33.336 1 53.92 ? C ACT 307 A 1 HETATM 2 O O ACT . . . K 4 48.374 66.865 33.742 1 56.39 ? O ACT 307 A 1 HETATM 3 O OXT ACT . . . K 4 50.228 67.832 34.095 1 57.52 ? OXT ACT 307 A 1 HETATM 4 C CH3 ACT . . . K 4 49.133 68.363 32.017 1 49.66 ? CH3 ACT 307 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #