data_4ZEC # _model_server_result.job_id BqncDcF4rHsNkRFENZm-cg _model_server_result.datetime_utc '2024-11-01 22:38:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zec # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 4ZEC # _exptl.entry_id 4ZEC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZEC _cell.length_a 77.18 _cell.length_b 114.17 _cell.length_c 111.67 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZEC _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 220 n n C1 C2 GOL sing 221 n n C1 H11 GOL sing 222 n n C1 H12 GOL sing 223 n n O1 HO1 GOL sing 224 n n C2 O2 GOL sing 225 n n C2 C3 GOL sing 226 n n C2 H2 GOL sing 227 n n O2 HO2 GOL sing 228 n n C3 O3 GOL sing 229 n n C3 H31 GOL sing 230 n n C3 H32 GOL sing 231 n n O3 HO3 GOL sing 232 n n # _atom_sites.entry_id 4ZEC _atom_sites.fract_transf_matrix[1][1] 0.012957 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008759 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008955 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C84 A 1 601 1 C84 C84 . C 3 PEG A 1 602 1 PEG PEG . D 4 GOL A 1 603 1 GOL GOL . E 5 EDO A 1 604 1 EDO EDO . F 5 EDO A 1 605 2 EDO EDO . G 5 EDO A 1 606 3 EDO EDO . H 6 HOH A 1 701 23 HOH HOH . H 6 HOH A 2 702 159 HOH HOH . H 6 HOH A 3 703 214 HOH HOH . H 6 HOH A 4 704 58 HOH HOH . H 6 HOH A 5 705 77 HOH HOH . H 6 HOH A 6 706 239 HOH HOH . H 6 HOH A 7 707 96 HOH HOH . H 6 HOH A 8 708 50 HOH HOH . H 6 HOH A 9 709 97 HOH HOH . H 6 HOH A 10 710 141 HOH HOH . H 6 HOH A 11 711 156 HOH HOH . H 6 HOH A 12 712 165 HOH HOH . H 6 HOH A 13 713 60 HOH HOH . H 6 HOH A 14 714 90 HOH HOH . H 6 HOH A 15 715 66 HOH HOH . H 6 HOH A 16 716 161 HOH HOH . H 6 HOH A 17 717 136 HOH HOH . H 6 HOH A 18 718 157 HOH HOH . H 6 HOH A 19 719 52 HOH HOH . H 6 HOH A 20 720 62 HOH HOH . H 6 HOH A 21 721 124 HOH HOH . H 6 HOH A 22 722 44 HOH HOH . H 6 HOH A 23 723 138 HOH HOH . H 6 HOH A 24 724 94 HOH HOH . H 6 HOH A 25 725 13 HOH HOH . H 6 HOH A 26 726 55 HOH HOH . H 6 HOH A 27 727 10 HOH HOH . H 6 HOH A 28 728 11 HOH HOH . H 6 HOH A 29 729 21 HOH HOH . H 6 HOH A 30 730 29 HOH HOH . H 6 HOH A 31 731 32 HOH HOH . H 6 HOH A 32 732 154 HOH HOH . H 6 HOH A 33 733 36 HOH HOH . H 6 HOH A 34 734 34 HOH HOH . H 6 HOH A 35 735 134 HOH HOH . H 6 HOH A 36 736 149 HOH HOH . H 6 HOH A 37 737 177 HOH HOH . H 6 HOH A 38 738 174 HOH HOH . H 6 HOH A 39 739 75 HOH HOH . H 6 HOH A 40 740 175 HOH HOH . H 6 HOH A 41 741 49 HOH HOH . H 6 HOH A 42 742 6 HOH HOH . H 6 HOH A 43 743 39 HOH HOH . H 6 HOH A 44 744 135 HOH HOH . H 6 HOH A 45 745 82 HOH HOH . H 6 HOH A 46 746 54 HOH HOH . H 6 HOH A 47 747 172 HOH HOH . H 6 HOH A 48 748 140 HOH HOH . H 6 HOH A 49 749 170 HOH HOH . H 6 HOH A 50 750 53 HOH HOH . H 6 HOH A 51 751 46 HOH HOH . H 6 HOH A 52 752 70 HOH HOH . H 6 HOH A 53 753 14 HOH HOH . H 6 HOH A 54 754 144 HOH HOH . H 6 HOH A 55 755 95 HOH HOH . H 6 HOH A 56 756 93 HOH HOH . H 6 HOH A 57 757 17 HOH HOH . H 6 HOH A 58 758 38 HOH HOH . H 6 HOH A 59 759 89 HOH HOH . H 6 HOH A 60 760 83 HOH HOH . H 6 HOH A 61 761 115 HOH HOH . H 6 HOH A 62 762 30 HOH HOH . H 6 HOH A 63 763 33 HOH HOH . H 6 HOH A 64 764 67 HOH HOH . H 6 HOH A 65 765 147 HOH HOH . H 6 HOH A 66 766 252 HOH HOH . H 6 HOH A 67 767 92 HOH HOH . H 6 HOH A 68 768 41 HOH HOH . H 6 HOH A 69 769 45 HOH HOH . H 6 HOH A 70 770 28 HOH HOH . H 6 HOH A 71 771 155 HOH HOH . H 6 HOH A 72 772 19 HOH HOH . H 6 HOH A 73 773 4 HOH HOH . H 6 HOH A 74 774 162 HOH HOH . H 6 HOH A 75 775 249 HOH HOH . H 6 HOH A 76 776 71 HOH HOH . H 6 HOH A 77 777 5 HOH HOH . H 6 HOH A 78 778 57 HOH HOH . H 6 HOH A 79 779 9 HOH HOH . H 6 HOH A 80 780 87 HOH HOH . H 6 HOH A 81 781 178 HOH HOH . H 6 HOH A 82 782 139 HOH HOH . H 6 HOH A 83 783 221 HOH HOH . H 6 HOH A 84 784 7 HOH HOH . H 6 HOH A 85 785 37 HOH HOH . H 6 HOH A 86 786 164 HOH HOH . H 6 HOH A 87 787 73 HOH HOH . H 6 HOH A 88 788 22 HOH HOH . H 6 HOH A 89 789 65 HOH HOH . H 6 HOH A 90 790 27 HOH HOH . H 6 HOH A 91 791 78 HOH HOH . H 6 HOH A 92 792 151 HOH HOH . H 6 HOH A 93 793 85 HOH HOH . H 6 HOH A 94 794 8 HOH HOH . H 6 HOH A 95 795 224 HOH HOH . H 6 HOH A 96 796 176 HOH HOH . H 6 HOH A 97 797 35 HOH HOH . H 6 HOH A 98 798 260 HOH HOH . H 6 HOH A 99 799 31 HOH HOH . H 6 HOH A 100 800 171 HOH HOH . H 6 HOH A 101 801 3 HOH HOH . H 6 HOH A 102 802 68 HOH HOH . H 6 HOH A 103 803 20 HOH HOH . H 6 HOH A 104 804 18 HOH HOH . H 6 HOH A 105 805 114 HOH HOH . H 6 HOH A 106 806 1 HOH HOH . H 6 HOH A 107 807 43 HOH HOH . H 6 HOH A 108 808 180 HOH HOH . H 6 HOH A 109 809 48 HOH HOH . H 6 HOH A 110 810 103 HOH HOH . H 6 HOH A 111 811 142 HOH HOH . H 6 HOH A 112 812 184 HOH HOH . H 6 HOH A 113 813 143 HOH HOH . H 6 HOH A 114 814 209 HOH HOH . H 6 HOH A 115 815 42 HOH HOH . H 6 HOH A 116 816 104 HOH HOH . H 6 HOH A 117 817 72 HOH HOH . H 6 HOH A 118 818 91 HOH HOH . H 6 HOH A 119 819 153 HOH HOH . H 6 HOH A 120 820 12 HOH HOH . H 6 HOH A 121 821 99 HOH HOH . H 6 HOH A 122 822 152 HOH HOH . H 6 HOH A 123 823 61 HOH HOH . H 6 HOH A 124 824 169 HOH HOH . H 6 HOH A 125 825 158 HOH HOH . H 6 HOH A 126 826 63 HOH HOH . H 6 HOH A 127 827 145 HOH HOH . H 6 HOH A 128 828 101 HOH HOH . H 6 HOH A 129 829 64 HOH HOH . H 6 HOH A 130 830 84 HOH HOH . H 6 HOH A 131 831 2 HOH HOH . H 6 HOH A 132 832 150 HOH HOH . H 6 HOH A 133 833 59 HOH HOH . H 6 HOH A 134 834 26 HOH HOH . H 6 HOH A 135 835 110 HOH HOH . H 6 HOH A 136 836 244 HOH HOH . H 6 HOH A 137 837 88 HOH HOH . H 6 HOH A 138 838 222 HOH HOH . H 6 HOH A 139 839 74 HOH HOH . H 6 HOH A 140 840 117 HOH HOH . H 6 HOH A 141 841 258 HOH HOH . H 6 HOH A 142 842 257 HOH HOH . H 6 HOH A 143 843 248 HOH HOH . H 6 HOH A 144 844 179 HOH HOH . H 6 HOH A 145 845 120 HOH HOH . H 6 HOH A 146 846 133 HOH HOH . H 6 HOH A 147 847 76 HOH HOH . H 6 HOH A 148 848 69 HOH HOH . H 6 HOH A 149 849 105 HOH HOH . H 6 HOH A 150 850 181 HOH HOH . H 6 HOH A 151 851 40 HOH HOH . H 6 HOH A 152 852 188 HOH HOH . H 6 HOH A 153 853 16 HOH HOH . H 6 HOH A 154 854 24 HOH HOH . H 6 HOH A 155 855 183 HOH HOH . H 6 HOH A 156 856 25 HOH HOH . H 6 HOH A 157 857 47 HOH HOH . H 6 HOH A 158 858 228 HOH HOH . H 6 HOH A 159 859 119 HOH HOH . H 6 HOH A 160 860 235 HOH HOH . H 6 HOH A 161 861 191 HOH HOH . H 6 HOH A 162 862 79 HOH HOH . H 6 HOH A 163 863 163 HOH HOH . H 6 HOH A 164 864 116 HOH HOH . H 6 HOH A 165 865 205 HOH HOH . H 6 HOH A 166 866 236 HOH HOH . H 6 HOH A 167 867 250 HOH HOH . H 6 HOH A 168 868 226 HOH HOH . H 6 HOH A 169 869 81 HOH HOH . H 6 HOH A 170 870 242 HOH HOH . H 6 HOH A 171 871 2 HOH HOH . H 6 HOH A 172 872 195 HOH HOH . H 6 HOH A 173 873 197 HOH HOH . H 6 HOH A 174 874 86 HOH HOH . H 6 HOH A 175 875 243 HOH HOH . H 6 HOH A 176 876 259 HOH HOH . H 6 HOH A 177 877 80 HOH HOH . H 6 HOH A 178 878 148 HOH HOH . H 6 HOH A 179 879 256 HOH HOH . H 6 HOH A 180 880 255 HOH HOH . H 6 HOH A 181 881 227 HOH HOH . H 6 HOH A 182 882 185 HOH HOH . H 6 HOH A 183 883 232 HOH HOH . H 6 HOH A 184 884 230 HOH HOH . H 6 HOH A 185 885 98 HOH HOH . H 6 HOH A 186 886 240 HOH HOH . H 6 HOH A 187 887 246 HOH HOH . H 6 HOH A 188 888 126 HOH HOH . H 6 HOH A 189 889 229 HOH HOH . H 6 HOH A 190 890 231 HOH HOH . H 6 HOH A 191 891 112 HOH HOH . H 6 HOH A 192 892 127 HOH HOH . H 6 HOH A 193 893 186 HOH HOH . H 6 HOH A 194 894 225 HOH HOH . H 6 HOH A 195 895 253 HOH HOH . H 6 HOH A 196 896 211 HOH HOH . H 6 HOH A 197 897 237 HOH HOH . H 6 HOH A 198 898 254 HOH HOH . H 6 HOH A 199 899 182 HOH HOH . H 6 HOH A 200 900 196 HOH HOH . H 6 HOH A 201 901 131 HOH HOH . H 6 HOH A 202 902 109 HOH HOH . H 6 HOH A 203 903 111 HOH HOH . H 6 HOH A 204 904 261 HOH HOH . H 6 HOH A 205 905 189 HOH HOH . H 6 HOH A 206 906 241 HOH HOH . H 6 HOH A 207 907 51 HOH HOH . H 6 HOH A 208 908 118 HOH HOH . H 6 HOH A 209 909 187 HOH HOH . H 6 HOH A 210 910 192 HOH HOH . H 6 HOH A 211 911 190 HOH HOH . H 6 HOH A 212 912 125 HOH HOH . H 6 HOH A 213 913 198 HOH HOH . H 6 HOH A 214 914 113 HOH HOH . H 6 HOH A 215 915 108 HOH HOH . H 6 HOH A 216 916 122 HOH HOH . H 6 HOH A 217 917 1 HOH HOH . H 6 HOH A 218 918 128 HOH HOH . H 6 HOH A 219 919 247 HOH HOH . H 6 HOH A 220 920 238 HOH HOH . H 6 HOH A 221 921 234 HOH HOH . H 6 HOH A 222 922 233 HOH HOH . H 6 HOH A 223 923 245 HOH HOH . H 6 HOH A 224 924 123 HOH HOH . H 6 HOH A 225 925 107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 -33.745 -56.184 21.764 1 56.68 ? C1 GOL 603 A 1 HETATM 2 O O1 GOL . . . D 4 -35.154 -56.033 21.606 1 56.52 ? O1 GOL 603 A 1 HETATM 3 C C2 GOL . . . D 4 -33.407 -56.737 23.13 1 56.46 ? C2 GOL 603 A 1 HETATM 4 O O2 GOL . . . D 4 -33.843 -58.098 23.203 1 56.61 ? O2 GOL 603 A 1 HETATM 5 C C3 GOL . . . D 4 -31.924 -56.644 23.415 1 56.23 ? C3 GOL 603 A 1 HETATM 6 O O3 GOL . . . D 4 -31.618 -56.99 24.767 1 55.97 ? O3 GOL 603 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #