data_4ZGM # _model_server_result.job_id 0wHEGLv67tx2pIbvdAzOWg _model_server_result.datetime_utc '2024-11-08 12:42:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zgm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 4ZGM # _exptl.entry_id 4ZGM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 394.543 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18-hexaoxahexacosan-1-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZGM _cell.length_a 95.61 _cell.length_b 35.79 _cell.length_c 42.68 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZGM _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 46 1_555 A SG CYS 48 A CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? disulf ? disulf2 A SG CYS 39 A CYS 62 1_555 A SG CYS 81 A CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 A SG CYS 62 A CYS 85 1_555 A SG CYS 103 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? # _chem_comp.formula 'C20 H42 O7' _chem_comp.formula_weight 394.543 _chem_comp.id 32M _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18-hexaoxahexacosan-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HEXAETHYLENE GLYCOL MONOOCTYL ETHER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAB CAD 32M sing 1 n n OAV CAL 32M sing 2 n n OAV CAJ 32M sing 3 n n CAD CAJ 32M sing 4 n n CAL CAN 32M sing 5 n n CAN OAX 32M sing 6 n n OAX CAP 32M sing 7 n n CAP CAR 32M sing 8 n n CAR OAZ 32M sing 9 n n OAZ CAT 32M sing 10 n n CAT CAU 32M sing 11 n n CAU OBA 32M sing 12 n n OBA CAS 32M sing 13 n n CAS CAQ 32M sing 14 n n OAY CAQ 32M sing 15 n n OAY CAO 32M sing 16 n n CAO CAM 32M sing 17 n n CAM OAW 32M sing 18 n n CAK OAW 32M sing 19 n n CAK CAI 32M sing 20 n n CAI CAH 32M sing 21 n n CAH CAG 32M sing 22 n n CAG CAF 32M sing 23 n n CAF CAE 32M sing 24 n n CAE CAC 32M sing 25 n n CAC CAA 32M sing 26 n n CAA H1 32M sing 27 n n CAA H2 32M sing 28 n n CAA H3 32M sing 29 n n CAC H4 32M sing 30 n n CAC H5 32M sing 31 n n CAE H6 32M sing 32 n n CAE H7 32M sing 33 n n CAF H8 32M sing 34 n n CAF H9 32M sing 35 n n CAG H10 32M sing 36 n n CAG H11 32M sing 37 n n CAH H12 32M sing 38 n n CAH H13 32M sing 39 n n CAI H14 32M sing 40 n n CAI H15 32M sing 41 n n CAK H16 32M sing 42 n n CAK H17 32M sing 43 n n CAM H18 32M sing 44 n n CAM H19 32M sing 45 n n CAO H20 32M sing 46 n n CAO H21 32M sing 47 n n CAQ H22 32M sing 48 n n CAQ H23 32M sing 49 n n CAS H24 32M sing 50 n n CAS H25 32M sing 51 n n CAU H26 32M sing 52 n n CAU H27 32M sing 53 n n CAT H28 32M sing 54 n n CAT H29 32M sing 55 n n CAR H30 32M sing 56 n n CAR H31 32M sing 57 n n CAP H32 32M sing 58 n n CAP H33 32M sing 59 n n CAN H34 32M sing 60 n n CAN H35 32M sing 61 n n CAL H36 32M sing 62 n n CAL H37 32M sing 63 n n CAJ H38 32M sing 64 n n CAJ H39 32M sing 65 n n CAD H40 32M sing 66 n n CAD H41 32M sing 67 n n OAB H42 32M sing 68 n n # _atom_sites.entry_id 4ZGM _atom_sites.fract_transf_matrix[1][1] 0.010459 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02343 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 32M A 1 201 1 32M DET . D 3 32M B 1 101 2 32M DET . E 4 HOH A 1 301 89 HOH HOH . E 4 HOH A 2 302 64 HOH HOH . E 4 HOH A 3 303 80 HOH HOH . E 4 HOH A 4 304 65 HOH HOH . E 4 HOH A 5 305 14 HOH HOH . E 4 HOH A 6 306 31 HOH HOH . E 4 HOH A 7 307 75 HOH HOH . E 4 HOH A 8 308 58 HOH HOH . E 4 HOH A 9 309 77 HOH HOH . E 4 HOH A 10 310 9 HOH HOH . E 4 HOH A 11 311 44 HOH HOH . E 4 HOH A 12 312 37 HOH HOH . E 4 HOH A 13 313 68 HOH HOH . E 4 HOH A 14 314 48 HOH HOH . E 4 HOH A 15 315 28 HOH HOH . E 4 HOH A 16 316 76 HOH HOH . E 4 HOH A 17 317 11 HOH HOH . E 4 HOH A 18 318 25 HOH HOH . E 4 HOH A 19 319 1 HOH HOH . E 4 HOH A 20 320 4 HOH HOH . E 4 HOH A 21 321 7 HOH HOH . E 4 HOH A 22 322 79 HOH HOH . E 4 HOH A 23 323 30 HOH HOH . E 4 HOH A 24 324 66 HOH HOH . E 4 HOH A 25 325 18 HOH HOH . E 4 HOH A 26 326 16 HOH HOH . E 4 HOH A 27 327 2 HOH HOH . E 4 HOH A 28 328 42 HOH HOH . E 4 HOH A 29 329 35 HOH HOH . E 4 HOH A 30 330 56 HOH HOH . E 4 HOH A 31 331 70 HOH HOH . E 4 HOH A 32 332 20 HOH HOH . E 4 HOH A 33 333 59 HOH HOH . E 4 HOH A 34 334 92 HOH HOH . E 4 HOH A 35 335 26 HOH HOH . E 4 HOH A 36 336 10 HOH HOH . E 4 HOH A 37 337 23 HOH HOH . E 4 HOH A 38 338 12 HOH HOH . E 4 HOH A 39 339 74 HOH HOH . E 4 HOH A 40 340 5 HOH HOH . E 4 HOH A 41 341 39 HOH HOH . E 4 HOH A 42 342 62 HOH HOH . E 4 HOH A 43 343 90 HOH HOH . E 4 HOH A 44 344 29 HOH HOH . E 4 HOH A 45 345 34 HOH HOH . E 4 HOH A 46 346 78 HOH HOH . E 4 HOH A 47 347 15 HOH HOH . E 4 HOH A 48 348 19 HOH HOH . E 4 HOH A 49 349 63 HOH HOH . E 4 HOH A 50 350 67 HOH HOH . E 4 HOH A 51 351 45 HOH HOH . E 4 HOH A 52 352 3 HOH HOH . E 4 HOH A 53 353 24 HOH HOH . E 4 HOH A 54 354 22 HOH HOH . E 4 HOH A 55 355 13 HOH HOH . E 4 HOH A 56 356 17 HOH HOH . E 4 HOH A 57 357 43 HOH HOH . E 4 HOH A 58 358 54 HOH HOH . E 4 HOH A 59 359 83 HOH HOH . E 4 HOH A 60 360 69 HOH HOH . E 4 HOH A 61 361 33 HOH HOH . E 4 HOH A 62 362 8 HOH HOH . E 4 HOH A 63 363 72 HOH HOH . E 4 HOH A 64 364 53 HOH HOH . E 4 HOH A 65 365 73 HOH HOH . E 4 HOH A 66 366 46 HOH HOH . E 4 HOH A 67 367 91 HOH HOH . E 4 HOH A 68 368 86 HOH HOH . E 4 HOH A 69 369 71 HOH HOH . E 4 HOH A 70 370 82 HOH HOH . E 4 HOH A 71 371 81 HOH HOH . E 4 HOH A 72 372 84 HOH HOH . E 4 HOH A 73 373 93 HOH HOH . E 4 HOH A 74 374 57 HOH HOH . E 4 HOH A 75 375 40 HOH HOH . F 4 HOH B 1 201 87 HOH HOH . F 4 HOH B 2 202 60 HOH HOH . F 4 HOH B 3 203 50 HOH HOH . F 4 HOH B 4 204 6 HOH HOH . F 4 HOH B 5 205 38 HOH HOH . F 4 HOH B 6 206 41 HOH HOH . F 4 HOH B 7 207 36 HOH HOH . F 4 HOH B 8 208 55 HOH HOH . F 4 HOH B 9 209 51 HOH HOH . F 4 HOH B 10 210 61 HOH HOH . F 4 HOH B 11 211 88 HOH HOH . F 4 HOH B 12 212 27 HOH HOH . F 4 HOH B 13 213 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 32M . . . D 3 19.06 52.441 19.709 1 43.36 ? CAA 32M 101 B 1 HETATM 2 C CAC 32M . . . D 3 19.15 52.48 21.222 1 49.09 ? CAC 32M 101 B 1 HETATM 3 C CAE 32M . . . D 3 17.776 52.416 21.888 1 65.02 ? CAE 32M 101 B 1 HETATM 4 C CAF 32M . . . D 3 17.817 51.612 23.198 1 77.57 ? CAF 32M 101 B 1 HETATM 5 C CAG 32M . . . D 3 16.748 51.955 24.244 1 55.28 ? CAG 32M 101 B 1 HETATM 6 C CAH 32M . . . D 3 15.412 52.336 23.615 1 54.13 ? CAH 32M 101 B 1 HETATM 7 C CAI 32M . . . D 3 15.213 53.85 23.587 1 57.83 ? CAI 32M 101 B 1 HETATM 8 C CAK 32M . . . D 3 14.53 54.344 22.309 1 61.37 ? CAK 32M 101 B 1 HETATM 9 O OAW 32M . . . D 3 13.318 55.045 22.613 1 62.7 ? OAW 32M 101 B 1 HETATM 10 C CAM 32M . . . D 3 12.99 55.999 21.593 1 55.27 ? CAM 32M 101 B 1 HETATM 11 C CAO 32M . . . D 3 11.571 56.495 21.81 1 49.77 ? CAO 32M 101 B 1 HETATM 12 O OAY 32M . . . D 3 10.788 55.384 22.253 1 50.98 ? OAY 32M 101 B 1 HETATM 13 C CAQ 32M . . . D 3 10.264 55.541 23.576 1 51.43 ? CAQ 32M 101 B 1 HETATM 14 C CAS 32M . . . D 3 10.11 54.173 24.235 1 36.36 ? CAS 32M 101 B 1 HETATM 15 O OBA 32M . . . D 3 8.91 54.1 25.013 1 59.69 ? OBA 32M 101 B 1 HETATM 16 C CAU 32M . . . D 3 8.693 55.14 25.979 1 54.02 ? CAU 32M 101 B 1 HETATM 17 C CAT 32M . . . D 3 7.449 55.949 25.577 1 52.42 ? CAT 32M 101 B 1 HETATM 18 O OAZ 32M . . . D 3 6.381 55.748 26.518 1 58.83 ? OAZ 32M 101 B 1 HETATM 19 C CAR 32M . . . D 3 5.74 54.473 26.39 1 45.48 ? CAR 32M 101 B 1 HETATM 20 C CAP 32M . . . D 3 5.188 53.954 27.718 1 37.86 ? CAP 32M 101 B 1 HETATM 21 O OAX 32M . . . D 3 5.93 54.471 28.825 1 56.5 ? OAX 32M 101 B 1 HETATM 22 C CAN 32M . . . D 3 5.282 55.525 29.544 1 56.28 ? CAN 32M 101 B 1 HETATM 23 C CAL 32M . . . D 3 6.149 56.773 29.518 1 55.34 ? CAL 32M 101 B 1 HETATM 24 O OAV 32M . . . D 3 5.318 57.916 29.69 1 46.61 ? OAV 32M 101 B 1 HETATM 25 C CAJ 32M . . . D 3 5.994 59.101 29.293 1 47.56 ? CAJ 32M 101 B 1 HETATM 26 C CAD 32M . . . D 3 5.844 59.275 27.793 1 48.95 ? CAD 32M 101 B 1 HETATM 27 O OAB 32M . . . D 3 5.493 60.639 27.536 1 61.44 ? OAB 32M 101 B 1 HETATM 28 H H1 32M . . . D 3 18.492 53.267 19.368 1 52.03 ? H1 32M 101 B 1 HETATM 29 H H2 32M . . . D 3 18.591 51.541 19.407 1 52.03 ? H2 32M 101 B 1 HETATM 30 H H3 32M . . . D 3 20.034 52.488 19.296 1 52.03 ? H3 32M 101 B 1 HETATM 31 H H4 32M . . . D 3 19.756 51.64 21.568 1 58.9 ? H4 32M 101 B 1 HETATM 32 H H5 32M . . . D 3 19.654 53.399 21.528 1 58.9 ? H5 32M 101 B 1 HETATM 33 H H6 32M . . . D 3 17.427 53.429 22.097 1 78.03 ? H6 32M 101 B 1 HETATM 34 H H7 32M . . . D 3 17.063 51.953 21.202 1 78.03 ? H7 32M 101 B 1 HETATM 35 H H8 32M . . . D 3 17.728 50.551 22.952 1 93.09 ? H8 32M 101 B 1 HETATM 36 H H9 32M . . . D 3 18.8 51.749 23.653 1 93.09 ? H9 32M 101 B 1 HETATM 37 H H10 32M . . . D 3 16.601 51.096 24.902 1 66.34 ? H10 32M 101 B 1 HETATM 38 H H11 32M . . . D 3 17.103 52.785 24.86 1 66.34 ? H11 32M 101 B 1 HETATM 39 H H12 32M . . . D 3 14.601 51.876 24.183 1 64.96 ? H12 32M 101 B 1 HETATM 40 H H13 32M . . . D 3 15.368 51.947 22.596 1 64.96 ? H13 32M 101 B 1 HETATM 41 H H14 32M . . . D 3 14.612 54.146 24.449 1 69.39 ? H14 32M 101 B 1 HETATM 42 H H15 32M . . . D 3 16.186 54.338 23.682 1 69.39 ? H15 32M 101 B 1 HETATM 43 H H16 32M . . . D 3 15.208 55.006 21.767 1 73.64 ? H16 32M 101 B 1 HETATM 44 H H17 32M . . . D 3 14.306 53.492 21.664 1 73.64 ? H17 32M 101 B 1 HETATM 45 H H18 32M . . . D 3 13.686 56.84 21.634 1 66.33 ? H18 32M 101 B 1 HETATM 46 H H19 32M . . . D 3 13.074 55.533 20.609 1 66.33 ? H19 32M 101 B 1 HETATM 47 H H20 32M . . . D 3 11.559 57.287 22.562 1 59.72 ? H20 32M 101 B 1 HETATM 48 H H21 32M . . . D 3 11.165 56.894 20.878 1 59.72 ? H21 32M 101 B 1 HETATM 49 H H22 32M . . . D 3 10.939 56.162 24.169 1 61.72 ? H22 32M 101 B 1 HETATM 50 H H23 32M . . . D 3 9.294 56.04 23.532 1 61.72 ? H23 32M 101 B 1 HETATM 51 H H24 32M . . . D 3 10.089 53.399 23.464 1 43.63 ? H24 32M 101 B 1 HETATM 52 H H25 32M . . . D 3 10.972 53.981 24.878 1 43.63 ? H25 32M 101 B 1 HETATM 53 H H26 32M . . . D 3 9.565 55.797 26.02 1 64.83 ? H26 32M 101 B 1 HETATM 54 H H27 32M . . . D 3 8.547 54.703 26.969 1 64.83 ? H27 32M 101 B 1 HETATM 55 H H28 32M . . . D 3 7.121 55.641 24.582 1 62.9 ? H28 32M 101 B 1 HETATM 56 H H29 32M . . . D 3 7.703 57.01 25.534 1 62.9 ? H29 32M 101 B 1 HETATM 57 H H30 32M . . . D 3 4.923 54.555 25.671 1 54.57 ? H30 32M 101 B 1 HETATM 58 H H31 32M . . . D 3 6.457 53.751 25.994 1 54.57 ? H31 32M 101 B 1 HETATM 59 H H32 32M . . . D 3 4.141 54.246 27.815 1 45.43 ? H32 32M 101 B 1 HETATM 60 H H33 32M . . . D 3 5.234 52.863 27.728 1 45.43 ? H33 32M 101 B 1 HETATM 61 H H34 32M . . . D 3 4.313 55.74 29.089 1 67.54 ? H34 32M 101 B 1 HETATM 62 H H35 32M . . . D 3 5.112 55.216 30.577 1 67.54 ? H35 32M 101 B 1 HETATM 63 H H36 32M . . . D 3 6.889 56.728 30.32 1 66.41 ? H36 32M 101 B 1 HETATM 64 H H37 32M . . . D 3 6.678 56.839 28.565 1 66.41 ? H37 32M 101 B 1 HETATM 65 H H38 32M . . . D 3 5.569 59.963 29.811 1 57.07 ? H38 32M 101 B 1 HETATM 66 H H39 32M . . . D 3 7.052 59.031 29.555 1 57.07 ? H39 32M 101 B 1 HETATM 67 H H40 32M . . . D 3 6.782 59.029 27.291 1 58.74 ? H40 32M 101 B 1 HETATM 68 H H41 32M . . . D 3 5.064 58.61 27.415 1 58.74 ? H41 32M 101 B 1 HETATM 69 H H42 32M . . . D 3 6.191 61.219 27.87 1 73.73 ? H42 32M 101 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 69 #