data_4ZGM # _model_server_result.job_id 2jB-nwuGxjikIuNBdh0hiw _model_server_result.datetime_utc '2024-11-08 12:53:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zgm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4ZGM # _exptl.entry_id 4ZGM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 394.543 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18-hexaoxahexacosan-1-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZGM _cell.length_a 95.61 _cell.length_b 35.79 _cell.length_c 42.68 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZGM _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 46 1_555 A SG CYS 48 A CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? disulf ? disulf2 A SG CYS 39 A CYS 62 1_555 A SG CYS 81 A CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 A SG CYS 62 A CYS 85 1_555 A SG CYS 103 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? # _chem_comp.formula 'C20 H42 O7' _chem_comp.formula_weight 394.543 _chem_comp.id 32M _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18-hexaoxahexacosan-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HEXAETHYLENE GLYCOL MONOOCTYL ETHER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAB CAD 32M sing 1 n n OAV CAL 32M sing 2 n n OAV CAJ 32M sing 3 n n CAD CAJ 32M sing 4 n n CAL CAN 32M sing 5 n n CAN OAX 32M sing 6 n n OAX CAP 32M sing 7 n n CAP CAR 32M sing 8 n n CAR OAZ 32M sing 9 n n OAZ CAT 32M sing 10 n n CAT CAU 32M sing 11 n n CAU OBA 32M sing 12 n n OBA CAS 32M sing 13 n n CAS CAQ 32M sing 14 n n OAY CAQ 32M sing 15 n n OAY CAO 32M sing 16 n n CAO CAM 32M sing 17 n n CAM OAW 32M sing 18 n n CAK OAW 32M sing 19 n n CAK CAI 32M sing 20 n n CAI CAH 32M sing 21 n n CAH CAG 32M sing 22 n n CAG CAF 32M sing 23 n n CAF CAE 32M sing 24 n n CAE CAC 32M sing 25 n n CAC CAA 32M sing 26 n n CAA H1 32M sing 27 n n CAA H2 32M sing 28 n n CAA H3 32M sing 29 n n CAC H4 32M sing 30 n n CAC H5 32M sing 31 n n CAE H6 32M sing 32 n n CAE H7 32M sing 33 n n CAF H8 32M sing 34 n n CAF H9 32M sing 35 n n CAG H10 32M sing 36 n n CAG H11 32M sing 37 n n CAH H12 32M sing 38 n n CAH H13 32M sing 39 n n CAI H14 32M sing 40 n n CAI H15 32M sing 41 n n CAK H16 32M sing 42 n n CAK H17 32M sing 43 n n CAM H18 32M sing 44 n n CAM H19 32M sing 45 n n CAO H20 32M sing 46 n n CAO H21 32M sing 47 n n CAQ H22 32M sing 48 n n CAQ H23 32M sing 49 n n CAS H24 32M sing 50 n n CAS H25 32M sing 51 n n CAU H26 32M sing 52 n n CAU H27 32M sing 53 n n CAT H28 32M sing 54 n n CAT H29 32M sing 55 n n CAR H30 32M sing 56 n n CAR H31 32M sing 57 n n CAP H32 32M sing 58 n n CAP H33 32M sing 59 n n CAN H34 32M sing 60 n n CAN H35 32M sing 61 n n CAL H36 32M sing 62 n n CAL H37 32M sing 63 n n CAJ H38 32M sing 64 n n CAJ H39 32M sing 65 n n CAD H40 32M sing 66 n n CAD H41 32M sing 67 n n OAB H42 32M sing 68 n n # _atom_sites.entry_id 4ZGM _atom_sites.fract_transf_matrix[1][1] 0.010459 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02343 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 32M A 1 201 1 32M DET . D 3 32M B 1 101 2 32M DET . E 4 HOH A 1 301 89 HOH HOH . E 4 HOH A 2 302 64 HOH HOH . E 4 HOH A 3 303 80 HOH HOH . E 4 HOH A 4 304 65 HOH HOH . E 4 HOH A 5 305 14 HOH HOH . E 4 HOH A 6 306 31 HOH HOH . E 4 HOH A 7 307 75 HOH HOH . E 4 HOH A 8 308 58 HOH HOH . E 4 HOH A 9 309 77 HOH HOH . E 4 HOH A 10 310 9 HOH HOH . E 4 HOH A 11 311 44 HOH HOH . E 4 HOH A 12 312 37 HOH HOH . E 4 HOH A 13 313 68 HOH HOH . E 4 HOH A 14 314 48 HOH HOH . E 4 HOH A 15 315 28 HOH HOH . E 4 HOH A 16 316 76 HOH HOH . E 4 HOH A 17 317 11 HOH HOH . E 4 HOH A 18 318 25 HOH HOH . E 4 HOH A 19 319 1 HOH HOH . E 4 HOH A 20 320 4 HOH HOH . E 4 HOH A 21 321 7 HOH HOH . E 4 HOH A 22 322 79 HOH HOH . E 4 HOH A 23 323 30 HOH HOH . E 4 HOH A 24 324 66 HOH HOH . E 4 HOH A 25 325 18 HOH HOH . E 4 HOH A 26 326 16 HOH HOH . E 4 HOH A 27 327 2 HOH HOH . E 4 HOH A 28 328 42 HOH HOH . E 4 HOH A 29 329 35 HOH HOH . E 4 HOH A 30 330 56 HOH HOH . E 4 HOH A 31 331 70 HOH HOH . E 4 HOH A 32 332 20 HOH HOH . E 4 HOH A 33 333 59 HOH HOH . E 4 HOH A 34 334 92 HOH HOH . E 4 HOH A 35 335 26 HOH HOH . E 4 HOH A 36 336 10 HOH HOH . E 4 HOH A 37 337 23 HOH HOH . E 4 HOH A 38 338 12 HOH HOH . E 4 HOH A 39 339 74 HOH HOH . E 4 HOH A 40 340 5 HOH HOH . E 4 HOH A 41 341 39 HOH HOH . E 4 HOH A 42 342 62 HOH HOH . E 4 HOH A 43 343 90 HOH HOH . E 4 HOH A 44 344 29 HOH HOH . E 4 HOH A 45 345 34 HOH HOH . E 4 HOH A 46 346 78 HOH HOH . E 4 HOH A 47 347 15 HOH HOH . E 4 HOH A 48 348 19 HOH HOH . E 4 HOH A 49 349 63 HOH HOH . E 4 HOH A 50 350 67 HOH HOH . E 4 HOH A 51 351 45 HOH HOH . E 4 HOH A 52 352 3 HOH HOH . E 4 HOH A 53 353 24 HOH HOH . E 4 HOH A 54 354 22 HOH HOH . E 4 HOH A 55 355 13 HOH HOH . E 4 HOH A 56 356 17 HOH HOH . E 4 HOH A 57 357 43 HOH HOH . E 4 HOH A 58 358 54 HOH HOH . E 4 HOH A 59 359 83 HOH HOH . E 4 HOH A 60 360 69 HOH HOH . E 4 HOH A 61 361 33 HOH HOH . E 4 HOH A 62 362 8 HOH HOH . E 4 HOH A 63 363 72 HOH HOH . E 4 HOH A 64 364 53 HOH HOH . E 4 HOH A 65 365 73 HOH HOH . E 4 HOH A 66 366 46 HOH HOH . E 4 HOH A 67 367 91 HOH HOH . E 4 HOH A 68 368 86 HOH HOH . E 4 HOH A 69 369 71 HOH HOH . E 4 HOH A 70 370 82 HOH HOH . E 4 HOH A 71 371 81 HOH HOH . E 4 HOH A 72 372 84 HOH HOH . E 4 HOH A 73 373 93 HOH HOH . E 4 HOH A 74 374 57 HOH HOH . E 4 HOH A 75 375 40 HOH HOH . F 4 HOH B 1 201 87 HOH HOH . F 4 HOH B 2 202 60 HOH HOH . F 4 HOH B 3 203 50 HOH HOH . F 4 HOH B 4 204 6 HOH HOH . F 4 HOH B 5 205 38 HOH HOH . F 4 HOH B 6 206 41 HOH HOH . F 4 HOH B 7 207 36 HOH HOH . F 4 HOH B 8 208 55 HOH HOH . F 4 HOH B 9 209 51 HOH HOH . F 4 HOH B 10 210 61 HOH HOH . F 4 HOH B 11 211 88 HOH HOH . F 4 HOH B 12 212 27 HOH HOH . F 4 HOH B 13 213 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 32M . . . C 3 3.1 54.455 -5.771 1 27.9 ? CAA 32M 201 A 1 HETATM 2 C CAC 32M . . . C 3 1.798 54.533 -5.016 1 38.26 ? CAC 32M 201 A 1 HETATM 3 C CAE 32M . . . C 3 1.078 55.836 -5.303 1 44.71 ? CAE 32M 201 A 1 HETATM 4 C CAF 32M . . . C 3 0.143 56.198 -4.158 1 40.26 ? CAF 32M 201 A 1 HETATM 5 C CAG 32M . . . C 3 -0.578 57.505 -4.45 1 41.61 ? CAG 32M 201 A 1 HETATM 6 C CAH 32M . . . C 3 -1.068 58.134 -3.153 1 38.44 ? CAH 32M 201 A 1 HETATM 7 C CAI 32M . . . C 3 -1.957 59.328 -3.452 1 38.06 ? CAI 32M 201 A 1 HETATM 8 C CAK 32M . . . C 3 -1.216 60.561 -3.968 1 42.94 ? CAK 32M 201 A 1 HETATM 9 O OAW 32M . . . C 3 -2.256 61.384 -4.486 1 46.44 ? OAW 32M 201 A 1 HETATM 10 C CAM 32M . . . C 3 -1.961 62.726 -4.889 1 50.21 ? CAM 32M 201 A 1 HETATM 11 C CAO 32M . . . C 3 -3.219 63.177 -5.649 1 55.04 ? CAO 32M 201 A 1 HETATM 12 O OAY 32M . . . C 3 -3.035 63.33 -7.065 1 63.68 ? OAY 32M 201 A 1 HETATM 13 C CAQ 32M . . . C 3 -4.276 63.396 -7.786 1 52.81 ? CAQ 32M 201 A 1 HETATM 14 C CAS 32M . . . C 3 -5.1 64.631 -7.399 1 77.1 ? CAS 32M 201 A 1 HETATM 15 O OBA 32M . . . C 3 -5.882 64.439 -6.208 1 74.42 ? OBA 32M 201 A 1 HETATM 16 C CAU 32M . . . C 3 -7.229 63.986 -6.446 1 68.26 ? CAU 32M 201 A 1 HETATM 17 C CAT 32M . . . C 3 -8.188 65.09 -6.947 1 72.22 ? CAT 32M 201 A 1 HETATM 18 O OAZ 32M . . . C 3 -9.477 64.544 -7.302 1 77.36 ? OAZ 32M 201 A 1 HETATM 19 C CAR 32M . . . C 3 -10.63 65.157 -6.693 1 71.01 ? CAR 32M 201 A 1 HETATM 20 C CAP 32M . . . C 3 -10.665 64.881 -5.184 1 56.75 ? CAP 32M 201 A 1 HETATM 21 O OAX 32M . . . C 3 -11.91 64.378 -4.666 1 39.71 ? OAX 32M 201 A 1 HETATM 22 C CAN 32M . . . C 3 -13.005 65.256 -4.307 1 54.96 ? CAN 32M 201 A 1 HETATM 23 C CAL 32M . . . C 3 -12.618 66.722 -4.108 1 73.17 ? CAL 32M 201 A 1 HETATM 24 O OAV 32M . . . C 3 -12.264 67.279 -5.377 1 96.61 ? OAV 32M 201 A 1 HETATM 25 C CAJ 32M . . . C 3 -11.264 68.301 -5.319 1 86.06 ? CAJ 32M 201 A 1 HETATM 26 C CAD 32M . . . C 3 -10.915 68.75 -6.738 1 81.44 ? CAD 32M 201 A 1 HETATM 27 O OAB 32M . . . C 3 -11.287 70.116 -6.952 1 84.14 ? OAB 32M 201 A 1 HETATM 28 H H1 32M . . . C 3 3.58 53.536 -5.552 1 33.48 ? H1 32M 201 A 1 HETATM 29 H H2 32M . . . C 3 3.726 55.258 -5.481 1 33.48 ? H2 32M 201 A 1 HETATM 30 H H3 32M . . . C 3 2.909 54.513 -6.811 1 33.48 ? H3 32M 201 A 1 HETATM 31 H H4 32M . . . C 3 1.161 53.695 -5.303 1 45.91 ? H4 32M 201 A 1 HETATM 32 H H5 32M . . . C 3 1.994 54.455 -3.945 1 45.91 ? H5 32M 201 A 1 HETATM 33 H H6 32M . . . C 3 1.809 56.635 -5.444 1 53.65 ? H6 32M 201 A 1 HETATM 34 H H7 32M . . . C 3 0.503 55.74 -6.227 1 53.65 ? H7 32M 201 A 1 HETATM 35 H H8 32M . . . C 3 -0.589 55.4 -4.018 1 48.31 ? H8 32M 201 A 1 HETATM 36 H H9 32M . . . C 3 0.717 56.295 -3.234 1 48.31 ? H9 32M 201 A 1 HETATM 37 H H10 32M . . . C 3 -1.427 57.317 -5.11 1 49.93 ? H10 32M 201 A 1 HETATM 38 H H11 32M . . . C 3 0.101 58.194 -4.958 1 49.93 ? H11 32M 201 A 1 HETATM 39 H H12 32M . . . C 3 -1.627 57.395 -2.576 1 46.13 ? H12 32M 201 A 1 HETATM 40 H H13 32M . . . C 3 -0.212 58.454 -2.555 1 46.13 ? H13 32M 201 A 1 HETATM 41 H H14 32M . . . C 3 -2.703 59.032 -4.193 1 45.68 ? H14 32M 201 A 1 HETATM 42 H H15 32M . . . C 3 -2.497 59.599 -2.542 1 45.68 ? H15 32M 201 A 1 HETATM 43 H H16 32M . . . C 3 -0.687 61.066 -3.156 1 51.53 ? H16 32M 201 A 1 HETATM 44 H H17 32M . . . C 3 -0.506 60.29 -4.752 1 51.53 ? H17 32M 201 A 1 HETATM 45 H H18 32M . . . C 3 -1.784 63.362 -4.02 1 60.25 ? H18 32M 201 A 1 HETATM 46 H H19 32M . . . C 3 -1.085 62.751 -5.541 1 60.25 ? H19 32M 201 A 1 HETATM 47 H H20 32M . . . C 3 -4.014 62.449 -5.475 1 66.05 ? H20 32M 201 A 1 HETATM 48 H H21 32M . . . C 3 -3.557 64.129 -5.234 1 66.05 ? H21 32M 201 A 1 HETATM 49 H H22 32M . . . C 3 -4.069 63.422 -8.858 1 63.38 ? H22 32M 201 A 1 HETATM 50 H H23 32M . . . C 3 -4.859 62.495 -7.582 1 63.38 ? H23 32M 201 A 1 HETATM 51 H H24 32M . . . C 3 -4.425 65.476 -7.249 1 92.52 ? H24 32M 201 A 1 HETATM 52 H H25 32M . . . C 3 -5.767 64.887 -8.225 1 92.52 ? H25 32M 201 A 1 HETATM 53 H H26 32M . . . C 3 -7.204 63.18 -7.182 1 81.91 ? H26 32M 201 A 1 HETATM 54 H H27 32M . . . C 3 -7.628 63.567 -5.519 1 81.91 ? H27 32M 201 A 1 HETATM 55 H H28 32M . . . C 3 -8.315 65.842 -6.166 1 86.66 ? H28 32M 201 A 1 HETATM 56 H H29 32M . . . C 3 -7.75 65.582 -7.818 1 86.66 ? H29 32M 201 A 1 HETATM 57 H H30 32M . . . C 3 -11.538 64.766 -7.155 1 85.21 ? H30 32M 201 A 1 HETATM 58 H H31 32M . . . C 3 -10.603 66.235 -6.865 1 85.21 ? H31 32M 201 A 1 HETATM 59 H H32 32M . . . C 3 -10.422 65.807 -4.658 1 68.1 ? H32 32M 201 A 1 HETATM 60 H H33 32M . . . C 3 -9.877 64.164 -4.946 1 68.1 ? H33 32M 201 A 1 HETATM 61 H H34 32M . . . C 3 -13.46 64.888 -3.385 1 65.95 ? H34 32M 201 A 1 HETATM 62 H H35 32M . . . C 3 -13.768 65.2 -5.086 1 65.95 ? H35 32M 201 A 1 HETATM 63 H H36 32M . . . C 3 -13.458 67.274 -3.68 1 87.8 ? H36 32M 201 A 1 HETATM 64 H H37 32M . . . C 3 -11.773 66.794 -3.421 1 87.8 ? H37 32M 201 A 1 HETATM 65 H H38 32M . . . C 3 -11.635 69.15 -4.742 1 103.27 ? H38 32M 201 A 1 HETATM 66 H H39 32M . . . C 3 -10.37 67.916 -4.823 1 103.27 ? H39 32M 201 A 1 HETATM 67 H H40 32M . . . C 3 -9.842 68.635 -6.903 1 97.73 ? H40 32M 201 A 1 HETATM 68 H H41 32M . . . C 3 -11.435 68.115 -7.458 1 97.73 ? H41 32M 201 A 1 HETATM 69 H H42 32M . . . C 3 -10.815 70.68 -6.324 1 100.97 ? H42 32M 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 69 #